Bos indicus (zebu cattle): 109556011
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Entry
109556011 CDS
T04792
Name
(RefSeq) vascular cell adhesion protein 1-like
KO
K06527
vascular cell adhesion molecule 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04064
NF-kappa B signaling pathway
biu04514
Cell adhesion molecules
biu04668
TNF signaling pathway
biu04670
Leukocyte transendothelial migration
biu04933
AGE-RAGE signaling pathway in diabetic complications
biu05143
African trypanosomiasis
biu05144
Malaria
biu05417
Lipid and atherosclerosis
biu05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
109556011
04668 TNF signaling pathway
109556011
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109556011
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
109556011
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
109556011
05143 African trypanosomiasis
109556011
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
109556011
05418 Fluid shear stress and atherosclerosis
109556011
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
109556011
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
biu04515
]
109556011
04090 CD molecules [BR:
biu04090
]
109556011
04091 Lectins [BR:
biu04091
]
109556011
Cell adhesion molecules [BR:
biu04515
]
Immunoglobulin superfamily
VCAM
109556011
CD molecules [BR:
biu04090
]
Proteins
109556011
Lectins [BR:
biu04091
]
I-type lectins (Siglecs)
109556011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
C2-set
ig
Ig_2
V-set
Ig_4
C2-set_2
Ig_6
Ig_5
ICAM1_3_5_D2
ICAM_N
C1-set
Receptor_2B4
Adhes-Ig_like
TrkA_C
Motif
Other DBs
NCBI-GeneID:
109556011
NCBI-ProteinID:
XP_019812534
UniProt:
A0A6P5BNP5
LinkDB
All DBs
Position
3:complement(45545070..45567589)
Genome browser
AA seq
740 aa
AA seq
DB search
MPKKMFVIFGVSNILWMVFAVSQAIKVDMFPDESKIFAQIGDSVSLTCSATGCESPSLSW
RTQMDSPLNGKVRNEGTTSTLIMDPVSFEDEHQYLCTVICGAAKLEKAIQVEIYSFSKDP
EIHLSSPAEVGKPVTVTCSVPDVYPFERLEIELLKGNHPMKVQDFLEPSEKKAQETKSLD
VTFSPTDEDIGTALVCQATLHIYDDDSPPKVRKTTKELEVYISPKDTAISVNPSTRLQEG
DSVTMTCTSAGLPAPRILWSKKLDNGNRQLLSENATLTLISMRAEDSGIYVCEGNNPVGK
DRKEVKLTVQEKMFTVEISPGPQIAAQVGDSVVLTCDVRDCESPSFSWRTQIDSPLNGKV
RREGSKSTLTLSPVSFENEHFYLCTVICGQKKLEKGIQVELYSFPSDPEIEMSGPLVNGN
PVTVSCKVPNVYPSDRLEIELFKGESIMMNKIFLEDVSKKALETKSLEMTFIPTVEDTGN
VLVCLAQLPIDEMEFEPKQRQSTQILYVNVAPRDTTILVSPSSTLEEGSSVNMTCSSNGL
PAPKILWSRQLSNGDLQPISENATLSFMSTKMEDSGIYVCEGINQAGISRKEVNLIIQVA
PKDIQLTAFPSERVKEGDTVIISCICGNVPPTLIILKKKAETGYIVLKSTGGAYTIHRAQ
LEDAGVYQCESKNEVGSQLRSLTLDVKGRESNKDYFSPEFLVLYCASALILTAIGMIIYF
ARKANMTGSYSLVEAQRTKV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaagatgtttgtgatctttggagtctcaaatatactttggatggtgtttgca
gtttctcaagctatcaaagttgacatgttcccagatgaatccaagatttttgctcagatt
ggtgactctgtttcactgacttgtagcgcaacaggctgtgagtctccatcattgtcttgg
agaactcagatggacagtccactgaatgggaaggtgagaaatgaagggaccacatccacg
ctgatcatggatcctgttagtttcgaggatgaacaccagtacctgtgcacagtgatttgc
ggggctgcgaaactggagaaagcaatccaagtggagatctactctttctctaaggatcca
gagattcatttgagtagccccgcagaggtcgggaagccagtcacagtcacgtgttcagtg
cctgatgtttacccatttgaaaggctggagatagagttgttgaaaggcaaccatcccatg
aaagtacaggactttctggagccttcagaaaaaaaggcccaggaaacaaagagcctggac
gtgaccttctcgcctactgatgaggatattgggacagctcttgtttgtcaagctacatta
cacatttatgatgatgattctccacccaaagtaaggaaaactacaaaagaactggaagtc
tacatctcccccaaagacacggctatatccgtgaatccctccacaaggctgcaggaaggc
gactccgtgacgatgacgtgtaccagtgcaggtytaccagctccacggattctctggagc
aagaaattagacaatgggaaccgacagctcctttctgagaatgcaactctcactttaatt
tctatgagggcagaagattctgggatttatgtgtgtgaaggaaataaccctgttgggaaa
gacagaaaagaggtgaaattaactgttcaagagaaaatgtttactgttgagatctctcct
ggaccccagattgctgctcaggttggcgactcagtcgtgttgacctgtgatgtcagggac
tgcgagtccccatctttctcttggagaacccagatagacagccctctgaatgggaaggtg
aggagggagggctccaagtccacgttgacactgagccctgtgagttttgagaacgaacat
ttttacctgtgcactgtgatatgtgggcaaaagaaactggaaaagggaatccaggtggag
ctctactccttccctagcgatccagaaattgaaatgagtggtccattagtgaatggaaac
ccagtcactgtaagctgcaaggttcctaatgtgtatccttctgaccggctggagattgaa
ttgtttaaaggggagagtattatgatgaataaaatctttttggaagatgtaagtaagaaa
gccctagagaccaagagtttagagatgaccttcatccccaccgttgaagatactggaaat
gttcttgtttgtctggctcagttacctattgatgaaatggaatttgaacccaaacaaagg
cagagtacacagatactttatgttaatgttgctcccagggatacaaccatcttggtcagt
ccctcctccaccctggaggaaggtagttctgtgaatatgacatgctctagcaatggcctt
ccagctcccaaaatcttgtggagcaggcagctaagtaatggggatctacagcctatttct
gagaatgcaactctcagcttcatgtctacaaaaatggaagattctggcatttatgtctgt
gaaggcattaaccaggctggaataagcagaaaagaagtcaacttaattatccaagttgct
ccaaaagatatacaacttacagcttttccctctgagagggtcaaagaaggagacactgtc
attatctcctgtatatgtgggaatgttcccccaactttgataattctgaagaaaaaagca
gagactggctacatagtgctaaagtctacaggtggtgcatataccatccacagggctcag
ttagaggatgcgggagtataccaatgtgaatctaaaaatgaagttggctcacagctaaga
agcctaacacttgatgttaaaggaagagaaagtaacaaggactatttttctcctgaattt
ctcgtgctctattgtgcatccgccttaatattaactgccattggaatgattatttacttt
gctagaaaagccaacatgacagggtcatacagccttgtagaagcacagagaacaaaagtg
tag
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