Bos indicus (zebu cattle): 109556003 Help Entry 109556003         CDS       T04792                                  Symbol COL11A1 Name (RefSeq) collagen alpha-1(XI) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism biu  Bos indicus (zebu cattle) Pathway biu04820   Cytoskeleton in muscle cells biu04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:biu00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     109556003 (COL11A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     109556003 (COL11A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:biu00536]     109556003 (COL11A1) Glycosaminoglycan binding proteins [BR:biu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    109556003 (COL11A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1 Motif Other DBs NCBI-GeneID:  109556003 NCBI-ProteinID:  XP_019812523 UniProt:  A0A6P5B1N6 LinkDB All DBs Position 3:43202899..43429379 Genome browser AA seq 1805 aa AA seqDB search MERWSSRWKTKRWLWDFTITTLALTFLFQAREVRGADPVDVLKALDFHNSPEGISKTTGF CTNRKNSKGSDTAYRVSKQAQLSAPTKQLFSGGTFPEDFSILFTIKPQKGIQSFLLSIYN EHGIQQIGVEVGRSPVFLYEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV DCKKKTTKPLDRSEKAIVDTNGIMVFGTRILDEEVFEGDIQQLLIIGDPKAAYDYCEHYS PDCDSSAPEAAQAQEPQVDEYAPEDIMEYDYEYGEAEYKEAESVTETPTVTEETIAQTEA NIVDDFQEYNYGTESYQTEAPRSVSGSNEPNPVEEVFTEEYLTGEDYDSQRKNSEDMLYE NKQIDGRDSDLLVDGDLGEYDFYEYKEYEDKPTSPTNEEFGPGVPAETDITETSINGHGA YGEKGQKGEPAVVEPGMLIEGPPGPAGPAGLMGPPGLQGPTGPPGDPGERGPPGRPGLPG ADGLPGPPGTMLVLPFRYGGDSSKGPTVSAQEAQAQAILQQARIALRGPPGPMGLTGRPG PVGGPGSSGAKGEMGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRG FDGLPGLPGDKGHRGERGPQGPPGPPGEDGIRGEDGEIGPRGLPGEAGPRGLLGPRGTPG PIGQPGIAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPG LAGLPGADGPPGHPGKEGQSGEKGSLGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKG EDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPPGQAGEKGKLGVPG LPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPG PKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTG PPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGVSGKDG PAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQG PPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKG DKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQG LPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGGVGEKGEPGEAG NPGPPGEAGTGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPG EPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKG EAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPPGLPG LKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPIGPPG PPGLPGPQGPKGTKGSTGPAGQKGDSGLPGPPGPPGPPGEVIQPLPILSPKKTRRHAEST QADAGDNILDYNDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGE YWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKLL SYLDIEGNSINMVQMTFLKLLTASARQNFTYYCHQSVAWYDVSSGSYDKALRFLGSNDEE MSYDNNPYIKALFDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGP