Bos indicus (zebu cattle): 109554074
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Entry
109554074 CDS
T04792
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109554074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
biu03041
]
109554074
Spliceosome [BR:
biu03041
]
Complex A
Other components
Complex A specific factors
109554074
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
zf-CCHC_5
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
109554074
NCBI-ProteinID:
XP_019809942
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All DBs
Position
29:complement(44898256..44910087)
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AA seq
545 aa
AA seq
DB search
MEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPI
YNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDE
YPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHAL
VTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQ
SSETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEAPVP
ASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGG
PGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPP
MGKSVPGKYACGLWGLSPASRKRYDAAATYGHDATAAAASXXXXSAPSLWSSSPMATAAA
AASATPSAQQQYGFQYPLAMAAKIPPRGGDGPSHESEDFPRPLVTLPGRQPQQRPWWTGW
FGKAA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaagacggtgattccaggaatgcctacagtcatcccccctggacttactcgg
gaacaagaaagagcttatatagtgcaactgcagatagaagacctgactcgtaaactgcgc
acaggagacctgggcatcccccctaaccctgaggacaggtccccttcccctgagcccatc
tacaatagtgaggggaagaggcttaacactcgcgagttccgcacccgcaagaaactggag
gaggaacggcataatctcatcacggaaatggttgccctcaaccccgatttcaagcctcct
gcagattacaaacctccagcaacacgtgtgagcgataaagtaatgatcccacaagatgag
tatccggaaatcaattttgtggggctgctgattgggccaagagggaacaccttgaagaac
atagagaaggagtgtaatgccaagatcatgatccgggggaaaggttctgtgaaagaaggg
aaagttgggcgcaaagatggccagatgctgccaggagaagatgagccgcttcacgccctg
gtcactgccaataccatggagaatgtgaagaaagcagtagaacagataagaaacattctg
aagcagggtatcgagacccctgaggaccagaatgacctacggaagatgcaacttcgagag
ttggctcgcttgaatgggacccttcgggaagatgataacaggatcttaagaccctggcag
agctctgagacccgcagcattaccaataccacagtctgtaccaagtgtggcggggctggc
cacattgcttctgattgcaagttccaaaggcctggtgacccccagtcagctcaggataaa
gcacggatggataaagaatacttgtcccttatggctgaactgggggaggcacctgtgccc
gcatctgtgggctccacctctgggcctgccaccacaccactggccagtgcacctcggcct
gctgctcctgccaacaacccacctccgccgtctctcatgtccactacccagagccgccca
ccctggatgaactccggcccgtcagagagtcggccctaccatggcatgcatggaggtggc
cccggtgggcccggaggtggcccccacagcttcccacacccgctgcccagcctcacaggt
ggacatggtggacatcccatgcagcacaaccctaatggacctccacccccctggatgcag
ccgccaccaccaccgatgaaccagggcccccacccacctgggcaccacggccctcctcca
atgggtaaatcagtacctgggaagtacgcctgtgggctctggggtctatcgcctgcatca
aggaaaaggtatgatgccgccgccacctatgggcatgatgccaccgccgccgccgcctcc
cannnnnnnnnctccgccccctccctctggtcctcttcccccatggcaacagcagcagca
gcagcctccgccaccccctccgcccagcagcagtatggcttccagtacccccttgccatg
gcagcaaagatccctccccgcggcggcgatggcccgagccatgagagtgaggactttccg
cgcccattggtgacccttccaggcagacagcctcagcagcgcccctggtggacaggatgg
ttcggcaaagcagcctga
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