Bos indicus (zebu cattle): 109556834
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Entry
109556834 CDS
T04792
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1
KO
K13210
far upstream element-binding protein
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109556834 (FUBP1)
03041 Spliceosome [BR:
biu03041
]
109556834 (FUBP1)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
109556834 (FUBP1)
Spliceosome [BR:
biu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109556834 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
109556834
NCBI-ProteinID:
XP_019813792
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All DBs
Position
3:71226118..71255617
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AA seq
685 aa
AA seq
DB search
MGTDNKNAINIPWFCLTCEAGISYTTFAPERGSIIDLDVQLPRFPPHLHISLEKDCPEEI
AAKIGGDAGTSLNSNDYGYGGQKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMT
EEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKR
LLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMI
QDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPI
PRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDL
LRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSI
SQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGP
HGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAP
PDPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGNYGDQQNPAPAGQ
VDYTKAWEEYYKKMGQQGQTQDYSKAWEEYYKKQGQAVPAPTGAPPGGQPDYSAAWAEYY
RQQAAYYAQTSPQGMPQHPPAPQGQ
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgggaacagataataaaaatgccataaatatcccctggttttgcctcacttgtgaggct
ggtatttcttatacaacgtttgccccagaacgtggttctataatagacttagatgtacaa
cttcccaggtttcccccacacctccacatttccttagaaaaagattgtccagaagaaatt
gcagcaaaaattggaggtgatgctggtacgtcactgaattcaaatgactatggttatggg
ggacaaaaaagacctttggaagatggagatcagccagatgctaagaaagttgctcctcaa
aatgactcttttggaacacagttaccaccaatgcatcagcagcaaaggtctgtaatgaca
gaagaatacaaagttccagatggaatggttggatttataattggcagaggaggtgaacag
atctcacgcatacaacaggaatctggatgtaaaatacagatagctcctgatagtggtggc
cttccagaaaggtcttgtatgttaactggaacacccgagtctgtccaatcagcaaaacgg
ttactggaccagattgttgaaaaaggaagaccagcccctggcttccatcatggtgatgga
ccaggaaatgcagttcaagaaatcatgattccagctagcaaagcaggattagtaattgga
aaagggggagagactattaaacaacttcaggaacgggctggagttaaaatggttatgatc
caagatggacctcagaatactggtgctgacaaacctcttaggattacaggagacccatac
aaagttcaacaagccaaggagatggtgttagagttaattcgtgatcaaggtggtttcaga
gaagttcggaatgagtatgggtcaagaataggaggaaatgaaggaatagatgtccccatt
ccaagatttgctgttggcattgtaataggaagaaatggagagatgattaaaaaaatacaa
aatgatgctggtgttcgaattcagtttaagccagatgatggaacaacacctgatagaata
gcacaaataacaggacctccagacagatgtcagcatgctgcagagattattacagacctc
cttcgaagtgttcaggctggtaatcctggtggacctggacctggtggtcgaggaagaggt
agaggtcaaggcaactggaacatgggaccacctggtggactacaggaatttaatttcatt
gtcccaactgggaaaactggattaataataggaaaagggggtgaaaccataaaaagcata
agccaacagtctggtgcaagaatagaacttcagagaaatcctccacctaatgcagatcct
aatatgaagttatttacaattcgtggcactccacagcaaatagactatgctcggcaactc
atagaagaaaagattggtggcccagtaaatcctttagggccacctgtaccccatgggccc
catggtgtccctggcccccatgggcctcctgggcctcctggaccaggaactccaatggga
ccatataaccctgcaccttataatccaggaccgcctggccctgctcctcatggccctcca
gccccttatgctccccaagggtggggaaatgcatacccacattggcagcaacaagcccct
ccagatccagctaaaacaggaacggatccaaattcagcagcttgggctgcttattatgct
cactattaccagcaacaagcacagccaccacctgcagctcctgctggtgcaccaactaca
acccaaaccaatggacaaggtaactatggagatcagcagaatccagctccagctggacag
gttgattataccaaggcttgggaagagtactacaagaaaatgggtcaacaagggcagaca
caagattattcaaaggcttgggaggaatattacaagaagcaaggtcaagcagttcctgct
cctactggtgctccaccaggtggtcagccagattatagtgcagcctgggctgagtactat
agacaacaagcagcctactatgcccagacaagtccccagggaatgccacagcatcctcca
gcacctcagggccaataa
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