KEGG   Bos indicus (zebu cattle): 109554074
Entry
109554074         CDS       T04792                                 
Name
(RefSeq) splicing factor 1 isoform X1
  KO
K13095  splicing factor 1
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109554074
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:biu03041]
    109554074
Spliceosome [BR:biu03041]
 Complex A
  Other components
   Complex A specific factors
    109554074
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP KH_1 zf-CCHC KH_12 zf-CCHC_3 zf-CCHC_5 KH_NusA_1st
Other DBs
NCBI-GeneID: 109554074
NCBI-ProteinID: XP_019809942
LinkDB
Position
29:complement(44898256..44910087)
AA seq 545 aa
MEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPI
YNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDE
YPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHAL
VTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQ
SSETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEAPVP
ASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGG
PGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPP
MGKSVPGKYACGLWGLSPASRKRYDAAATYGHDATAAAASXXXXSAPSLWSSSPMATAAA
AASATPSAQQQYGFQYPLAMAAKIPPRGGDGPSHESEDFPRPLVTLPGRQPQQRPWWTGW
FGKAA
NT seq 1638 nt   +upstreamnt  +downstreamnt
atggaacagaagacggtgattccaggaatgcctacagtcatcccccctggacttactcgg
gaacaagaaagagcttatatagtgcaactgcagatagaagacctgactcgtaaactgcgc
acaggagacctgggcatcccccctaaccctgaggacaggtccccttcccctgagcccatc
tacaatagtgaggggaagaggcttaacactcgcgagttccgcacccgcaagaaactggag
gaggaacggcataatctcatcacggaaatggttgccctcaaccccgatttcaagcctcct
gcagattacaaacctccagcaacacgtgtgagcgataaagtaatgatcccacaagatgag
tatccggaaatcaattttgtggggctgctgattgggccaagagggaacaccttgaagaac
atagagaaggagtgtaatgccaagatcatgatccgggggaaaggttctgtgaaagaaggg
aaagttgggcgcaaagatggccagatgctgccaggagaagatgagccgcttcacgccctg
gtcactgccaataccatggagaatgtgaagaaagcagtagaacagataagaaacattctg
aagcagggtatcgagacccctgaggaccagaatgacctacggaagatgcaacttcgagag
ttggctcgcttgaatgggacccttcgggaagatgataacaggatcttaagaccctggcag
agctctgagacccgcagcattaccaataccacagtctgtaccaagtgtggcggggctggc
cacattgcttctgattgcaagttccaaaggcctggtgacccccagtcagctcaggataaa
gcacggatggataaagaatacttgtcccttatggctgaactgggggaggcacctgtgccc
gcatctgtgggctccacctctgggcctgccaccacaccactggccagtgcacctcggcct
gctgctcctgccaacaacccacctccgccgtctctcatgtccactacccagagccgccca
ccctggatgaactccggcccgtcagagagtcggccctaccatggcatgcatggaggtggc
cccggtgggcccggaggtggcccccacagcttcccacacccgctgcccagcctcacaggt
ggacatggtggacatcccatgcagcacaaccctaatggacctccacccccctggatgcag
ccgccaccaccaccgatgaaccagggcccccacccacctgggcaccacggccctcctcca
atgggtaaatcagtacctgggaagtacgcctgtgggctctggggtctatcgcctgcatca
aggaaaaggtatgatgccgccgccacctatgggcatgatgccaccgccgccgccgcctcc
cannnnnnnnnctccgccccctccctctggtcctcttcccccatggcaacagcagcagca
gcagcctccgccaccccctccgcccagcagcagtatggcttccagtacccccttgccatg
gcagcaaagatccctccccgcggcggcgatggcccgagccatgagagtgaggactttccg
cgcccattggtgacccttccaggcagacagcctcagcagcgcccctggtggacaggatgg
ttcggcaaagcagcctga

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