Bos indicus (zebu cattle): 109556806
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Entry
109556806 CDS
T04792
Symbol
ABCA4
Name
(RefSeq) retinal-specific ATP-binding cassette transporter
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109556806 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
biu02000
]
109556806 (ABCA4)
Transporters [BR:
biu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109556806 (ABCA4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
DrrA1-3_C
AAA_29
Motif
Other DBs
NCBI-GeneID:
109556806
NCBI-ProteinID:
XP_019813776
LinkDB
All DBs
Position
3:52716410..52838688
Genome browser
AA seq
2124 aa
AA seq
DB search
MGFARQIKLLLWKNWTLRKRQKGGFQCCFSFLQFARGVPDLMLKDIACSEALLERFLIFP
QRRAAQTVRGSLCSLSQGTLQWMEDTLYANVDFFKLFHVFPRLLDSRSQGMNLRSWGRIL
SDMSPRIQEFIHRPSVQDLLWVTRPLVQTGGPETFTQLMGILSDLLCGYPEGGGSRVFSF
NWYEDNNYKAFLGIDSTRKDPIYSYDERTTTFCNALIQSLESNPLTKIAWRAAKPLLMGK
ILFTPDSPATRRILKNANSTFEELERVRKLVKVWEEVGPQIWYFFDKSTQMSMIRBTLEN
PTVKAFWNRQLGEEGITAEAVLXFLYNGPREGQADDVDNFNWRDIFNITDRALRLANQYL
ECLILDKFESYDDEFQLTQRALSLLEENRFWAGVVFPDMHPWTSSLPPHVKYKIRMDIDV
VEKTNKIKDRYWDSGPRADPVEDFRYIWGGFAYLQDMVEXGITRSQAREEVPVGIYLQQM
PYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVKSIVLEKELRLKETLKNQGVSNRVIW
CTWFLDSFSIMSMSICLLTIFIXHGRILHYSNPFVLFLFLLAFSIATIMQCFLLSTFFSR
ASLAAACSGVIYFTLYLPHILCFAWQDRITADMKMAVSLLSPVAFGFGTEYLARFEEQGV
GLQWSNIGNSPMEGDEFSFLMSMKMMLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQE
SYWJGGEGCSTREERALEKTEPITEEMEDPEYPEGINDCFFERELPGLVPGVCVKNLVKI
FEPYGRPAVDRLNITFYESQITAFLGHNGAGKTTTLSIMTGLLPPTSGTVLVGGKDIETN
LDAIRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWDEAQLEMEAMLEDTGLHHKRNE
EAQDLSGGVQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMST
HHMDEADILGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRRMKTIQSQGRGXEATC
SCASKGFSVRCPACAEAITPEQVLDGDVNELTDXVHHHVPEAKLVECIGQELIFLLPNKN
FKQRAYASLFRELEETLADLGLSSFGISDTPLEEIFLKVTEDLDSGHLFAGGTQQKRENI
NLRHPCSGPSEKAGQTPQGSSSHPXEPAAHPEGQPPPEREGHSRLNSGARLIXQHVQALL
VKRFQHTIRSHKDFLAQIVLPATFVFLALMLSLIIPPFGEYPALTLHPWMYGQQYTFFSM
DQPDSEWLSALADVLVNKPGFGNRCLKEEWLPEFPCGNSSPWKTPSVSPDVTHLLQQQKW
TADQPSPSCRCSTREKLTMLPECPEGAGGLPPPQRIQRSTEILQDLTDRNVSDFLVKTYP
ALIRSSLKSKFWVNEQRYGGISVGGKLPAPPFTGXALVGFLSDLGQLMNVSGGPMTREAA
KEMPAFLKQLETEDNIKVWFNNKGWHALVSFLNVAHNAILRASLHKDKNPEEYGITXISQ
PLNLTKEQLSEITVLTTSVDAVVAICVIFAMSFVPASFVLYLIQERVNKAKHLQFVSGVS
PTTYWLTNFLWDIMNYTVSAALVVGIFIGFQKKAYTSSENLPALVALLMLYGWAVIPMMY
