Bos indicus (zebu cattle): 109555135
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Entry
109555135 CDS
T04792
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109555135 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109555135 (ATRX)
03036 Chromosome and associated proteins [BR:
biu03036
]
109555135 (ATRX)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
109555135 (ATRX)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109555135 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
109555135
NCBI-ProteinID:
XP_019811281
UniProt:
A0A6P5B2W1
LinkDB
All DBs
Position
X:44616897..44903197
Genome browser
AA seq
2478 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAHSSEESEETSSPPRLVMNQSTDKASGSGNNSDMMENS
REEGASSAEKSKSSGSSRSKRKPSIVTKYVESDDEKTLDETVNEDASNENSENDITMQSL
PKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQQVNHF
QKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKKIKVD
NEKTSKVYEHAPRFSPKKNSSNCNGEEKKLDDSYSGSVTYSYSALIVPKDMIKKAKKLIE
TTANMNSSYVKFLKQATDNSEINSATKLRQLKAFKSVLADIKKAHLALEEDLNSEIQALD
AVNKEKNTKEHKVIDAKSETKVRKGEKPCVLERKDISKSEGKLSRKQVDSEHIGQSVAVE
EQRAHKNDSTEHKKSDKKEPQYEPSNTAEDLDMDIVSVPSSVPEDIFENLETAMEVQSSA
EYQGDGNSGTEQELETSVKLNITSKDNRGGIKSKTTAKVTKELYVKLTPVSLSISPIKGA
DCQEVPQDKDSYKSSCLNPKPENCELGQEKNDNEHLAKSEVPLLSEESDLRRSPRVKTTP
LRRQTETNRTTSNSDEENNETVKEQQKLSVPMRKKDKRNSSDSAIDNPKPNKLPKSKQSE
IVDHISDSDEMLTILKDMPSMSHSSSDTDINEPHTNNKKTFYSEIQRGKDDKRKRKRKSS
TSGSDFDIKKGKSVKKAIISKKKRQNQSESSNYDSELEKEIKRMSKIGTARTTKKRVPNK
EYYDSSEDEKHSKQGMDNQGHKSLRTAQEGSSDDVERKQERENFSSAEGTVDKDKTIMEL
RDRLSKKQQPNVSSESADKLCSGKEESFNSPEDKKVAESKGKSKHQRTRMCQKILGGLCD
VAEKFSEKEQSDESSEDDNEQSKKEIEEKEKKTADLNKKVMEQEYESSSDTTEKLPEGEE
ICDFPKSIKQNKSSADGEKKCKKIKDKASKKKGELSDNSEKLPGKRESCDSSEDKRSKNG
TSSREKKRFNLPEKSSRKRQDCSSSDTEKYSMKEDDCDFSDKRPKGIELRERRNLNSNRN
SKEVQSGSSSDVEESSEDNKNLKKQRALAKKKAGSIKEKMRNSLRTSTKRKQADITSSSS
DIGDDDQKSVGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDND
PENRIAKKMLLEEIKANLSSDEDGSSDESEEGKKRTGKHNEENPGDEEIKNQAISESDSD
SEESKKPRYRHRLLRHKLTLSDGESGEEKKMKPKEHKEAKSRNRRKVSSEDSEDSDFQES
GVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEDKE
EDEEEDEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAERERERE
KLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCC
CESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWM
NEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNV
KSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNL
IEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCV
QRKDYTALTKFLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQD
FQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDDYTKKKKAKG
KKGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNVDETGNNPSVSLKLEESKATSSSNP
SSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFL
ELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFI
ISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDK
IYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLPKD
TILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFNIPTG
TNLPPVSFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAVRIQPLEDII
SAVWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRILMNRRL
QQQYNQQQQQQMTYQQATLGHLMMPKPPNLIMNPSNYQQIDMRGMYQSVAGGMQPPPLQR
APPPMRSKNPGPSPGKSM
NT seq
7437 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagcccatgagcgaaagcaagttgaatacattggtgcagaagcttcatgac
tttctggcacactcatcagaggaatctgaagaaacaagttctcctccaagacttgtgatg
aaccaaagcacagataaagccagtgggtctggcaataactctgatatgatggaaaacagc
agggaagagggagctagctctgcagaaaaatccaaatcgtcaggatcatcacgatcaaag
aggaaaccttcaattgtaacaaagtatgtagaatctgatgatgaaaaaactttggatgaa
actgtaaatgaagatgcttctaatgaaaattcagaaaatgatattactatgcaaagcttg
ccaaaaggtacagtgattgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcgga
gaagatgggcttcatgggattgtgagctgtacagcttgtggacaacaggtcaatcatttt
caaaaagattccatttatagacatccttcactgcaagtacttatttgtaagaattgcttt
aaatattacatgagtgatgatattagtcgtgactcagatggaatggatgaacagtgtaga
tggtgtgcagaaggtggaaacttaatttgttgtgacttttgccataatgccttctgtaag
aagtgcattcttcgcaaccttggtcgaaaggagctgtctacaataatggatgaaaacaac
caatggtattgctacatttgtcacccagagcctttgttggacttggtcacggcgtgtaac
agcgtatttgaaaacttagaacagttgttgcaacaaaataagaagaagataaaagttgac
aatgaaaagactagtaaagtatatgagcatgcacccagattttctccaaagaaaaacagt
tcaaattgtaatggagaagaaaagaagttagatgattcatattctggttctgtaacctac
tcttattcagcactaattgtgcccaaggacatgattaagaaggcaaaaaaactgattgag
actactgccaacatgaattccagttacgttaaatttttgaagcaggcaacagataattca
gaaatcaattctgctacaaagttacgtcagcttaaggcttttaagtctgtgttggctgat
atcaagaaagctcatcttgcattagaagaagatttgaattcagagattcaagctttggat
gctgtaaacaaagagaaaaataccaaagagcataaagtcatagatgctaagtctgaaaca
aaagtaagaaaaggagaaaaaccttgtgttttggaaaggaaggatatttcaaaatcagaa
ggtaaactgtcaagaaagcaggtggatagtgagcatataggtcagagtgttgcagtagag
gaacaaagagcacataaaaatgacagtactgaacataagaaatctgataaaaaagaacct
cagtatgaacctagtaacactgccgaagacttagacatggatattgtgtctgttccttcc
tcagttccagaagacatttttgaaaatcttgagactgctatggaagttcagagttcagca
gagtatcagggagatggcaacagtggaactgaacaagaactggagacttctgtaaaatta
aatattacttcaaaagacaacagaggaggtattaaatcaaaaacaacagctaaagtaaca
aaagaattatatgttaaactcacccctgtttccctttctatttccccaattaaaggtgct
gattgtcaggaagttccacaagataaagatagctataaaagttcttgtctgaaccctaag
ccagagaactgtgaacttggacaggaaaagaatgataatgagcatttggctaaaagtgaa
gttccgttactttcagaagaatctgatcttcgaagatccccgcgtgtaaagactacacct
ttgaggcgacagacagaaaccaaccgtacaacatctaattcagatgaagaaaataatgaa
acagttaaggagcaacaaaaactttcggttccaatgagaaaaaaggataagcggaattct
tctgacagtgctatagataatcctaaacctaataaattgcctaaatctaagcagtcagag
