Bos indicus (zebu cattle): 109553458
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Entry
109553458 CDS
T04792
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109553458 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109553458 (LSM1)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109553458 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
109553458 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
109553458
NCBI-ProteinID:
XP_019809039
UniProt:
A0A6P5BHT2
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Position
27:complement(35564627..35575093)
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDR
GLSIPRADTLEEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatgcctggcaccgccagcctcatcgaggacatcgacaaaaagcacttggtc
ctgcttcgagatggaaggacacttataggctttttgagaagcattgatcaatttgctaac
ttagtgctacatcagactgtggagcgtattcatgtgggcaaaaaatacggtgatattcct
cgagggatttttgtggtcagaggagaaaatgtggtcctgctaggagaaatagacttagaa
aaggagagtgacacacctctccagcaagtgtctattgaagaaatcttagaagaacagagg
gtggaacagcagaccaagctggaagccgagaagctgaaagtccaggccctgaaggatcga
ggcctgtccatccctcgggcagatactcttgaggagtattaa
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