Bos indicus (zebu cattle): 109556606
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Entry
109556606 CDS
T04792
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04136
Autophagy - other
biu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109556606 (ATG4B)
04136 Autophagy - other
109556606 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
biu01002
]
109556606 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109556606 (ATG4B)
03029 Mitochondrial biogenesis [BR:
biu03029
]
109556606 (ATG4B)
Peptidases and inhibitors [BR:
biu01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
109556606 (ATG4B)
Membrane trafficking [BR:
biu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
109556606 (ATG4B)
Mitochondrial biogenesis [BR:
biu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109556606 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
109556606
NCBI-ProteinID:
XP_019813623
UniProt:
A0A6P5B588
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All DBs
Position
3:126674765..126684754
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AA seq
319 aa
AA seq
DB search
MLRCGQMIFAQALVCRXXGRDWRWTQRKRQPDSYCSVLQAFLDRKDSCYSIHQIAQMGVG
EGKSIGQWYGPNTVAQVLKKLAVFDTWSALAVHVAMDNTVVMADIRRLCRSSLPCAGAEA
FPADSERHCNGFPAGAEGGGRAAPWRPLVLLIPLRLGLADVNAAYAGTLKHCFRMPQSLG
VIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVAAADRCPVPDESFHCQHPPGRMSIAELD
PSIAVGFFCETEDDFNDWCQQVRKLSLLGGALPMFELVEQQPSHLACPDVLNLSLDSSDA
ERLERFFDSEDEDFEILSL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggtgcggacagatgatcttcgcccaggccctggtgtgccggcnnnngggccgc
gactggaggtggacgcagcggaagaggcagccggacagctactgcagcgtcctgcaggcg
ttcctggacaggaaggacagctgctactccatccatcagatagcacaaatgggagtcggc
gagggcaagtccatcggccagtggtacgggcccaacaccgtcgcccaagtcctcaagaag
ctggctgtcttcgacacctggagcgccctggctgtgcatgtggcaatggacaacacagtg
gtgatggcggatatcaggaggttatgcaggagcagccttccctgtgccggggccgaggcc
ttccccgcagactccgagcggcattgcaacggctttccggcaggggccgagggcggcggg
cgcgcggcaccctggagacccttggtgctgctcatcccgctgcgcctggggttggcagac
gtcaacgcggcctacgcgggcacgctcaagcactgcttccggatgccccagtccctgggc
gtgatcggagggaagcccaacagtgcccactacttcatcggctacgttggggaggagctc
atctacctggacccccacaccacgcagccagccgtggcggctgctgaccgctgcccggtc
ccggacgagagcttccattgccagcacccgccgggcaggatgagcatcgcggagctcgac
ccgtctatcgccgtggggttcttctgtgagaccgaggatgactttaacgactggtgtcag
caagtgagaaagctgtccctgctgggaggcgccctgcccatgtttgagctggtggagcag
cagccttcccacctggcctgtcccgacgtcctcaacttgtccttagactcttctgacgcg
gagcgactggaaagattctttgactcagaagaygaagactttgagatcctgtccctctga
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