attgtggatcacatttcagattctgacgaaatgctgacaatcctcaaagacatgcccagt
atgagtcacagttcttcagatactgatattaatgaacctcatacaaataacaagaagact
ttttattcagagattcaaagagggaaagatgataaaagaaaaaggaaacgaaaaagttct
acttctggctcagattttgatattaagaaaggtaaatcagttaaaaaggctataatttct
aaaaagaaacgacaaaaccagtctgaatcttctaattatgactcagaattagaaaaagag
ataaagagaatgagtaaaattgggactgccagaacaaccaaaaaaagagttccaaataaa
gaatattatgattcttctgaagatgaaaaacacagcaaacaaggaatggataatcaaggt
cataaaagtttgaggactgcacaggaaggatcatctgatgatgttgaaaggaaacaagag
agagagaatttctcttcagcagaaggcacagttgataaagacaagaccatcatggaattg
agagatcgcctctctaagaagcagcagcccaatgtttcctcagagagtgctgataagctt
tgttctgggaaagaggagagttttaattctccagaagataaaaaggttgctgaatctaaa
ggaaagagtaagcaccagcgaaccagaatgtgtcagaaaatactgggtggcttatgtgat
gttgctgagaagttctcagagaaagaacagagtgatgaatcctctgaagatgataacgag
cagagcaaaaaggaaattgaagaaaaagaaaagaaaactgcagacttgaataaaaaagtg
atggaacaagagtatgaatcatcatctgatactactgagaaattacctgagggagaagaa
atttgtgactttcctaaaagcataaaacaaaataagagctcagctgatggggaaaagaaa
tgcaaaaaaattaaagataaagcttctaaaaagaagggtgaattatctgataattctgag
aagttaccagggaaaagagaaagttgtgactcttcagaagataagaggagtaagaatgga
acatccagtagagagaagaaaaggttcaacttgcctgaaaagagttcaaggaagagacag
gattgttcatcatctgatacagaaaaatattccatgaaagaagatgattgtgatttttct
gataagagaccaaaaggaatagaattaagggaaagaaggaatttaaattcaaatagaaat
agcaaggaagtacaaagtggctcatcttctgatgttgaggaaagttctgaagataataaa
aacctgaagaaacaaagagctttagctaaaaagaaggcaggcagtataaaggagaaaatg
agaaactccttgagaacaagcactaaaaggaagcaggctgacattacttcctcatcttct
gatataggagatgatgatcagaaatctgtaggtgaggggagcagtgatgagcagaaaatt
aagcctgtgactgaaaatttagtgctgtcgtcacatactggattttgtcaatcttcagga
gatgaagccttatctaaatcagtgcctgtcacagtggatgatgacgacgatgacaatgat
cctgaaaatagaattgccaagaagatgcttttagaagaaattaaagccaatctttcctct
gatgaggatggatcttcagatgagtcagaagaagggaagaaaagaactggaaaacacaat
gaagaaaaccctggagatgaggaaataaaaaatcaagccatttctgaatcagattcagat
tctgaagaatctaagaagccaagatacagacataggcttttgagacacaagctgactctg
agtgatggagaatctggagaagaaaaaaagatgaagcctaaagagcacaaagaagccaaa
agcagaaatagaaggaaggtgagtagtgaagattctgaagattctgattttcaggaatct
ggagttagtgaagaagttagtgaatctgaagatgaacaacggcccagaacaaggtctgcg
aagaaagcagagttggaagaaaatcagagaagttacaaacagaagaagaaaaggcgacgc
attaaagttcaagaagactcatccagtgaaaacaagagtaattctgaagaagataaagaa
gaagatgaagaagaagatgaagaagaagatgaaaatgatgattccaagtctcctggaaaa
ggcagaaagaaaattcggaagattcttaaagatgataagctaagaacagaaacacaaaat
gctcttaaggaagaagaagagaggcgaaaacgtattgctgagcgagagcgagagcgagag
aaattgagagaggtgatagaaattgaagatgcttcaccgactaagtgtccaataacaacg
aagttggttttagatgaagatgaagaaaccaaagaacctttagtgcaggttcatagaaat
atggttatcaaattgaaaccacatcaagtagatggtgttcaatttatgtgggattgctgc
tgtgagtctgtaaaaaaaacaaagaaatctccaggttcaggatgcattcttgcccactgc
atgggacttggtaagactttacaggtggtaagttttcttcatacagttcttttgtgtgac
