Bos indicus (zebu cattle): 109556067
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Entry
109556067 CDS
T04792
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109556067 (HFM1)
Enzymes [BR:
biu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109556067 (HFM1)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
109556067 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Hfq
Motif
Other DBs
NCBI-GeneID:
109556067
NCBI-ProteinID:
XP_019812634
UniProt:
A0A6P5BNT8
LinkDB
All DBs
Position
3:55415434..55524243
Genome browser
AA seq
1437 aa
AA seq
DB search
MLESNDSVFSLDNLFFEKTDEXENHLDSEISMDWFLPPAPLISEIPDTQALEEEIENHQL
LGQNKKSKMLPSNLKITNEDINYVLQTQKFQFDFPSNEYEEDDLNLGGAGNNDLHVAGKL
TCGSSQKXKNHIGTEIELEKNVPDDTKLVNSAQDKGVSTSAFRKRLFKISDNIHEDGYSN
DSANLDSNTGSVKIVQTEVNKGKSWKDSNSKQKPQYSDCNILTATDTLFASEIREGIIKA
PLFPVASQPHTVQGVTEKSLDSLKAVTEIPAKFRSIFKEFPYFNYIQSKAFDDLLYTDRN
FVICAPTGSGKTVVFELAITRLLMEVPLPWSNIKIVYMAPIKALCSQRFDDWKKKFGPIG
LNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVHLVRLFLIDEVHVVKD
ENRGPTLEVVVSRMKTVQILSPAVENTNSIIPMRFVAVSATIPNAEDIAEWLSDGERSAV
CLKMDERHRPVKLRKVVLGFPSSDNQTEFKFDLTLNYKIASIIQTYSDQKPTLVFCATRK
GVQQAASVLVKDAKFIMTVEQKQRLQKCAYSIKDSKLRDILIHGVAYHHAGMELSDRKVV
EGAFTVGDIPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGRP
QFDTTATAVIMTRLSTKEKYIQMLACSDTIESSLHRHLIEHLNAEIVLHTITNVNIALEW
IRSTLLYIRALKNPSHYGFASGLNKDGIESKLQELCLKNLNDLSSLNLIKMDEDINFKPT
EAGRLMAWYYITFETVKKFCTMSGKETLSDLVTMIASCKEFLDVQLRINEKKALNTLNKD
PNRTTIRFPMEGRIKTREMKVNCLIQAQLGCIPVQDFALTQDTAKIFRNGSRITRWLSDF
VATQEKFAVLLNSLILAKCFRCKLWENSPHVSKQLEKIGITLSNAMVNAGLTSFKKIEET
DARELELILNRHPPFGTQIKETVMYLPKYELEVEQITRYSDTMAEILVTVILRNFEQLQT
KRTASNSHYVTLIIGDADNQLVFKHKIMDSVLLKAGNWAKKFDVRRALKSENLSINLISS
EYVGLDIQRKFTVFYSGPKRFGNQIIIQKKSETEISHSEHSDRSTVAGPKKGMTACKKPG
NRECNHHCKNKHTCGHDCCKTGVAQKSEGKESTISSYLSDLRNRNAVSSLPPVKRLKMQM
NKSPSVDLKDFGFAPKPSLPSIARSEYLNTPELPIMEQRDQHEIYTKSQQQPSAYQDKEV
LKVNFELGNEIWDDFDDENLVEITSFSAETEKTKTSGFGNTLSSSTGESKLPFQESKGQF
QRESSKSFVSSHEKPDIYLSNSAVSKFGASSMTQLPQQSGNASIVHLQERKQQSLSPEIE
KLCFTRSEKISNSSNFNEKVDCFIRNECKKEIDFSRYHPDDEADEIKSFLGIFDGIF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgttggaatcaaatgactccgtgttttccttggataatttgttttttgaaaaaacagat
gaagytgaaaaccacctagacagtgaaatatctatggattggtttcttccacctgctcca
ctgatttcagaaattccagatactcaagcattagaggaagaaatagaaaatcatcaactg
ttaggtcagaataaaaaatcaaaaatgttaccatcaaatttaaagataactaatgaagac
ataaattatgttttacaaactcaaaaattccagtttgacttcccttctaatgaatatgaa
gaagatgatctaaatttaggaggggcaggtaacaatgacttacatgttgctggcaagctg
acatgtggttcttctcagaaatgsaaaaatcacattggcactgagatagaacttgagaaa
aatgttccagatgatacaaagttagttaattctgcacaagataaaggagtgagcacrtca
gccttccgcaaaaggttatttaaaatatctgataatatacatgaagatggttattccaat
gacagtgcaaacttggactctaatactggctcagtgaaaattgtccaaacagaagtgaac
aaagggaaatcatggaaagatagcaatagtaagcagaaacctcaatattcagactgtaac
attttgacagccactgatacactttttgcttctgaaatcagagaaggcataatcaaagca
ccactttttccagttgcatcccagcctcatacagttcaaggggtaacagaaaaaagttta
gattccttgaaggctgtcacagaaattcctgctaaatttagaagtattttcaaagaattc
ccatatttcaattatatacagtccaaagcctttgatgatcttctttatacagataggaat
tttgtgatttgtgctccaactggttctgggaaaactgtagtgtttgaactagctataaca
agactgttaatggaagtaccattgccatggtcaaacattaaaattgtttacatggcacca
ataaaagccctgtgtagtcagcgttttgatgattggaaaaaaaaatttggaccaatagga
ttaaattgtaaagaactcactggagatacagtaatggatgacctatttgagattcagcat
