Bos indicus (zebu cattle): 109556058
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Entry
109556058 CDS
T04792
Symbol
RPAP2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
biu01009
]
109556058 (RPAP2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biu03021
]
109556058 (RPAP2)
Enzymes [BR:
biu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
109556058 (RPAP2)
Protein phosphatases and associated proteins [BR:
biu01009
]
HAD phosphatases
Fcp/Scp phosphatases
109556058 (RPAP2)
Transcription machinery [BR:
biu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
109556058 (RPAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
LiaI-LiaF-TM_PspC
Motif
Other DBs
NCBI-GeneID:
109556058
NCBI-ProteinID:
XP_019812611
UniProt:
A0A6P5B1Y3
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All DBs
Position
3:complement(54368619..54557904)
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AA seq
608 aa
AA seq
DB search
MADWVGPCSAGRKARRSRASRDVAGTKQTSALNQEDASQRKAELEAAVRKKIEFERKALH
IVEQLLEENISEEFLRECGKFITPAHYSDVVDERSIIKLCGYPLCQNKLGIVPKQKYKIS
TKTNKVYDITERKCFCSNFCYKASKFFEAQIPKSPVWIREEERHPDFQLLQDGQSGPSGE
EIQLCSKAIKTSDIDSPGHFEKHYESSSSSSHSDSSSDNEQDFVSSILPGNRPNATRPQL
HEKSIMKKKAGQKVNSQHESKEQTVVDVIEQLGNCRLDNQEKATACELHLQNVNTQISSN
SSLQKKLEASEISDIKYSSSKVTLVGISKKSAEHFKRKFAKSNQVSGSASSSLQVCPEIA
KANLLKALKETLIEWKTEETLRFLYGQNYASVCLKSSSTPLVKEEELDEDDMNSDPDSHS
PALQELNSLDESLPFRASDTAIKPLPSYENLKKETETLNLRIREFYRGRYVLNEETTKSQ
DSEEHDPTFPLIDSSSQNQIRKRIVLEKLNKVLPGLLGPLQITLGDIYTQLKNLVHTFRL
TNRNIIHKPAEWTLIALVLLSILTSTLGIQKLSQENVMFTQFMTTLLEELHLKNEDLESL
TIIFRTSC
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggctgactgggtcggaccgtgctctgcgggccgcaaagcccggcgttcccgcgcctcc
cgagatgtcgcaggtactaagcagacaagtgccttgaaccaagaagatgcttctcaaagg
aaagcagaactagaagcagctgtgagaaagaagattgagtttgagagaaaagctttacat
attgtggaacagcttttagaagagaatatttcagaagaattcctaagggagtgtgggaar
ttcatcacacctgctcactatagtgatgttgtggatgagcgttctattatcaaactctgt
ggctatcctttatgtcagaacaagctaggaattgtaccaaaacagaaatataaaatttct
accaaaactaataaagtctatgatattactgaaagaaagtgtttttgcagcaatttttgt
tataaagcatctaagttttttgaagcacaaattcctaaaagtccagtgtggattcgcgag
gaagaaagacatcctgattttcagctgctacaggatggacaaagtggtccttctggagaa
gaaatacagttatgcagcaaagccattaaaacatcagatattgacagtcctggccatttt
gagaagcattatgaatctagttcttctagcagtcatagtgatagtagcagtgataatgag
caagactttgtttcctccattctaccaggaaacagaccaaatgcaacaaggccacagctg
cacgaaaaaagcataatgaaaaagaaagctggtcaaaaagttaactctcagcatgaaagc
aaagagcaaacagtagtagatgtcattgagcagttaggcaattgcagattagataatcag
gagaaagctactgcttgtgaacttcatttacagaatgtaaatacacagatttcttcaaat
agttctctgcaaaaaaaattagaagcttcagaaatttctgatattaaatacagtagttca
aaagtaactcttgtaggcataagtaagaaaagtgctgaacattttaagaggaaatttgcc
aaatcaaaccaagtttctgggtcagcttccagttcattgcaggtgtgccctgaaattgca
aaggcaaacttacttaaagccctgaaagagactttgattgagtggaagacagaagaaact
ttgaggtttttgtatggccagaattatgcatctgtatgtctaaaatcctcctcaacccct
ctggttaaagaagaagaacttgatgaagatgatatgaactctgatccagatagtcattcc
cctgccctgcaggagttgaacagcttggatgagtctttaccatttagagcctcagataca
gccattaaaccactgccaagttatgagaacttgaaaaaagaaactgaaacattaaattta
aggatcagggagttttatagaggacgatatgttttgaatgaagaaaccaccaaatcacaa
gactcagaagagcatgatcccacctttccactgatagattcaagttctcagaaccagatc
agaaaacgcatcgtacttgaaaaattgaataaagtattgcctggacttttgggacctctt
cagattacattaggagatatttacacacaacttaaaaatcttgtccatactttcagatta
acaaatagaaatattatacataaacctgcagagtggaccttaattgctttggtgttgctg
tcaatattgacctcaactcttggcattcagaagctttctcaggaaaatgtgatgtttaca
cagttcatgaccaccctgcttgaagaattgcatttaaaaaatgaagaccttgaaagttta
accatcatatttagaaccagctgttaa
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