VCFLG NT seq 5418 nt NT seq  +upstreamnt  +downstreamnt atggagcggtggtcctctaggtggaaaacgaaacggtggctctgggatttcaccataaca actctcgcactgactttcctcttccaggctagagaggtcagaggagctgatccagttgat gtactaaaagctctagattttcacaattctccagagggaatatcaaaaacaacgggcttt tgcacaaacagaaagaattcaaaaggttcagatactgcttacagagtttcaaagcaagca caacttagcgccccaacgaaacaattattttcagggggaacttttccagaagatttttca atattatttacaataaaaccccaaaaaggaattcagtctttccttttatctatatataat gagcacggtattcagcaaattggtgttgaggttgggagatcacctgttttcctgtatgaa gaccacactggaaaacctgccccagaagactatcccctttttagaaccgttaacattgca gatggaaagtggcaccgggtagcaatcagcgtggagaagaaaactgtgacaatgattgtt gattgtaagaagaaaactacaaaaccgcttgacagaagtgagaaagcaatcgttgacacc aatggaattatggtttttgggacaaggattttggatgaagaagtttttgagggggacatc cagcaattgttgatcataggtgaccccaaagcagcatatgactactgtgagcattacagt ccagactgtgattcctcagctcccgaggctgctcaggctcaggaaccccaggtcgacgag tatgcacctgaggatataatggaatatgactatgagtatggggaagcagaatataaagag gctgagagtgtaacagagacacccactgtaactgaggagacaatagcgcaaactgaggca aatattgttgatgattttcaagaatacaactatgggacagaaagttaccagacggaagct cctaggagtgtatctggatcaaatgagccaaatccagttgaagaagtatttactgaagaa tatctaactggagaggattatgattcccagaggaaaaattctgaggatatgctatatgaa aacaaacaaatagacggcagggactctgatcttctggtagatggagatttaggcgaatat gatttttatgaatataaggaatatgaagataaaccaacaagtcccactaatgaagaattt ggtccaggtgttccagcagaaacagatatcacagaaacaagtataaatggccatggtgca tatggagaaaaaggacagaaaggagaaccagcagtagttgaacctggcatgcttattgaa ggaccaccagggcctgcaggacctgcgggtcttatgggtcctccaggtctacaaggcccc actggaccccctggtgaccctggcgagaggggtcctccaggacgtcctggtttaccaggg gctgatggtctacctggtcctcctggtaccatgttagtgttaccgtttcgttatggcggt gatagttccaaaggaccaaccgtctctgctcaggaagctcaggcccaggccattcttcag caggctcggattgctctgagaggtccacctggcccaatgggtctgactggaagaccgggt cctgtgggtgggcctggttcttctggggccaaaggtgagatgggtgatccaggtcctcag ggcccacgtggtgttcaaggtcctcctggtccaacaggaaaacctggaaaaaggggtcgt ccgggtgctgatggaggaagaggaatgccaggagaacccggggccaagggggatcgagga tttgatggacttccaggtctaccaggtgacaagggtcacaggggtgaacgaggtcctcaa ggtcctcctggtcctcctggtgaagatggaataaggggagaagatggagaaataggacca aggggtcttccaggtgaagctggtccacgaggtttgctaggaccaagaggaactccagga cctattggacagcctggtatagccggtgtggatggcccccccggaccaaaagggaacatg ggtcctcaaggggagccgggacctcctggtcagcagggaaacccaggacctcaaggtctt cctggtccacaaggtccaattggtcctccgggtgaaaaaggtccacaaggaaaaccaggg cttgcaggacttcctggtgctgatgggcctcctggtcatcctggaaaagaaggccagtct ggagaaaaaggttccctgggccctcctggtccacaaggtcccattggctaccctggtccc cgaggagtaaagggagcagatggtgtcagaggtctcaagggctctaaaggtgaaaagggt gaagatggttttccaggattcaaaggtgacatgggtctcaaaggtgatagaggagaagtt ggtcaagtaggtccaagaggagaggatggccctgaaggccccaaaggtcgagctggtcca actggagaccccggtcctcctggtcaagcaggagagaaggggaaacttggcgttccagga ttaccaggatatccaggaagacaaggtccaaagggttccactggatttcctgggtttcca ggtgccaatggagagaaaggtgcccggggcgtagctggcaaaccaggtcctcggggtcag cgtggtccaacgggacctcgaggttcaagaggagcaagaggtcccactgggaaaccaggt