KEGG   Bos indicus (zebu cattle): 109556819
Entry
109556819         CDS       T04792                                 
Name
(RefSeq) transcription initiation factor IIB-like
  KO
K03124  transcription initiation factor TFIIB
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03022  Basal transcription factors
biu05017  Spinocerebellar ataxia
biu05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109556819
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    109556819
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    109556819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:biu03021]
    109556819
Transcription machinery [BR:biu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     109556819
 Prokaryotic type
  Archaeal type
    TFB
     109556819
SSDB
Motif
Pfam: TFIIB BRF2-like_C_cyclin_rpt Sigma70_r4 HcyBio
Other DBs
NCBI-GeneID: 109556819
NCBI-ProteinID: XP_019813785
LinkDB
Position
3:58444924..58464931
AA seq 178 aa
MTFNTVRFLKGPNKSFENVNPAKHKNKDRWIDLFKLLLSLEICAVSRISKKEIGRCFKLI
LKALETSVDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAI
YMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPTDFKFDTPVDKLPQL
NT seq 537 nt   +upstreamnt  +downstreamnt
atgacgtttaacacagtgagatttcttaaaggtccaaacaagagttttgagaatgtaaat
ccagctaaacataagaataaagacaggtggattgatttatttaaacttcttttgtcttta
gaaatatgcgctgtatcacgaatttctaagaaagaaattggtcgatgttttaaacttatt
ctgaaagctttagaaaccagtgtggatttgattacaactggggacttcatgtccaggttt
tgttccaacctttgtcttcctaagcaagtacagatggcagcgactcatatagcccgtaaa
gctgtggagctggatttggttcctggaaggagcccgatatctgtggcagcagctgctatt
tacatggcctcacaggcatcagctgagaaaaggacccaaaaagagattggagatattgct
ggtgttgctgatgttacaatcaggcagtcgtacagactaatctatcctcgggccccagat
ctgtttcctacagacttcaagtttgacacccctgtggacaaattaccacagctataa

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