Bos indicus (zebu cattle): 109556373
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Entry
109556373 CDS
T04792
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2 isoform X1
KO
K11101
patched 2
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04340
Hedgehog signaling pathway
biu05200
Pathways in cancer
biu05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109556373 (PTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109556373 (PTCH2)
09162 Cancer: specific types
05217 Basal cell carcinoma
109556373 (PTCH2)
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Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
109556373
NCBI-ProteinID:
XP_019813152
UniProt:
A0A6P5BIA9
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All DBs
Position
3:108038131..108053716
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AA seq
1214 aa
AA seq
DB search
MARPPPLGELPPGYTPPARPATPQILAGSLKAPLWLRAYFQGLLFSLGCGIQRHCGKVLF
LGLLAFGALALGLRVAIIETDLEQLWVEVGSRVSQELEYTKEKLGEEAAYTSQMLIQTPR
QEGENVLTPEALDLHLQAALTASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEKL
FPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPEQLLAELGPFASLEGFRELLDK
AQVGQAYVGRPCLHPDDLHCPPSAPNHHSRQAPNVAQELSGGCHGFSHKFMHWQEELLLG
GMARDPQGQLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEEQAGTVLQAWQRRFV
QLAQEALPENASQQIHAFSSTTLDDILHAFSEVSAARVVGGYLLMLAYACVTMLRWDCAQ
SQGAVGLAGVLLVALAVASGLGLCALLGIAFNAATTQVLPFLALGIGVDDIFLLAHAFTE
APPGSPLQERTGECLRRTGTSVTLTSINNMVAFFMAALVPIPALRAFSLQAAIVVGCNFA
AVMLVFPAVLSLDLRRRHCRRLDVLCCFSSPCSARVIQILPQELGNGTVPVGVAHLTATV
QAFAHCEASSQHVVTILPPQAQLVPPPSDPLGSELFSPGGSTRDLLGQEEGTGQKAACKS
LPCARWNLAHFARSQFAPLLLQSHTKLSRLSPQAVVLVLFGALLGLSLYGATLVQDGLAL
TDVVPRGTKEHAFLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQRFSSLKAVLPPP
ATQAPRTWLHYYRSWLQGIQAAFDQDWASGRITRHSYRNGSEDGALAYKLLVQTGDAQEP
LDFSQLTTKKLVDKEGLIPPELFYMGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTT
GENLRIPAAQPLEFAQFPFLLRGLQKTADFVEAIEGARAACAEASQAGVHAYPSGSPFLF
WEQYLGLRRCFLLAVCILLLCTFLVCALLLLNPWTAALIVLVLAMMTVELFGIMGFLGIK
LSAIPVVILVASIGIGVEFTVHVALGFLTAQGSRNLRAARALERTFAPVTDGAISTLLGL
LMLAGSNFDFIVRYFFVVLTILTLLGLLHGLVLLPVLLSILGPPPEVVQMYKESAEVLSP
PAPQGGGLRWGVPSTLPQSFARVTTSMTVALHPPPLPGAYIHPASEEPTWSPAATPAANG
PSNLGPRGLCPATG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggctcggccgccacctctcggggagctgcccccgggctacacacccccagctcgacct
gcaacaccccagatcctagctgggagcctgaaggctccgctctggctccgtgcttacttc
cagggcctgctcttctctttgggctgcgggatccagagacactgtggcaaagtgctcttc
ctgggactgttggcctttggggccctagcactgggtctccgcgtggccatcattgagaca
gacctagaacagctctgggtggaagtgggcagccgggtgagccaggaactggaatacacc
aaggagaagctgggggaggaggctgcgtatacctcccagatgttgatacagaccccgcgc
caggagggggagaacgtcctcacgcccgaggcacttgacctccacctccaggcagccctc
accgccagtaaagtgcaagtatccctctatggaaagtcctgggatctgaacaaaatctgc
tacaagtcaggagttcccctaattgaaaatggaatgattgagcggatgattgagaagctg
tttccctgcgtgatcctcacccccctcgactgcttctgggagggagccaaactccaaggg
ggctctgcctacttgccgggccgcccagacatccagtggaccaacctggacccagagcag
ctgctggcrgagctgggcccctttgcctcccttgagggcttccgggagctgctagacaag
