Bos indicus (zebu cattle): 109554829
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Entry
109554829 CDS
T04792
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 3-like
KO
K14284
nuclear RNA export factor
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03008
Ribosome biogenesis in eukaryotes
biu03013
Nucleocytoplasmic transport
biu03015
mRNA surveillance pathway
biu05014
Amyotrophic lateral sclerosis
biu05164
Influenza A
biu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109554829
03015 mRNA surveillance pathway
109554829
03008 Ribosome biogenesis in eukaryotes
109554829
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
109554829
05168 Herpes simplex virus 1 infection
109554829
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
109554829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109554829
03009 Ribosome biogenesis [BR:
biu03009
]
109554829
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109554829
mRNA cycle factors
Stress granule specific factors
109554829
Ribosome biogenesis [BR:
biu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
109554829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
NTF2
Motif
Other DBs
NCBI-GeneID:
109554829
NCBI-ProteinID:
XP_019811008
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All DBs
Position
X:34392993..34399932
Genome browser
AA seq
553 aa
AA seq
DB search
MILEXTDKVNLLQRRAQSWGIYQRQHKYWSEQVTSQQHHCFPSEAXDAHMDNQARHAPYA
IPPHHQRSGFQKQDQMHXNMETKQKPPERRMERNRQDKTFGSWFKIIIAFGIKYDEKWLL
NCILKQFSVPFILVKSGLMFCFSCHSEKMQAQFFVENVNIACALKNVNSKIFSEDNERIS
IFVEPCDTPQSVQKALKSEKVGQYTSVDPLSLSPSSWLPGDLITCHIGMTQNCRNGMAAS
LHIHSAIMPKLLSLDLSNKKPYLVHGLSTLXENASTKNLNLSNTEVKASGEMXNSQQLEP
EGMCADRNTVCTAFRDNHTILELFPRLKSLDGQETLSGSKCAVEAPKCLPMXKGSFFGSD
QVXSQILQFLQHYYLIHDYGDXXXLLGFYHEEACFFLTIPFHSKDSGLSSMXAHFLDNRN
MKMLKDPNPXVQMMKHTKHDIVRALCALPKTQHDFSSFEVDTPAXRLETMFCFSVSGVFK
EVEGISQGCVCAFTXTFTTTPTSSSSLCIVNEELFVREASPSEAQRLHSPSQCLHCRPRS
CSASPLSSRKWSF
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgattttagagcrcactgataaagtgaaccttttacaaagaagagcacaaagctggggt
atttaccaaaggcaacacaaatattggtctgaacaggtcacttcccagcagcaccattgc
ttcccatcagaagcaygtgatgctcatatggacaaccaagcaagacatgctccatatgcc
attccaccccatcatcagagaagtggttttcagaaacaagaccaaatgcatrttaacatg
gagacaaagcaaaagccyccagagagaagaatggagagaaacagacaggataagaccttt
gggagctggttcaagatcatcattgcytttggtataaaatatgatgagaagtggctgctt
aattgcattctgaagcaattcagtgtgcccttcattctagtcaaatctggtctcatgttc
tgtttctcctgtcactctgagaaaatgcaagcccagttctttgtagagaatgtcaacatt
gcctgtgcattgaagaatgtcaacagcaagattttcagtgaggataatgaaagaatatct
atctttgttgaaccctgtgacacaccccagtctgtgcagaaggcrctgaagtctgaaaag
gtgggacagtacaccagcgtggaccctctcagcttgtctccctcatcctggcttcctgga
gacttgataacctgtcatattggaatgacacagaactgtagaaatggcatggctgcttcc
cttcacatccattcagcaatcatgcccaagcttttgtccttggacctgagcaacaagaag
ccctacctggtgcatggcctgtccaccctantagagaatgcttccaccaaaaacttgaac
ctctccaacactgaggtgaaggcttcaggggagatggrcaacagtcagcagctggaacca
gaagggatgtgtgcagacagaaatactgtgtgcaccgctttccgtgataaccacaccatc
ctggaattgttccccaggttaaaaagcttggatggccaggagacactctcaggttctaaa
tgtgctgtggaagcccccaagtgcttaccaatgygtaagggaagtttctttggctctgat
caggtgaasagtcaaatcctgcaattcctgcagcactattacttgatccatgactatgga
gatcscyaggractgctgggcttttatcatgaggaggcctgcttcttcctgaccattcca
ttccactccaaggactcaggcttaagcagcatgcrtgcgcacttcttggacaacaggaat
atgaagatgctcaaggaccccaacccgygtgtccagatgatgaaacacacaaaacatgac
attgtgcgtgccctctgtgcattacccaaaactcagcatgacttcagctcctttgaggtg
gacacacctgctyctcgcttggaaacgatgttctgcttctctgtcagtggggtgttcaag
gaagtggaaggaatttctcagggctgtgtctgtgccttcaccyggaccttcaccactact
cccaccagctcttccagtctttgtatagtgaatgaagagctgtttgtaagggaagccagt
cccagtgaagctcagcgtctgcattctccatcccagtgcctacactgtcgaccacgttca
tgttccgcctctcccctgagtagcaggaaatggagcttctga
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