Bos indicus (zebu cattle): 109554563
Help
Entry
109554563 CDS
T04792
Symbol
HPS5
Name
(RefSeq) Hermansky-Pudlak syndrome 5 protein
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109554563 (HPS5)
Membrane trafficking [BR:
biu04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
109554563 (HPS5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
109554563
NCBI-ProteinID:
XP_019810714
UniProt:
A0A6P5BKK4
LinkDB
All DBs
Position
29:27633007..27677223
Genome browser
AA seq
1130 aa
AA seq
DB search
MTFVPVIPESYSHVLAEFESLDPLLSALRLDSTRLKCTSIAVSRKWLALGSSGGGLNLIQ
KEGWKHRLFLSHREGAISQIACCLHDDDYVAVATSQGLVVVWELNQERRGKPERIYVSSE
HKGRKITALCWDTAILRIFVGDHLGKVSAIKLNTSKQAKAAAAFVMFPVQTITTVDSCVV
QLDYLDGRLLVSSLTRSFLCDTEREKFWKIGNKERDGEYGACFFPGRCSAGQQPLIYCAR
PGSRMWEVNFDGEVLSTHQFKKLLSSPPLPVINLRSEPQYDHTIGSSQSLSFPKLLHISE
HCVLTWTERGIYIFIPQNVQVLLWSEVKDIQDVAVCKNELFCLHLNGKVSHXSLLSVERC
VERLLRRGLWNLAARTCCLFQNSVIASRGRKTLTVDKLEHLKSQLDLTTYGDLISQLEEL
ILKLEPLDSACSSRRSSISSHESFSILDSGIYRIINSRRGSQSDEDSCSLHSQTLSEDER
LKEFASHQEEDQPDHCCGSQGSEDNVSHASVTFETDKSETFLPFXIPLSFRSPSPLVSLQ
AVKESVSSFVRKTTEKIGTLHTSPDLKVRQEPRGDEQSCEEDVSPVTCPKEEDIEGKEEI
TSHPPEEDKFQELTMATAEAMSKLQDPLVLFEPKSLRMVLREWLSQLEKTFAVKDFSGIS
DTGSSSVESNQDMQLLDESRKGILDEEYEKEERDSLGNEETIDQTACESVNSLREPLDDD
VFQICSPWSIADSLQKDLAELTTLCLELSVLNSEIKSASGHGDHTLQQCSLEMLTCQFLK
KYFFLLDLKRAKESIKLSYPKSPCVWDTFIEGLKEMVSSSPTHIKMEEGDLPTRLKLLED
SVPFDSPLLIAYAARLYEKFGESALRSLIRFYPSILPSDVMQLCHHNPVQFLTYLDSLVK
SRPEDQRPSFLESLLQPESLRLDWLLLAVSHDAPPSTSTMDDEGNPRPHSHLFSWGYSQL
ILHLIKLPADFTTKEKMTDICRSHGFWPGYLILCLELERRREAFTNIVYLNDMSLMEGDN
GWIPETVEEWKLLLHLVQNTSTKPAPQQSPDGNFSDGPSPITVENVALLLAKAMGPDRAW
SLLQECGLTLDLSERFTRTCDILRIAEKRQRALIQSMLEKCDRFLWSQQA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgtgccagtgataccagagtcctacagccatgttcttgcagaatttgagtct
ctggatccattactttcagccctgaggctggactccactcgtctaaagtgcacgagcata
gccgtgtctcgaaaatggttggctttgggcagttcaggaggaggactcaacctcattcag
aaagaaggctggaagcacaggctttttctttctcacagggaaggtgcaatttctcagata
gcctgctgtttacatgatgatgattatgttgctgtggctaccagtcaaggtcttgtagtt
gtttgggaattaaatcaagagcgtcgcgggaagccagaacgaatttatgtgtcttcagaa
cacaaaggccgaaaaattacagctctctgttgggatacagctattcttagaatatttgta
ggtgatcatctggggaaagtttctgccatcaaactcaacacttctaagcaagcaaaggca
gctgctgcctttgtgatgtttcctgttcagacaataacgacagttgattcctgtgttgtc
cagttagattatttggatggaagactccttgtatcttcgcttactcgatccttcttgtgt
gacactgagagagaaaaattttggaaaattggaaacaaggaaagagatggagaatatgga
gcttgtttcttcccgggaaggtgttctgcaggccagcagcccctaatatactgtgctcgc
cctggctccaggatgtgggaggtgaactttgatggagaagttttaagcacacatcagttt
aagaaactcctctcctcaccacctcttcctgtgattaatctaagatcagaacctcagtat
gatcatacgattggatcctcccagtctttgtctttccccaaactcttacatattagtgag
