KEGG   Bos indicus (zebu cattle): 109556449
Entry
109556449         CDS       T04792                                 
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
  KO
K08131  collagen type IX alpha
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu04151  PI3K-Akt signaling pathway
biu04510  Focal adhesion
biu04512  ECM-receptor interaction
biu04518  Integrin signaling
biu04820  Cytoskeleton in muscle cells
biu04974  Protein digestion and absorption
biu05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:biu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    109556449 (COL9A2)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109556449 (COL9A2)
   04518 Integrin signaling
    109556449 (COL9A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109556449 (COL9A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109556449 (COL9A2)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    109556449 (COL9A2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    109556449 (COL9A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:biu00535]
    109556449 (COL9A2)
Proteoglycans [BR:biu00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   109556449 (COL9A2)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 109556449
NCBI-ProteinID: XP_019813301
UniProt: A0A6P5B8U9
LinkDB
Position
3:112889234..112904414
AA seq 688 aa
MAPAADPRSLLVLLQVLGLALAQIRGLPGEPGPPGPPGPPGVPGSDGIDGDKGPPGKAGP
PGPKGEPGKAGTDGPDGKPGIDGLTGAKGEPGPAGIPGVKGQPGLPGPPGLPGPGFAGPP
GPPGPVGLPGEIGLTGPKGDPGPEGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPAG
VKGPPGLQGVKGHPGRRGLLGDSGRQGKPGPKGDVGASGEQGIPGPPGPQGVRGYPGMAG
PKGETGPQGYKGMVGSXGAAGSPGEEGPRGPPGRAGEKGDVGSQGVRGPQGITGPKGATG
PPGIDGKDGTPGTPGVKGSAGQAGRPGNPGHQGLAGVPGMPGTKGGPGDKGEPGRQGFPG
VSGPPGKEGEPGPRGEIGPQGIMGQKGDHGERGPVGQPGPQGRQGPKGEQGPPGIPGPQG
LPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGXPGYPGPSG
DAGAPGVQGYPGPXGPRGLVGDRGLPGQPGRQGVAGRDASDQHIEDVVLKMLQEQLAEMA
VSAKREALGATGMMGPPGPPGPPGXPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKRG
EKGDQGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGAPGAPGEAGXPGLPGPIGLP
GFCEPAACLGASAYASGRLTEPGSIKGP
NT seq 2067 nt   +upstreamnt  +downstreamnt
atggcccccgcggccgacccccgtagcctcctggttctcctgcaggtgctggggctcgcc
ctggcgcagatcagaggtctgccaggagagccggggcctccggggcccccagggccaccg
ggagtgcctggatccgacggaatcgacggtgacaaagggccccctgggaaagctggccct
ccgggacctaagggagagcctggcaaagcaggaacagatgggccagacgggaagcccggg
atagatggtctaactggagccaagggggagcccggtcctgcagggatccctggagtcaag
ggccagcctgggctcccaggtccccccggcctgccgggccctggcttygccggacctcct
ggaccacctggacctgttggcctccctggtgagattggactcacaggccccaagggggat
cctggaccagagggaccatcagggcctccgggaccccctgggaaaccgggccgccctgga
accattcagggtctggaaggcagcgcggatttcctgtgtccaaccaactgtccagcgggc
gtgaaagggcccccagggctgcagggcgtgaaggggcatccaggcagacgcgggcttctg
ggagattccggccgccaggggaagccgggtcccaagggagatgtgggtgcctctggagag
caaggcatccctggaccaccgggtccccagggtgtcaggggctacccaggcatggcagga
cccaaaggagagacgggccctcaggggtacaaaggcatggtgggctccrtcggcgcagcc
gggtcacctggtgaggaaggtccacggggaccaccgggccgagctggagagaagggtgat
gtggggagccaaggagttcgaggaccccagggaataacaggcccaaagggagcaaccgga
cccccaggcatcgacggcaaggatgggaccccaggcacgcctggagtgaagggcagtgca
ggacaggcagggcggccgggaaacccaggccaccagggcctagcgggtgtgcctggtatg
cctgggacaaaaggaggccctggagacaagggtgagccgggccggcagggcttccctgga
gtctctggtccccccgggaaggagggagagccagggcctcgaggagaaatcggtccccag
ggcatcatggggcagaagggtgaccacggtgagagggggccagtggggcagccaggccct
caaggtcggcagggccccaaaggggaacagggtcctcccggaattccagggccccaaggc
ttgccaggcatcaagggagacaagggttccccagggaagaccgggccccgcggtggagtg
ggcgacccgggggtggctggcctcccaggagagaaaggcgagaagggcgagtcaggcgag
ccaggccccaagggacagcaaggagtccgcggagracctggctaccccggccccagcgga
gatgcgggcgccccgggggtgcagggctacccggggcctcngggccctcgaggactggtt
ggagaccgaggcttgcccggacagcctgggaggcagggcgtggcgggccgagatgctagt
gaccagcacatcgaggacgtggtgctgaagatgctgcaagagcaattggcagaaatggct
gtgagtgccaagcgggaggccctgggtgcgactgggatgatgggtcccccaggaccccct
gggcctcctgggnacccaggcaaacagggaccccatgggcaccctggccctcggggtgtt
cctggcatcgtgggagccgtgggtcagattggcaacactgggcccaagggaaaacgtgga
gagaagggtgatcagggagaagttggccgtgggcaccccgggatgcctgggcccccgggg
atcccaggactgcctggccggcctggtcaggcaatcaacggcaaagatggagatcgaggg
gctccaggggccccaggagaggcaggtngacctggcctgccaggccccattgggctgcca
ggcttctgtgaacctgcggcctgccttggagcctcagcctatgcctctggacgcctcacg
gagcctggatccatcaaggggccatga

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