Bos indicus (zebu cattle): 109557566
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Entry
109557566 CDS
T04792
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04140
Autophagy - animal
biu04148
Efferocytosis
biu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109557566 (VPS41)
04148 Efferocytosis
109557566 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109557566 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109557566 (VPS41)
Membrane trafficking [BR:
biu04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
109557566 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
ANAPC4_WD40
Vps39_2
Vps39_1
zf-RING_5
RIG-I_C
zf-rbx1
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
109557566
NCBI-ProteinID:
XP_019814542
UniProt:
A0A6P5BKG7
LinkDB
All DBs
Position
4:85045362..85233497
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AA seq
854 aa
AA seq
DB search
MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQVSLDESGEHMGVCAEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMSRWKSSVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKI
CSVKERHANEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVARGEYDIAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEFDRPNLLPFLRDSIHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDAELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGILVDEENICESCLSPILPSDAAKPFSMVVFHCRHMFHKECLPVPSMTSPAQFCNICSA
KHRGPGSAILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcagaggagcaggaaactggatctctggaagaatctacagatgagtctgag
gaagaagagagtgaagaggagcccaaactgaagtaygaaaggctctccaatggggtaact
gaaatccttcagaaggatgctgctagctgcatgacggtccatgacaagttcttggcactg
ggcacacattatggcaaggtttatttacttgatgtccaggggaacatcactcagaagttt
gatgtaagtcctgtgaagataaatcaggttagcctggatgaaagtggagaacacatgggc
gtgtgtgcagaggatggcaaggtgcaggtgtttggactgtattctggagaagaatttcat
gagacttttgactgtcccattaaaatcattgctgtgcacccgcattttgtgagatccagc
tgcaagcagtttgtgacgggagggaagaagttgctgctgtttgaacgatcttggatgagc
agatggaagtcttcagttctgcatgaaggggaagggaacataaggagtgtgaagtggagg
ggccatctgattgcctgggccaataatatgggcgtgaagatttttgacatcacctcaaag
cagagaatcacgaacgtgccccgggatgatataagtcttcgcccagatatgtatccctgt
agcctctgctggaaggacaatgtgacgctgatcattggctgggggacgtctgtcaagata
tgctccgtgaaggaacggcacgccaatgaaatgagggacttgccaagtcgatatgttgaa
atagtgtctcagtttgaaactgaattctacatcagtggactggcacctctctgtgatcag
cttgttgtactttcctacgtaaaggaggtttctgaaaaaacggaaagagaatactgcgcc
agacccagattggatatcatccagccactttcggagacttgtgaagagatttcttctgat
gctctcaccgtgaggggctttcaggaaaatgaatgtagagattatcacttagagtactca
gaaggggagtcactcttctacatcgtgagtccaagggatgttgttgtagcgaaggaacga
gaccaagatgaccacatcgactggcttcttgaaaagaagaaatatgaagaagctttgatg
gcagctgaaattagccaaaagaacattaaaagacataagattctggacatcggcttggcg
tatataaaccacctggtggcaagaggagagtatgatatagcagcacgcaaatgccagaaa
attcttgggaaaaatgcagcactctgggaatacgaagtttataaatttaaagaaattgga
cagcttaaggcgattagtccttatttgccaagaggggatccagttctgaaaccactcatc
tatgaaatgatcttacatgaatttttggaaagtgattatgagggktttgccacgttgatc
cgagaatggccgggagatctgtacaacaattcagtaatagttcaagcggttcgggatcac
ctgaagaaagatagtcagaacaggaccttacttaaaaccctggcagaattgtacacctat
gacaaaaactatggcaatgctttggaaatatacctaacattaagacacaaggatgttttc
cagttgatccacaaacataatcttttcagttctatcaaggataaaattgttttattaatg
gattttgattctgagaaagctgttgacatgcttctggacaatgaagataaaatttcaatt
aaaaaagtagtggaagaattagaagacagaccagagttgcagcacgtgtatctgcataag
cttttcaaaagagaccaccataagggacagcgctaccatgagaagcagatcagcctttat
gctgaattcgaccgacccaacttgcttccatttctccgagacagtatccattgccccctt
gaaaaggctcttgagatctgtcaacagagaaactttgtagaagagacggtttatcttctc
agccgaatgggtaacagccgaagtgccctgaagatgatcatggaggaattgcatgatgtt
gataaagcgattgaatttgccaaggagcaggacgatgcagaactctgggaagatctgatt
ttatattccatcgacaaaccaccatttatcaccggcttgttaaacaacattggcactcat
gttgacccaattctactaattcaccgtattaaggaaggaatggagattcctaatttgaga
gactccttagttaaaattctacaagactacaatttacaaattctgcttcgtgaaggctgt
aagaagattctcgtagccgactcactgtccttactcaagaagatgcaccgaactcaaatg
aaaggcattctggttgatgaggagaacatctgtgagtcctgcctttcccctattcttcca
tcagacgcagcaaagcccttcagcatggtggtcttccactgccggcatatgttccacaag
gagtgcctgcccgtgcccagcatgacctctcctgcgcagttctgtaacatctgcagtgcg
aagcaccggggaccaggaagtgccattttggagatgaaaaaatag
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