gcccatattattatgacaactccagaaaaatgggatagcatgactagaaaatggagagac
aactctttggtccatctggttcgattgtttctcattgatgaggtacatgttgtaaaagat
gaaaatcgtggaccaactcttgaagttgtagtcagcagaatgaaaactgtgcagatttta
tctcctgctgtagaaaataccaacagtattattccaatgagatttgtggctgtatctgca
acgattccaaatgctgaggacattgcagaatggctttcagatggtgaaagatctgctgta
tgtctgaaaatggatgagagacatagaccagtgaaacttcggaaagtggttcttgggttt
cccagcagtgataaccaaactgaattcaagtttgatttaaccctcaactacaaaattgcc
agtattatacaaacgtactctgatcagaaacccacacttgtgttttgtgcaacaaggaaa
ggtgtgcaacaggctgcttcggttcttgtgaaagatgcaaaatttattatgactgtggaa
cagaaacagaggttacaaaagtgtgcatattccataaaagattcaaaactgagagatatc
ttaatacatggtgtygcttatcatcatgctggtatggaactgtcagatagaaaagtagtt
gaaggagcttttactgttggagatataccagttctttttactaccagtaccttagccatg
ggagtcaatttgcctgctcacctagtggttataaaatctacaatgcattatgctggagga
atgtttgaagaatacagtgaaacagatattctacagatgattggtagagctggtcgacct
caatttgacactacagccactgcagttattatgactcggttaagcacaaaagagaagtat
attcagatgcttgcttgcagtgacactatagaaagcagtttgcacagacatcttattgag
catttaaatgcagagatagtattgcataccatcacaaacgtgaatattgctttggaatgg
atacgatcaaccttgctttatatcagagccttgaaaaatccatctcattatggttttgca
tctggattgaacaaagatggaattgaatcaaaattacaagaattgtgtttgaagaatctg
aatgatttgtcatctctgaacctgataaaaatggatgaagatattaatttcaaaccaact
gaggcaggaagattgatggcttggtattatattacatttgagacagtgaagaaattttgt
acaatgagtggaaaagaaactttatcagatctggtcacaatgatagccagctgcaaggaa
tttctagatgtacaattaagaataaatgaaaagaaagcattgaatactttgaacaaagat
ccaaatcggacaactatcagatttccaatggaaggaaggattaaaacaagagaaatgaaa
gtaaattgtcttattcaggctcagctaggatgcattcccgtacaagactttgctttgacg
caagataccgcaaagattttcagaaatggctcacgaattacaagatggttatcagatttt
gtggctactcaagaaaagtttgcggtattattgaacagtttgattttagctaaatgtttt
agatgtaaactttgggaaaactctccacatgtatccaaacagctggaaaaaattggtata
acattatcaaatgctatggtaaatgcaggtttgacttcctttaaaaaaatagaagaaaca
gatgcaagggaacttgagctgattttaaatagacatcccccttttggaactcagataaaa
gaaacagtgatgtatctaccaaaatatgaacttgaagtggaacagattacaagatatagt
gataccatggcagaaatattagtgactgttatattaagaaactttgaacagctacaaact
aaaagaacagcatcaaattctcactatgtcaccttgatcataggtgatgcagataatcaa
ctggtttttaagcacaaaattatggattctgttttgctaaaagctggaaattgggctaaa
aagtttgatgtgaggagagctcttaaatctgaaaatcttagcataaatctaattagttca
gaatatgttggacttgatatacagcgcaaatttacagtcttttactcaggaccgaagaga
tttggaaatcaaataattatacaaaaaaaatcagaaacagagatttcccattctgaacat
tcagatagatctactgtagcaggccccaaaaaaggaatgactgcttgcaaaaaacctggg
aaccgagaatgtaatcatcactgtaaaaataaacatacatgtggacatgactgctgtaaa
actggagttgcacagaagtcagaagggaaagaatcaacaatttcttcatatttatctgat
ttaagaaatagaaatgctgtttcatctcttcctccagttaaacgtctgaagatgcagatg
aataaatctccaagtgtggaccttaaggactttggttttgctccaaaaccttctcttccc
agtatagcaaggtcagaatatttaaacacacctgaattgcctataatggagcagagggat
cagcatgagatctatacaaaaagtcaacaacaaccatctgcatatcaagacaaagaagtt
ttgaaagtgaactttgaattgggaaatgaaatttgggatgactttgatgatgaaaactta
gtagaaattactagcttttcagctgaaactgagaagacaaaaacatcaggatttggaaac
actttgagttcaagtactggggaaagtaagctaccattccaagaatcaaaaggccagttc
caaagagaatcatctaagagttttgtttcatcacatgagaagccagatatttatttatca
aattctgctgtgtccaagtttggtgcatcctccatgacacaattacctcaacaatctgga
aatgcaagtattgtccatttacaagaaagaaaacaacaaagtctgtcaccagagattgaa
aagctatgctttactcgctctgaaaaaatatcaaactcttcaaattttaatgagaaagtg
gattgctttattagaaatgaatgtaaaaaggagattgatttcagtaggtatcatcctgat
gatgaagctgacgaaataaagtcttttctgggaatatttgatggtatcttctaa
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integrated database retrieval system