PASFLFDIPSTAYVALSCANLFIGINSSAITFVLELFENNRTLLRINAMLRKLLIIFPHF
CLGRGLIDLALSQAVTDVYARFGEXHSSNPFQWDLIGKNLAAMAVEGVVYFLLTLLIQYQ
FFFSRWTTEPAKEPITDEDDDVAEERQRIISGGNKTDILRLNELTKVYSGTSSPAVDRLC
VGVRPGECFGLLGVNGAGKTTTFKMLTGDTAVTSGDATVAGKSILTNISDVHQSMGYCPQ
FDAIDDLLTGREHLYLYARLRGVPAEEIERVTNWSIQSLGLSLYADRLAGTYSGGNKRKL
STAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIMGIIREGRAVVLTSHSMEECEALCTR
LAIMVKGAFQCLGTIQHLKSKFGDGYIVTMKIRSPKDDLLPDLGPVEQFFQGNFPGSVQR
ERHYNMLQFQVSSSSLARIFRLLVSHKDSLLIEEYSVTQTTLDQVFVNFAKQQNETYDLP
LHPRAAGASRQAKEVDKGNSAPQG
NT seq
6375 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgccagacagatcaagcttctgctgtggaagaactggaccctgcggaaaagg
caaaagggaggtttccagtgttgcttttcctttctgcagtttgctcgtggagtcccagac
ctgatgctgaaggacatcgcctgcagcgaggccctcctggagcgtttcctgatctttccc
cagcgccgtgcagcccagacagtgcgtggcagcttgtgctccctctctcagggaacccta
cagtggatggaagacaccctgtacgccaacgtggacttcttcaagctcttccaygtgttt
cccagactcctagacagccgttctcaaggtatgaatctgagatcctggggaagaatatta
tctgatatgtcaccaagaattcaagaattcatccaccggccaagtgttcaagacttgctg
tgggtgaccaggccactcgtgcagactggtggcccggagaccttcacgcagctgatgggc
atcctgtctgacctcttgtgtggctaccccgagggaggaggatctcgggtgttctccttc
aactggtaygaagacaataactataaggcctttctaggratcgactccacaaggaaagat
cctatctattcttatgacgaaagaacaacaaccttttgtaacgcattgatccagagcctg
gagtcaaaccctctaaccaaaatagcctggagggcagcaaagcctttgttgatgggaaaa
atcctctttactccagattcccctgcaacacgcaggatactgaagaatgctaattcgacg
tttgaagagctggagcgtgtcaggaagttggtcaaagtctgggaagaagtagggccccag
atctggtacttctttgacaagagcacacagatgagcatgatcagaracactctggagaac
ccaacagtaaaagctttttggaataggcagcttggtgaggaaggcatcactgctgaagcc
gtcctgarcttcctctataacgggcctcgagagggccaggctgacgatgtggacaacttc
aactggagggatatatttaacatcactgatcgtgccctacgcctggctaatcaatatctg
gagtgcttgatcctggataagtttgaaagctacgatgatgaatttcaactcactcagcga
gccctgtccctgctggaggaaaacaggttctgggctggagtggtatttccggacatgcac
ccctggaccagttccttaccaccccatgtgaagtacaagatccgaatggacatagatgtg
gtggagaaaaccaataagatcaaagacaggtactgggattctggccccagagctgatcct
gtggaagacttccgatacatctggggagggtttgcctatctgcaggacatggttgaacak
gggatcacgaggagtcaggcccgggaggaggttccggttggaatctatctccagcagatg
ccttacccctgcttcgtggatgactcttttatgatcatcctgaaccgctgtttccctatc
ttcatggtgctggcctggatctactctgtctccatgactgtaaagagcattgtcttggag
aaggagttgagactgaaggaaaccttgaaaaatcagggtgtctccaacagggtgatttgg
tgtacctggttcctggacagcttctctatcatgtcgatgagcatctgcctgctgacaata
ttcatcrtgcatggaaggatcctgcattacagcaatccgttcgtcctcttcctgttcctg