cattgtgtgctgacttggacagaaagaggaatttatattttcattcctcagaatgttcaa
gttcttctttggagtgaagtcaaagatattcaggatgtggctgtttgcaagaacgagctg
ttctgtctgcacctgaatgggaaggtctcacatytctccctgttgtctgtggagcgctgt
gtggaacgtctgctaaggagaggcctgtggaacctggctgctcgaacttgctgtcttttc
caaaattctgtcattgccagcagaggaagaaaaactttaactgtagataaattggaacac
ttgaaatctcagctagacttaacaacctatggtgatctaatttcccaactggaagagttg
atcttaaaattggaacctttggattcagcctgtagcagtagaagaagctccatttcatca
catgaaagtttcagcatcttggactctggtatttatcgtatcattaatagtagaagaggc
agtcagtcagatgaagactcttgttcccttcacagccagacactctccgaagatgagaga
cttaaagaatttgcctcacatcaagaagargaccagccagatcattgctgtggctcccag
ggaagtgaagataatgtttctcaygcatcagtgacatttgagacggataaaagtgaaact
tttctccccttcrgcattccattatcatttcgttctccatctcctcttgtgtctcttcag
gctgtcaaggagagtgtttccagctttgtgcgtaaaactactgagaagattggcaccctt
catacaagccctgatctgaaagtgagacaagaacctaggggtgatgagcagtcctgtgaa
gaggatgtgagtccagtcacttgcccaaaggaggaagacattgaaggaaaagaagaaata
actagtcaccctccagaagaggacaagttccaagagctcacaatggcaacagcagaagca
atgagcaagctacaggacccactggttttatttgaaccgaagtccctgagaatggtttta
cgggagtggctttcacagttagaaaagacatttgccgtgaaggacttttcaggcatttcr
gatactggcagctcatccgtggaatcaaaccaggatatgcaattgcttgatgagtcaaga
aagggaatattagatgaagaatatgaaaaagaagaaagggactctttaggcaatgaagaa
actattgatcaaacagcatgtgaatctgtaaatagtctgagggagcccttggatgatgac
gttttccaaatatgttctccttggagtatagcagacagtcttcagaaggatctggctgaa
ttgacaacattgtgtttggaattgagtgtgttgaattctgagatcaaaagtgccagtgga
catggcgaccacactttgcagcagtgctctcttgaaatgctgacttgtcagttcctaaag
aagtacttttttcttctggatttgaaaagagcaaaggagagcatcaagctgagttaccct
aaaagtccttgtgtttgggatacttttattgaaggattgaaagaaatggtgagttccagt
ccgacacatataaagatggaagaaggagaccttccaacaagattaaagttattggaggac
tctgttccttttgacagtcctttgttgattgcatatgctgcccgattgtatgagaarttt
ggagaatcagcccttcgatccttaatcaggttttacccatccattttgccttcagatgtc
atgcaactttgtcatcataatcctgttcagtttttgacctatttagacagtctggtgaaa
tcaaggcccgaagatcaacggccrtccttycttgagtcccttctacagccagagtcttta
aggttggattggctgctgttggctgtgtcccatgatgctcccccaagcaccagcactatg
gatgatgaaggaaaccccaggcctcattctcacttgttttcctggggttacagtcagctc
atccttcatctgattaaacttcctgcagattttacaacaaaagagaaaatgactgacatc
tgtaggtctcatggtttctggcctggatatcttattctctgtttggagctggagagaaga
agagaggccttcaccaacattgtgtatctgaatgatatgagcctgatggaaggggacaat
ggttggatcccagaaactgtggaagaatggaagcttctcctacatctggtgcagaacaca
agcacaaagccagccccccagcagtcaccagatggaaacttcagcgatgggccttcccct
atcactgtggagaacgtggccctcctattagctaaggccatgggcccagaccgggcctgg
tcactgctccaggaatgtggtttgaccctggacctgtcagagaggtttaccagaacctgc
gatatcctgagaattgccgagaaaaggcagagagccttgatacaaagcatgctcgaaaaa
tgtgatcggtttctgtggtctcaacaggcctag
DBGET
integrated database retrieval system