aaattggatttcagcacagctttagtggtttgtcctcttaatactgctttgaattggatg
aatgaatttgagaagtggcaggagggattaaaagatgatgagaagcttgaggtctctgaa
ttagcaactgtgaaacgtcctcaagaaagaagctacatgctacagaggtggcaagaagat
ggtggtgttatgatcataggctatgagatgtacagaaatcttgctcaaggaaggaatgtg
aagagtaggaaacttaaagaaatatttaacaaagccttggttgatccaggacctgacttt
gttgtttgtgatgaaggccatattctaaaaaatgaagcatctgctgtttcaaaagctatg
aattctatacgatcaaggaggagaattattttaacgggaacaccacttcaaaataaccta
attgagtatcattgcatggttaactttatcaaagaaaatttgcttggatccattaaggaa
ttcaggaatcggtttataaatccaatccaaaatggtcagtgtgcagattctaccatggta
gatgtcagagtaatgaaaaaacgagctcacattctctatgaaatgttagctggatgtgtt
cagaggaaagattatacagcattaacaaagtttttacctccaaagcatgagtatgtttta
gctgtgagaatgactcctattcagtgcaaactctatcagtactacttagatcacttaaca
ggtgtaggtaatagcagcgaaggtggaagaggaaaggcaggtgcaaaacttttccaagat
tttcaaatgttaagtagaatctggactcatccatggtgtttgcagctggactacattagt
aaagaaaataagggatattttgatgaagacagtatggatgaatttatagcttcagattcc
gatgaaacctccatgagtttaagctctgatgattatacaaaaaagaaaaaagcaaagggg
aaaaagggaaaaaaagatagtagctcaagtggaagtggcagtgacaatgatgttgaagtg
attaaagtatggaattcaagatctcgaggaggtggtgaaggaaatgtggatgaaacagga
aayaatccctcagtttctttaaaactggaagaaagtaaagctacttcctcttctaatcca
agcagtccagctccagactggtacaaagattttgttacagatgctgatgctgaggtttta
gagcattctggaaaaatggtacttctctttgaaattcttcgaatggcagaggaaattggg
gataaagtccttgttttcagccagtctctcatatctctggacttgattgaagattttctt
gaattggctagtagggaaaagacagaagataaagataagcctcttatttataaaggtgaa
gggaagtggctcagaaacattgactattaccgtttagatggctctacaactgctcagtca
aggaaaaagtgggctgaagaatttaatgatgaaactaatgtgagaggacgattatttatc
atttctaccaaagcaggatctcttggaattaatctggtagctgctaatcgagtgattata
tttgatgcttcttggaatccatcttatgacatccagagtatattcagagtttatcgcttt
ggacaaactaaacctgtctatgtatataggttcttagctcagggaaccatggaagataag
atttatgatcggcaagtaaccaagcagtcactgtcttttcgagttgttgatcaacagcaa
gttgaacgtcattttaccatgaatgagctgactgaactttatacctttgagccagacttg
ttagatgaccctaattcagaaaagaagaagaaaagggatactcccatgctgccaaaggac
accatacttgcagaacttcttcaaatacataaagaacacattgtaggatatcatgaacat
gattctcttttggaccacaaagaagaagaagagttgactgaagaagaaagaaaagcagct
tgggctgaatatgaagcagagaagaagggactgaccatgcgtttcaacataccaactggg
accaatttaccccctgtcagttttaactctcaaactccttatattcctttcaatttggga
gccctatcagcaatgagtaatcaacagctggaggacctcattaatcaaggaagagaaaaa
gttgtggaagcaacaaacagtgtgacagcagtgaggattcagcctcttgaagatataatt
tcagctgtatggaaggaaaacatgaatctctcagaggcccaggtacaggcattagcatta
agtagacaagccagccaggagcttgatgtcaaacgaagagaggcaatctacaatgacgtg
ttgacaaaacaacagatgttaatcagctgtgttcagcgaatacttatgaaccgaaggctc
cagcaacagtacaatcagcagcagcagcagcaaatgacttatcaacaagcaacactgggt
cacctcatgatgccaaagcctccaaatttaatcatgaatccttctaactaccagcagatt
gatatgagaggaatgtatcagtcggtggctggtggtatgcagccaccaccattacaacgt
gcgccacccccaatgagaagcaaaaatccaggaccttccccagggaaatcaatgtga
DBGET
integrated database retrieval system