ttggctttctccattgctacratcatgcagtgcttcctgctcagcaccttcttctccagg
gccagtctggcagcagcctgcagtggtgtcatctacttcaccctctacctgccacacatt
ctctgcttcgcttggcaggaccgaattacagccgacatgaagatggctgtgagcctgctg
tctcctgtggcatttgggtttggcactgagtacctggctcgttttgaagagcaaggtgtg
gggctgcagtggagcaatattgggaacagtcccatggaaggggatgaattcagttttctg
atgtccatgaagatgatgctccttgatgctgctctgtatggcttgcttgcctggtatctt
gaccaggtgttcccaggggactatggaaccccacttccttggtacttccttctacaagag
tcttactggmtaggtggtgaaggctgttcaaccagagaagaaagagccttggaaaagaca
gaaccaataacagaggaaatggaggacccagaatacccagaaggaataaatgactgcttc
tttgaacgtgagcttccaggcttggttcccggagtatgtgtgaagaatctggtaaagata
tttgagccctatggcaggccagccgtggaccgtcttaacattaccttctatgaaagtcag
attaccgcattcctcggtcacaatggagcagggaaaaccacgactttgtccatcatgacc
ggtctgttgccaccgacatccgggactgtgcttgttgggggaaaggacattgaaaccaac
ctggatgctatccggcagagccttggcatgtgtccacagcacaacatcctgttccaccac
ctcaccgtggctgaacacatcctgttctacgcgcagctgaaagggaggtcctgggacgag
gcccagctggagatggaagcaatgctggaggacacaggcctccaccacaagaggaacgaa
gaggctcaggatctgtcaggtggcgtgcagaggaagctgtctgtggccattgccttcgtg
ggagatgccaaggtggtggttctggatgagcccacctctggggtggacccctactcacgt
cgctcaatctgggacctgctcctgaagtatcgctcaggcagaaccatcatcatgtccact
caccacatggacgaggccgacatcctcggggaccgcatcgccatcatatcccagggacgg
ctctactgctctggaaccccactgttcctgaagaactgctttggcacaggcttctactta
accttggtgcgcaggatgaagactattcagagccaaggaagaggccrcgaggcgacctgc
agctgtgcrtctaagggcttctccgtcaggtgtccggcctgtgccgaggcgataactcca
gaacaagtcttggacggggatgtgaatgaactgacggatatrgttcaccaccatgttcca
gaggcgaagctggtagaatgcattggtcaagaacttatcttccttcttccaaataagaat
ttcaagcagagagcatatgctagccttttcagagagctggaggagacgctggctgacctg
ggactcagcagttttggaatttctgacactcccctggaagagattttcctgaaggtcaca
gaggatttggattcaggacatctgtttgctggaggcactcagcagaaaagagaaaacatc
aaccttcgacacccctgttcgggtcctagcgagaaggccggacagactccccagggctcc
agcagccaccccrgagagccagctgctcacccggagggccagcctccaccggagcgggag
ggacacagccgactgaactcaggagckmggcttattgyccagcacgtgcaggcactgctg
gtcaagaggttccagcacaccatccgcagccacaaggacttcctggcccagattgtgctc
ccggccacttttgtgtttttggctctaatgctttccctcatcatccctccttttggtgaa
tatcctgctttgacccttcacccctggatgtatggacagcagtacaccttcttcagcatg
gaccagccggacagtgaatggctctcagcacttgcagatgtccttgtgaataagccaggc
tttggcaaccgctgcctgaaggaagagtggcttccggagttcccctgtggaaattcaagc
ccctggaagactccatctgtgtccccggaygtcacccacttgctccaacagcagaaatgg
acagcggaccaaccttcaccttcctgcaggtgcagcaccagagagaagctcaccatgctt
cctgagtgccctgagggcgcagggggcctcccacccccgcagagaatacaacgcagcact
gaaattctgcaggaccttacagacaggaatgtctccgacttcctggtaaaaacatatcct
