Bos indicus (zebu cattle): 109554834
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Entry
109554834 CDS
T04792
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma isoform X1
KO
K08534
RAR-related orphan receptor gamma
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04659
Th17 cell differentiation
biu04710
Circadian rhythm
biu05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
109554834 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
109554834 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
109554834 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109554834 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
biu03310
]
109554834 (RORC)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109554834 (RORC)
Nuclear receptors [BR:
biu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
109554834 (RORC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109554834
NCBI-ProteinID:
XP_019811015
UniProt:
A0A6P5BL51
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Position
3:20463224..20490264
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AA seq
526 aa
AA seq
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MDRAPQRHHRASQGKRPCSLTELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCK
GFFRRSQQCNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD
SLHAEVQKQLQQRQQQQREQAAKTPPMGAQGADTLACTLGLPDGQLPLGSSPDLPEASAC
PPSLLRAPGCGPSYSNSLAKTGLNGASYHLEYSPERGKAEGRENFYGIGSQLAPDRGGLH
SEDPRRPGLGEPGRGLDSYFTPSFRSTPEVPYASLTEIEHLVQNVCKSYRDTCQLRLEDL
LRQRSNIFSREEVAGYQRKSMWEMWGRCAHRLTEAIQYVVEFAKRLPGFMELCQNDQIVL
LKAGAMEVVLVRMCRAYNADNDTVFFEGKYGGVELFRALGCSELISSIFDFSRSLSALRF
SEDEIALYTALVLINANRPGLQEKRKVEQLQCNLELAFHHHLCKTHRQGILAKLPPKGKL
RSLCSQHVEKLQTFQHLHPIVVQAAFPPLYKELFSTEIESPEGLSK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacatcaccgagcctcgcagggtaagaggccctgcagcctt
acagagctgctggctgcaaagaagacccacacctcacaaattgaagtgattccgtgtaaa
atctgtggggacaagtcatctgggatccactacggggttatcacctgtgaggggtgcaag
ggcttcttccgccggagccagcagtgcaacgtggcctactcctgcacccgccagcagaac
tgccccatcgaccgcacgagccgcaaccgatgccagcactgccgcctgcagaagtgcctg
gccctgggcatgtcccgagatgctgtcaagtttggccgcatgtccaagaagcaaagggac
agcctgcatgcagaggtgcagaaacagctgcagcagcggcaacagcagcaacgggaacaa
gcggccaagacccctcccatgggagcccaaggagcagacaccctcgcctgcaccttgggg
ctcccggatgggcagctacccctgggctcctcgcctgacctgccagaggcctcagcctgt
ccccctagtctcctgagggctccaggctgtgggccctcctactccaacagcctggccaag
accgggctcaacggggcctcgtaccacctggaatacagccctgagcggggcaaggctgag
ggcagggagaacttctatggcataggcagccagctggccccagacaggggtggacttcac
tctgaggaccccaggcgtcctgggcttggggagccaggacggggcctggacagctacttc
acccccagtttccgcagcaccccagaggtgccttatgcttccctgacggagattgagcac
ctggtgcagaacgtttgcaagtcctaccgggacacgtgtcagctgcggctggaggacctg
ctccgtcagcgctccaatatcttctcacgagaggaggtggctggctaccagaggaagtcg
atgtgggagatgtggggacgctgtgcccaccgactcaccgaggccattcagtatgtggtg
gagttcgctaagaggctcccgggctttatggagctctgccagaacgaccagatcgtgcta
ctcaaagcaggagccatggaagtggtgctggtcaggatgtgccgggcctacaacgctgac
aatgacacagtcttttttgaaggcaaatacggtggcgtggagctgttccgagccttgggc
tgcagtgaactcatcagctccatctttgacttctcccgctccctgagtgccttgcgcttt
tcagaggacgagatcgccctctacacagccctcgtcctcatcaatgccaaccggccaggg
ctccaagagaaaagaaaagtagaacagctgcagtgcaatctggagctggcctttcatcat
catctctgcaagactcatcgccaaggcatcctggcaaagctgccacccaaggggaagctg
cggagcctgtgtagccagcacgtggaaaagctgcaaaccttccagcatctccaccctatc
gtggtccaagctgctttccctccactctacaaggaactcttcagcactgaaatcgagtca
cccgagggcctgtccaagtga
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