gcacaggtgggccaggcctacgtggggcggccctgtctgcaccctgacgacctccactgc
ccacccagtgcccctaaccatcacagcaggcaggctcccaacgtggctcaggagttgagt
gggggctgccatggcttctcccacaagtttatgcactggcaggaggagctgctgctggga
ggcatggccagagacccccaaggacagctgctgagggcagaggccctgcagagcaccttc
ctgctaatgagcccccgccagctctacgagcacttccgaggtgactaccagacgcatgac
atcggctggagcgaggagcaggccggcacggtccttcaggcctggcagcgacgctttgtg
cagctggcccaggaggccctgcccgagaacgcatcccagcagatccacgccttctcctct
accaccctggacgacatcctgcacgccttctctgaagtcagcgctgcccgtgtggtgggg
ggctacctgctcatgctagcctatgcctgtgtgacratgctgcggtgggactgtgcccag
tcccagggtgcagtgggcctcgctggtgtgctgctggtggccctggcagtggcctcgggc
ctggggctctgtgccctgttgggcatcgccttcaacgctgccactacccaggtgctgcct
ttcttggcactgggcatcggcgtggacgacatattcctgctggcacacgccttcacagag
gctccacctggcagccctctccaggagcgcacgggggagtgtctgcgacgcacaggcacc
agtgtcacactcacatccatcaacaatatggttgccttcttcatggccgccctagttccc
atccctgcactgcgggccttctccttgcaggcagccatagtggtgggctgcaactttgca
gccgtgatgcttgtcttcccagcggtcctcagcctggacctgcggcggcgccactgccgg
cgcctggatgtgctctgctgcttctctagcccctgctctgctcgggtgattcagattctg
ccccaggagctggggaatgggacggtaccagtgggtgttgcccacctgactgccacggtt
caagcctttgcccactgtgaagccagcagccaacatgtggtcaccatcttgcctccccaa
gcccagctggtgccgccaccttctgaccctttgggctctgagctcttcagcccaggaggg
tccacacgggaccttctagggcaggaggaggggacagggcagaaggcagcctgcaagtcc
ctgccctgtgcccgctggaatcttgcccatttcgcccgctctcagtttgcacccttgttg
ctccagtcccacaccaagcttagtcgcctttccccacaggctgtagtactggtacttttt
ggggctctcctgggcctgagcctctatggagcgaccttggtgcaggacggtctggccctg
actgatgtggtgccgcgcggcaccaaggagcatgccttcctgagcgcccagctcaggtac
ttctctctgtatgaggtggctctggtgacacagggtggctttgactacgcccactcccaa
cgcgccctctttgatctgcaccagcgcttcagttccctcaaggccgtgctgcccccaccg
gccacccaggcaccccgcacctggctgcactactaccgcagctggctacagggaatccag
gctgcatttgaccaggactgggcttctgggcgcatcacccgccactcataccgcaatggc
tctgaggatggggccctggcatacaagctgctcgtccagaccggggatgcccaggagcct
ctagatttcagccagctgaccaccaagaagctggtggacaaggaagggctgatcccaccc
gagctcttctacatggggctgaccgtgtgggtgagcagtgaccccctgggtctggcagcc
tcacaggccaacttctatcccccacctcctgagtggctgcatgacaagtatgacaccacg
ggggagaatcttcgcatcccggcggcccagcccttggagtttgcccagttccccttcctc
ctgcgcggcctccagaagactgcagacttcgtggaggccattgagggggcccgggcagcg
tgtgctgaggccagccaggccggggtgcatgcctaccccagcggctcccccttcctcttc
tgggagcagtacctgggcctgcggcgctgcttcctgctggcagtctgcatcctgctgctg
tgtactttcctcgtctgtgccctgctgctgctcaacccctggacggctgcgctcatagta
ctggtcctggcgatgatgactgtggagctctttggcatcatgggtttcctgggcatcaag
ctgagtgccatcccggtggtgattcttgtggcctccataggcatcggtgtcgagttcacc
gtccacgtggctctgggcttcctgaccgctcagggtagccggaacctgcgggctgcccgg
gccctggagcgcacatttgctccagtgaccgatggggccatctccacgttgctaggtctg
ctcatgcttgctggctccaactttgacttcatcgtaaggtacttctttgtggtgctgaca
atacttacactcctgggcctcctccatgggctcgtgctgctgccggtactgctgtccatc
ctgggccccccaccagaggtggtacagatgtacaaggagagcgcagaggtcctgagcccc
ccagctccgcagggaggagggctcaggtggggggtaccctccaccctgccccagagcttt
gccagagtgactacctccatgactgtggccctccacccacccccactgcctggtgcctac
atccacccagcctctgaggagcctacttggtcgcctgctgccacaccagctgccaatggc
cccagcaacctcgggcctaggggactgtgtccagccacggggtga
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