Bos indicus (zebu cattle): 109555171
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Entry
109555171 CDS
T04792
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04110
Cell cycle
biu04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109555171 (SMC1A)
04114 Oocyte meiosis
109555171 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109555171 (SMC1A)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
109555171 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
109555171 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
109555171
NCBI-ProteinID:
XP_019811355
UniProt:
A0A6P5BLQ2
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Position
X:59291170..59338315
Genome browser
AA seq
1238 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSXGTMDDISQEEGSSQGE
DSVSGSQRTSNIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPETFGISFADGPAPDGHSLRHCVFILFFIPLLLF
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctgaagctgattgagatcgagaactttaaatcgtacaagggtcggcagatt
atcggaccatttcagagattcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgccatcagctttgtgttgggtgagaaaaccagcaacctgcgggtaaagacc
ctaagggacctgatccacggagctcctgtgggcaaaccagcagccaaccgagcctttgtc
agcatggtctactctgaagagggtgctgaggaccgcacgtttgcccgtgtcattgttgga
ggttcctccgagtacaagatcaacaacaaagtggtccagctacatgagtacagtgaggaa
ttagagaagttgggcatacttatcaaagctcgtaacttcctcgtcttccagggtgctgtg
gaatctattgccatgaagaaccccaaagagaggacagctctttttgaagagatcagtcgc
tctggggagctggcccaggaatatgacaagcgaaaaaaggaaatggtaaaagctgaagag
gacacacagtttaattaccatcgcaaaaaaaacattgcagctgaacgcaaggaggccaaa
caagaaaaagaagaggctgaccgctaccagcgcctgaaggatgaggtggtgcgagctcag
gtacagttgcagcttttcaaactttatcataacgaagtggaaattgagaagctcaacaaa
gaactggcctctaagaacaaggagatagagaaggacaaaaagcggatggacaaggtagag
gatgagctgaaggagaagaagaaggagctgggcaaaatgatgcgggaacaacagcagatt
gagaaggagatcaaggagaaggactcagagctgaaccagaagcggcctcagtacatcaag
gccaaggaaaatacttcccacaaaatcaagaagttggaagcagccaaaaagtcactacag
aatgctcagaagcattataagaagcgtaaaggtgacatggatgagctggaaaaggagatg
ctgtcagtggagaaagctcggcaggagtttgaggaacggatggaagaggaaagtcagagt
cagggcagagatttgaccttggaggagaatcaggtgaagaaatatcaccggttgaaagaa
gaagccagcaagagagcagctaccctggcccaggagctggagaagttcaatcgagaccag
aaggctgaccaggaccggctggatctggaagaacggaagaaagtagagacagaggccaag
atcaagcaaaagctgcgggagattgaagagaatcagaaacggattgagaaactagaggaa
tacatcacaaccagcaagcagtctctagaggaacagaagaaactagagggggagctgaca
gaggaggtggagatggccaagcggcgtattgatgagattaataaggagctgaaccaggta
atggagcagctgggggatgcccgcatcgatcgccaggagagcagccgccaacagcgaaag
gcagaaattatggaaagcatcaagcgcctgtaccctggttctgtgtacggccgcctcatt
gacctctgccagcccacacaaaagaagtatcagattgcagtaaccaaggttttgggcaag
aacatggatgctattattgtggactcagagaagacaggccgggactgcattcagtatatc
aaggagcagcgtggggagcctgagaccttcttgcctcttgattacctggaggtaaaacct
acagatgagaaactccgggagctgaagggggcaaagctggtgattgatgtgattcgctat
gagccacctcacatcaaaaaggccctgcagtatgcttgtggcaatgctcttgtttgtgac
aatgtggaggatgcccgccgcattgcctttggaggccaccagcgccacaagacagtggca
ctggatgggaccctgttccagaagtcaggggtgatctctggcggggccagtgacctgaag
gccaaggcccgacgctgggatgagaaagcagtagacaagttgaaagagaaaaaggagcgg
ttgacagaagagctgaaggagcagatgaaggcaaagcgaaaagaggcagaactacgtcag
gtgcagtctcaggcccacggactgcagatgcggctcaagtactcacagagtgacctagaa
cagaccaagacacggcatctggcccttaatctgcaggaaaagtccaagctggagagtgag
ctagccaactttgggcctcgaatcaatgatatcaagaggatcatccagagccgagagagg
gaaatgaaagacttaaaggagaagatgaaccaggtagaggatgaagtatttgaagagttt
tgtcgggagattggtgtgcgcaatatccgggagtttgaggaagagaaggtgaagcggcag
aatgaaattgccaagaagcgtttggagtttgagaatcagaagactcgtttgggtatccag
ttggattttgaaaagaaccaactgaaggaggaccaggataaagtgcacatgtgggagcag
acagtgaaaaaagatgaaaatgagatagaaaagctcaagaaggaggagcaaagacatatg
aagatcatagatgagaccatggcccagctacaagacctgaagaaccagcacctggccaag
aagtcagaggtgaatgacaagaaccacgagatggaggagattcgtaagaaactggggggc
gccaacaaggaaatgacccatttacagaaggaagtgacagccattgagaccaagcttgaa
cagaagcgcagtgaccgccacaacctgctacaggcctgcaagatgcaggacatcaagttg
ccactgtctragggcaccatggatgatatcagtcaggaagagggtagctcccaaggggag
gattcagtgagtggctcccaacggacttccaatatctatgcacgagaggccctcatcgag
attgactacggcgacctgtgtgaggatctgaaggatgcccaggctgaggaggagatcaag
caggagatgaacacgctgcagcagaagctgaatgagcagcagagtgtgctccagcgtatt
gctgcccccaacatgaaggccatggaaaagctggaaagtgtccgagacaagttccaagag
acctcagacgaatttgaggcagcccgaaagcgagccaagaaggccaagcaggcatttgaa
cagatcaagaaggaacgctttgaccgcttcaatgcctgttttgaatcggtggccaccaac
attgatgagatctacaaggccctgtctcgtaacagcagtgctcaggcgttcctgggccct
gagaaccctgaggagccctacttggatggcataaactacaactgtgtggctcctggcaaa
cgcttccgacccatggacaacttgtcagggggggaaaaaacagttgcagctctggccctg
ctctttgccatccacagctacaagccagcccctttcttcgtcctggatgagatcgatgct
gccctggataacaccaacattggcaaggtggcaaattacatcaaggagcagtcaacttgc
aacttccaggccatcgtcatttctctcaaggaggagttctacaccaaggctgagagcctc
attggagtctaccctgagacatttggaatctctttcgctgatggacctgctcctgacgga
cattctcttcgtcattgtgtttttatacttttttttattcctttactattattttag
DBGET
integrated database retrieval system