gctcttatccgaagcagtttgaagagcaaattctgggtcaatgaacagaggtatggagga
atttctgtcggaggaaagctcccagctccccccttcactggaraagcacttgttggattt
ttaagtgaccttggccagttaatgaatgtgagcgggggccctatgaccagagaggctgct
aaagaaatgcctgctttccttaaacaactagaaactgaagacaatattaaggtgtggttt
aacaacaaaggttggcatgctctggtcagcttcctcaacgtggcccacaacgccatctta
cgggctagcctgcacaaggacaagaaccccgaggagtatggcatcaccrtcataagccag
cccttgaacctgaccaaggagcagctctctgagatcacagtactgaccacttcggtggac
gctgtagtggccatctgcgtgatttttgccatgtccttcgtccctgccagctttgtcctt
tatttgatccaggagagggtgaacaaggccaagcacctccagtttgtcagcggagtgagc
cccaccacctactggctgaccaacttcctctgggacatcatgaattacactgtaagtgct
gcactggtggtgggcatcttcatcgggtttcagaagaaagcctacacttcttcagagaac
cttccagcccttgttgcgctgctcatgctgtatgggtgggcagtcattcccatgatgtat
ccggcatccttcctgttcgatatccccagcactgcctatgtggccttatcttgtgctaat
ctgttcattggcatcaacagcagtgccatcactttcgtcctggaattatttgagaataac
cggacgctgctcaggatcaatgccatgctgaggaagctgctcattatcttcccccacttc
tgcctgggccggggtctcattgacctggcactgagccaggcagtgacagacgtctatgcc
cggtttggtgaggmgcactcttcaaatccattccagtgggacctgattgggaaraacctg
gctgccatggcagtagaaggtgtggtgtacttcctcttgacgctcctcatccaataccag
ttcttcttcagccgatggactaccgagcctgcaaaggagcccatcacagatgaagatgat
gatgtggctgaagaaaggcagagaattattagtggaggaaataaaactgatatcttaagg
ctaaatgaactcaccaaggtttattcaggcacctccagcccagcagtggacaggctgtgt
gtgggagtccgccctggagagtgctttggtctcctgggtgtgaacggagctggcaaaacc
accacattcaagatgctcactggggacaccgcagtgacctcaggcgatgccactgtcgca
ggcaagagtattttgaccaatatttctgacgtccatcaaagtatgggctactgtcctcag
tttgatgcaatcgatgacctgcttactgggcgagaacatctttacctttatgcccggctt
cgaggtgtaccagcagaggaaattgagagggtgacaaactggagtattcagagcctgggc
ctgtctctctatgcagaccgcctggccggcacctacagtggaggaaataagcggaaactc
tccacagccattgcgctcataggctgccccccactggtgctgctggatgagcccaccaca
ggcatggacccccaggcacgccgcatgctgtggaacactatcatgggcatcatcagagaa
gggagagccgtggtcctcacttcccacagcatggaagagtgcgaggccctgtgtacccgg
ctggccatcatggtgaagggcgcctttcagtgtctgggcaccatccagcacctcaagtcc
aagtttggagacggctacattgtcacgatgaaaatcaggtccccaaaggacgacttgctt
cctgacctgggtccggtggagcagttcttccagggcaacttcccaggcagcgtccagagg
gagcggcactataacatgctgcagttccaggtctcctcctcctccctggctaggatcttc
cggctgctcgtctcccacaaggacagcctgctcatcgaggagtactcggtcacgcagacc
acactggaccaggtatttgtgaactttgctaaacagcagaatgaaacttacgacctccct
ttgcaccctcgagctgcaggagccagccgacaggccaaggaagtggacaaagggaattct
gcacctcaagggtga
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integrated database retrieval system