ccaaagggcacttcaggtggtgatggccctcctggccctcctggtgaaagaggtcctcaa ggacctcaaggtccagttggattccctggaccaaaaggccctcctggaccacctggaaaa gatggcctgccaggacatcctgggcaacgtggagagactggatttcaaggcaagaccggc cctcctgggccagggggtgttgttggaccacagggaccaactggtgagactggtccaata ggtgaacgtggacatcctggccctcctggccctcctggggagcaaggtcttcctggtgct gcaggaaaagaaggtgcaaagggtgacccaggtcctcaaggtgtctcagggaaagatgga ccagcaggactacgtggtttcccaggtgaaagagggcttcctggagctcagggtgcccct ggattgaaaggaggagaaggtccccagggcccaccaggtccagttggctcaccaggagaa cgtggatcagcaggaacagctggcccaattggtttgccagggcggccaggaccccagggt ccccctggtccagctggagagaaaggtgctccaggagaaaaaggtccccaaggtcctgca gggagagatggagtacaaggccctgtgggtctccccgggcctgcggggcctgctggctcc cctggagaagatggagacaagggtgaaattggtgaaccaggacaaaaaggcagcaagggt gacaaaggagaaaacggtcctcctggtcccccaggtcttcaaggtccagttggtgcccct ggaattgctggaggtgatggtgaaccaggtcccagaggtcagcaggggatgtttggacaa aaaggtgatgagggtgccagaggtttcccaggacctcctggtcccataggtcttcagggt cttccaggcccacctggtgaaaaaggagagaatggggatgttggtcccatgggtccacct ggtcctccaggcccaagaggtcctcaaggtcccaatggagctgatggaccacaaggacct ccaggatccattggctcagttggtggtgttggagaaaagggtgaacctggagaagcaggg aacccagggcctcctggggaagcaggcacaggtggtcccaaaggagaaagaggagagaaa ggagaagctggtcccccgggtgctgctggacctcctggtgctaagggaccgccaggtgat gatggccctaagggtaatccgggtcctgttggttttcctggagatcctggtcctcctggt gagcctggccctgcaggtcaagatggtgttggtggtgacaagggtgaagatggagatcct ggacaaccgggtcctcctggcccatctggtgaggctggcccaccaggtcctcctggtaaa agaggtcctcctggagctgcaggggcagagggaagacaaggtgaaaaaggcgctaaggga gaagcaggagctgagggtcctccaggaaaaactggcccggttggtcctcaaggaccggcc ggaaagcctggtccagagggtcttcggggcatccctggccctgtgggagaacaaggtctc cctggagctgcaggccaagatgggccacctggtcctttgggacctcctggcttacccggt ctcaaaggtgaccctggctccaagggtgaaaagggacatcctggtttaattggcctaatt ggtcctccaggagaacaaggtgaaaagggtgacagaggactccctggaactcaaggatct ccaggagcaaagggagatggaggaattccaggtcctgccggtcccattggtccacctggt cctccgggcttaccaggtcctcaaggtccaaagggcactaaaggctctacgggacctgct ggccagaagggtgacagtggtcttccagggcctcctgggcctccaggtccaccaggtgaa gtcatacagcctttaccaatcttgtcacccaaaaaaacaagaagacatgctgaaagcacg caagcagatgcaggtgataatattctggattacaatgatggaatggaggaaatatttggt tccctcaattccttgaaacaagacatcgagcatatgaagtttccaatggggacacagacc aatccagcccgaacttgcaaagatctgcaactcagccaccctgacttcccagatggtgaa tattggattgatcccaaccaaggttgctcaggagattccttcaaagtttactgtaatttc acatctggtggtgagacttgcatttatccagacaaaaaatcggagggagtaagaatttca tcatggccaaaggagaaaccaggaagctggtttagtgaatttaagagaggaaaactgctt tcatatttagatatcgaaggcaattccattaatatggtgcaaatgacatttctgaaactg ctgactgcctctgctcggcaaaatttcacctattactgtcatcagtcagtggcctggtat gatgtgtcatcaggaagctatgacaaagcacttcggttcttgggatcaaatgatgaggag atgtcctatgacaacaacccttacatcaaagccctatttgatggctgtgcgtccagaaaa ggctatgaaaagactgtgattgaaatcaatacaccgaaaattgatcaagtacctatcgtt gatgtaatgatcaatgactttggtgatcagaatcagaagtttggatttgaagttggtcct gtttgttttcttggctaa

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