Bos indicus (zebu cattle): 109557709
Help
Entry
109557709 CDS
T04792
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04390
Hippo signaling pathway
biu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
109557709 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
109557709 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109557709 (SOX2)
Transcription factors [BR:
biu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109557709 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109557709
NCBI-ProteinID:
XP_019814768
UniProt:
A0A6P5B8P6
LinkDB
All DBs
Position
1:complement(87382135..87384631)
Genome browser
AA seq
321 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQR
RKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKT
KTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQD
QLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMA
LGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPXXXVPEPAAPSRLHMSQ
HYQSGPVPGTAINGTLPLSHM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccagaagaac
agcccggaccgagtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcgg
cgcaagatggcccaagagaaccctaagatgcacaattcggagatcagcaagcgcttgggc
gccgagtggaaacttttgtccgagacggagaagcggccgttcatcgacgaggccaagcgg
ctgcgagcgctgcacatgaaggaacacccggattataaataccggccccggcggaaaacc
aagacgctcatgaagaaggataagtacacactgccgggagggctgctcgccccgggcggc
aacagcatggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaaccagcgc
atggacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggac
cagctgggctacccgcaacacccgggcctcaacgcgcacggcgccgctcagatgcagccc
atgcaccgctacgacgtgagcgccctgcagtacaactctatgaccagctcgcagacctac
atgaacggctcgcccacctacagcatgtcctattctcagcagggcacccctggcatggcg
cttggctccatgggctcggtggtgaagtccgaggccagctccagcccccccgtggttacc
tcttcttcccactccagggcgccctgccaagccggggacctccgggacatgatcagcatg
tacctcccnnnnnnnnnggtgccggagcccgccgcccccagcagacttcacatgtcccag
cactaccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcgcac
atgtga
DBGET
integrated database retrieval system
