Bos indicus (zebu cattle): 109556012
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Entry
109556012 CDS
T04792
Name
(RefSeq) vascular cell adhesion protein 1-like isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04064
NF-kappa B signaling pathway
biu04514
Cell adhesion molecules
biu04668
TNF signaling pathway
biu04670
Leukocyte transendothelial migration
biu04933
AGE-RAGE signaling pathway in diabetic complications
biu05143
African trypanosomiasis
biu05144
Malaria
biu05417
Lipid and atherosclerosis
biu05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
109556012
04668 TNF signaling pathway
109556012
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109556012
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
109556012
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
109556012
05143 African trypanosomiasis
109556012
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
109556012
05418 Fluid shear stress and atherosclerosis
109556012
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
109556012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
biu04515
]
109556012
04090 CD molecules [BR:
biu04090
]
109556012
04091 Lectins [BR:
biu04091
]
109556012
Cell adhesion molecules [BR:
biu04515
]
Immunoglobulin superfamily
VCAM
109556012
CD molecules [BR:
biu04090
]
Proteins
109556012
Lectins [BR:
biu04091
]
I-type lectins (Siglecs)
109556012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
C2-set
ig
Ig_2
V-set
C2-set_2
Ig_6
Ig_4
ICAM_N
ICAM1_3_5_D2
Ig_5
C1-set
Adhes-Ig_like
TrkA_C
Motif
Other DBs
NCBI-GeneID:
109556012
NCBI-ProteinID:
XP_019812535
UniProt:
A0A6P5BNM5
LinkDB
All DBs
Position
3:complement(45504695..45527506)
Genome browser
AA seq
739 aa
AA seq
DB search
MLRKMFVIFGASDVLWMVFAVSQASQIDIFPSESKIFAQIGDSVSLTCSTTGCESPSLSW
RTQIDSPLNGKVKTEGTTSMLIMDPVSFKDEHQYLCTAICKDKKLEKAIRVEIYSFSKDP
EIHLSSPPEVGKPVTVTCSVPDVYPFERLEIELLKGNRPMKVQDFLEPSEKKAQETKSLD
VTFSPTDEDIGTALVCQATLHIYDDDSPPKVRKTTKELEVYISPKDTAISVNPSTRLQEG
DSVTMTCASAGLPAPRILWSKKLDNGNXQLLSENATLTLISMRAEDSGIYVCEGNNPVGK
DRKEVKLIVQEKNFTVEISPGPQIAAQVGDSVVLTCDVRDCESPSFSWRTLIDSPLNGNV
RNEGSKSTLTLSPVSFENEHFYLCTVMCGQKKLEKRIQVKPYSFPSDPEIEMSGPLVSGN
PVTVSCRVPNVYPSDRLEIELFKGESIMMNKTFSKDLSKKALETKSLEKTFIPTTEDTGN
VLVCLARLPIDEMEFELKQRQSTQTLYVNVAPRDTTILVSPSSILEEGSSVNMTCSSNGL
PAPQILWSRQLSNGDLQPISENATLSFMSTKMEDSGIYVCEGINQVGTSRKEVNLIIQVA
PKDIQLTAFPSEXVKEGDTVIISCTCGNVPPTLIILKKKAETGYTVLKSTGGAYTIHRAQ
LEDAGVYQCESKNEVGSQLRSLTLDVKGRESNKDYFSPELLVLYCASSLIIPAIGMIIYF
ARRANMTGSYSLVEAQKVC
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcttaggaagatgtttgtgatctttggagcctcagatgtactttggatggtgtttgca
gtttctcaagcttcccaaatcgacatattcccaagtgaatccaaaatttttgcgcagatt
ggtgactctgtttcactgacttgcagcacaacaggctgtgagtccccatcattgtcttgg
agaactcagattgacagtccactgaatggaaaggtgaaaactgaggggaccacatccatg
ctgatcatggatcctgttagtttcaaggatgaacaccagtacctgtgcacagcgatttgc
aaggataagaaactggagaaagcaatccgagtggagatctactctttctctaaggatcca
gagattcatttgagtagccccccagaggtcgggaagccagtcacagtcacatgttcggtg
cctgatgtttacccatttgaaaggctggagatagagttgttgaaaggcaaccgtcccatg
aaagtacaggactttctggagccttcagaaaaaaaggcccaggaaacaaagagcctggac
gtgaccttctcgcctactgatgaggatattgggacagctcttgtttgtcaagctacatta
cacatttatgatgatgattctccacccaaagtaaggaaaactacaaaagaactggaagtc
tacatctcccccaaagacacagctatatccgtgaatccctccacaaggctgcaggaaggc
gactccgtgacgatgacgtgtgccagtgcaggtctaccagctccacggattctctggagc
aagaaattagacaatgggaacckacagctcctttctgagaatgcaactctcactttaatt
tctatgagggcagaagattctgggatttatgtgtgtgaaggaaataaccctgttgggaaa
gacagaaaagaggtgaaattaattgttcaagagaaaaactttactgttgagatctctcct
ggaccccagattgctgctcaggttggcgactcagtcgtgttgacctgtgatgtcagggac
tgcgagtccccatctttctcttggagaacmctgatagacagccctctgaatgggaatgtg
aggaatgagggctccaagtccacgttgaccctgagccctgtgagttttgagaacgaacat
ttctacctgtgcactgtgatgtgtgggcaaaagaaactggaaaagagaatccaggtgaag
ccctactccttccctagcgatccagaaattgaaatgagtggcccattagtgagtggaaac
ccagtcactgtaagctgcagggttcctaatgtgtatccttctgaccggctggagattgaa
ttgtttaaaggggagagtattatgatgaataaaaccttctcgaaagatttaagtaagaaa
gccctagagaccaagagtttggagaagaccttcatccccaccactgaagatactggaaat
gttcttgtttgtctggctcggttaccaattgatgaaatggaatttgaactcaaacaaagg
cagagtacacaaacactttatgttaatgttgctcccagggatacaaccatcttggtcagt
ccctcctccatcctggaggaaggtagttctgtgaatatgacatgctctagcaatggcctt
ccagctccccaaatcttgtggagcaggcagctaagtaatggggatctacagcctatttct
gagaatgcaactctcagcttcatgtctacaaaaatggaagattctggcatttatgtctgt
gaaggcattaaccaggttggaacaagcagaaaagaagtcaacttaattatccaagttgct
ccaaaagatatacaacttacagcttttccttctgagagkgtcaaggaaggagacactgtc
attatctcctgtacgtgtggaaatgttcccccaactttgataattctgaagaaaaaagca
gagactggctacacagtgctaaagtctacaggtggtgcatataccatccacagggctcag
ttagaggatgcgggagtataccagtgtgaatctaaaaatgaagttggctcacagctaaga
agcctaacacttgatgttaaaggaagagaaagtaacaaggactatttttctcctgaactt
ctggtgctctattgtgcatcctccttaataatacctgccattggaatgattatttacttt
gctagaagagccaacatgacagggtcatacagtcttgtagaagcacagaaagtctgctaa
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