Bos indicus (zebu cattle): 109556522
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Entry
109556522 CDS
T04792
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
biu01009
]
109556522 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biu03021
]
109556522 (SFPQ)
03041 Spliceosome [BR:
biu03041
]
109556522 (SFPQ)
Protein phosphatases and associated proteins [BR:
biu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109556522 (SFPQ)
Transcription machinery [BR:
biu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109556522 (SFPQ)
Spliceosome [BR:
biu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109556522 (SFPQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
109556522
NCBI-ProteinID:
XP_019813433
UniProt:
A0A6P5BPR3
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All DBs
Position
3:117811637..117827618
Genome browser
AA seq
707 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPVPGQGGPKPQI
PPPPPHQQQQQPPPQQPPPQQPPPLQPPPHQPPHQQPPHQQPPPPPQDSSKSVVPQGPGS
APGVGSAPPATGSAPPATPPTSGAPTGPGPTPTPPPAVTSAPPGAPPPAPPSSGVPTTPP
QAGGPPPPPPAGGPVPGPKQGPGTGGPKGGKMPGGPKPGGNPGLSTPGGHPKPPHRGGGE
PRGGRQHHPPYHQQHHQGXXXGGPGGRSEEKISDSEGFKANLSLLRRPGEKTYTQRCRLF
VGNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGR
QLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFAS
KPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRF
AQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLM
RRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYSRM
GYMDPRERDMRMGGGGAMNMGDPYGSGGQKFPPLGGGGGIGYEANPGVPPATMSGSMMGS
DMRTERFGQGGAGPVGGQGPRGMGPGTPAGYGRGREEYEGPNKKPRF
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggaccggttccgaagccggggcggtggcggtggcggcttccaccgacgcgga
ggaggaggcggccgcggcggtctccacgacttccgctccccgccgcccggcatgggcctc
aatcagaatcgcggacccatggggcccgtgccgggccaaggtggccccaagcctcagatc
ccgccaccgcctcctcaccagcaacagcagcagccaccgccgcagcagccgccaccacag
cagccgccgccgcttcagcccccgccgcaccagccgccccatcagcagccgccgcaccag
cagccgccgccgccgccacaggactcatctaagtctgttgttcctcaaggacccggttcg
gctcccggagtaggcagcgcccctccggccaccggctcggcgccgcccgccacacccccg
acctcgggggcccccacggggccaggccccaccccgaccccgccgcccgctgtcacctcg
gcgcccccaggtgcgcctccaccggctccgccgagcagtggggtgcccaccaccccccct
caggctgggggcccgccgcctccaccacctgcagggggcccggtgcccgggcctaagcag
ggcccgggaaccggcggccccaagggcggcaaaatgccaggcgggccgaagcctggcggc
aacccgggcctaagcactcctggcggccaccctaagccgccgcaccgaggtggcggggag
ccccgcgggggccggcagcaccatccgccctaccaccagcagcaccaccaagggnnnnnn
nccggagggcccggcggccgcagcgaggaaaagatttcggactctgaggggtttaaagcc
aacttgtcactcctgaggaggcctggagagaaaacttacacccagcggtgtcggttgttt
gttggtaatctacctgcagacatcacggaggatgaattcaaaagactttttgctaaatat
ggagaaccaggagaagtttttataaacaaaggcaaaggatttggatttattaagcttgaa
tctagagcgttggctgaaatagctaaagctgaacttgatgatacacccatgagaggtaga
cagcttcgggttcgatttgccacacatgctgctgccctttctgttcgaaatctttcacct
tatgtttccaatgaactgttggaagaagcctttagccagtttggtcctattgaaagggct
gttgtaattgtggatgatcgtggaagatctacagggaaaggcattgttgaatttgcttct
aaaccagcagcaagaaaagcatttgaaagatgcagtgaaggtgttttcttactgacaaca
actcctcgtccagtcattgtggaaccacttgaacagttagatgatgaagacggtcttcct
gaaaaacttgcccagaagaatccaatgtatcaaaaggagagagaaacccctcctcgtttt
gcccagcatgggacatttgagtatgagtattctcagcggtggaagtcccttgatgaaatg
gaaaaacagcagcgggaacaagttgaaaaaaacatgaaagatgcaaaagacaaattggaa
agtgaaatggaagatgcctatcatgagcatcaggcaaatcttttgcgtcaagatctaatg
cgacgccaggaagaattaagacgcatggaagaactgcacaatcaagaaatgcagaaacgt
aaagagatgcaattgaggcaagaggaagaacgacgtaggagggaagaagagatgatgatt
cgtcaacgtgagatggaagaacagatgagacgccaaagagaggaaagttatagtcggatg
ggctatatggatccaagagaaagagacatgagaatgggtggtggaggagcaatgaacatg
ggagatccctatggctcaggaggccagaaatttccacctctaggtggtggtggtggcata
ggttatgaagctaatcctggcgttccaccggcaacaatgagtggttccatgatgggaagc
gacatgcgtactgagcgctttgggcagggaggtgcgggacctgtgggtggacagggtcct
agaggaatggggcctggaactccagcaggatatggtagagggagagaagagtatgaaggc
ccaaacaaaaaaccccgattttag
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