Bos indicus (zebu cattle): 109557884
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Entry
109557884 CDS
T04792
Name
(RefSeq) reelin
KO
K06249
reelin [EC:3.4.21.-]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04151
PI3K-Akt signaling pathway
biu04510
Focal adhesion
biu04512
ECM-receptor interaction
biu05017
Spinocerebellar ataxia
biu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
109557884
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109557884
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109557884
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
109557884
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
109557884
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reelin_subrepeat-B
BNR
EGF_2
EGF_Tenascin
EB
Motif
Other DBs
NCBI-GeneID:
109557884
NCBI-ProteinID:
XP_019814983
UniProt:
A0A6P5B9G7
LinkDB
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Position
4:complement(46411548..46626211)
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AA seq
1923 aa
AA seq
DB search
MAHAPTEATVHPHLAEIHSDSIILRDDFDSYHQKELNPNIWVECNNCETGEQCGAIMHGN
AVTFCEPYGPRELITTGLNTTTASVLQFSIGSGSCRYSYSDPCIIVSYAKNNTADWIQLE
KIRAPSNVSTIIHILYLPEDAKGENVQFQWKQENLQVGEVYEACWALDNILIINSAHRQV
VLEDNLDPVDTGNWLFFPGATVKHSCQSDGNSIYFHGNEGSEFNFXTTRDVDLSTEDIQE
QWSEEFESQPTGWDIVGAVIGTECGTIESGLSMVFLKDGERKICTPYLDTTGYGNLRFYF
VMGGICDPGDSHENDVALYAKTEGRKEHITLDTLSYSSYKVPSLVSVVINPDLQTPATKF
CLRQKNHQGYNRNVWAVDFFHVLPVLPSTMSHMIQFSINLGCGTQQPGNSISLEFSTNHG
RSWSLLHTECLPEICAGPHLPHSTIYSSENYSGWNRITIPLPNAALTRDTRIRWRQTGPI
LGNMWAIDNVYIGPSCLKFCSGRGQCTRHGCKCDPGFSGPACEMASQTFPMFISESFGSS
RLSSYHNFYSIRGAEVSFGCGVLASGKALVFNKDGRRQLITSFLDSSQSRFLQFTLRLGS
KSVLSTCKAPDQPGEGVLLHYSYDNGITWKLLEHYSYLNYHEPRIISVELPDDARQFGIQ
FRWWQPYHSSQGEDVWAIDEIIMTSVLFNSISLDFTNLVEVTQSLGFYLGNVQPYCGHDW
TLCFTGDSKLASSMRYVETQSMQIGASYMIQFSLVMGCGQKYTPHMDNQVKLEYSTNHGL
TWHLVQEECLPSMPSCQEFTSASIYHASEFTQWRRVIVLLPQKTWSSATRFRWSQSYYTA
QDEWALDSIYIGQQCPNMCSGHGSCDRGMCRCDQGYQGTECHPEAALPSTIMSDFENPSA
WESDWQEVIGGQIVKPEEGCGVISSGSSLYFSKAGKRQLVSWDLDTSWVDFVQFYIQIGG
ESSACNKPDSREEGVLLQYSNNGGIQWHLLAEMYFSDFSKPRFVYLELPAAAKTPCTRFR
WWQPVFSGEDYDQWAVDDIIILSEKQKQIIPVVNPTLPQNFYEKPAFDYPMNQMSVWLML
ANEGMVKNETFCSATPSAMVFGKSDGDRFAVTRDLTLKPGYVLQFKLNIGCANQFSSAAP
VLLQYSHDAGMSWFLVKEGCYPASAGKGCEGNSRELSEPTMYHTGDFEEWTRITIVIPRS
LASSKTRFRWIQESSSQKNVPPFALDGVYISEPCPSYCSGHGDCVSGVCFCDLGYTAAQG
TCVSIVPNHSEMFDRFEGKLSPLWYKITGGQVGTGCGTLNDGKSLYFSGPGKREARTVPL
DTRNIRLVQFYIQIGSKTSGITCIKPRARNEGLVVQYSNDNGILWHLLRELDFMSFLEPQ
IISIDLPRESKTPATAFRWWQPQHGKHSAQWALDDVLIGMNDSSQTGFQDKFDGSLDLQA
NWYRIQGGQVDIDCLSMDTALIFTENIGKPRYAETWDFHVSASTFLQFEMSMGCSKPFSD
SHSVQLQYSLNNGRDWHLVTEECVPPTIGCLHYTESSIYTSERFQNWKRITVYLPLSTIS
PRTRFRWIQANYTLGADSWAIDNVVLASGCPWMCSGRGICDAGRCVCDRGFGGAYCVPVI
PLPSILKDDFNGNLHPDLWPEVYGAERGNLNGETIKSGTSLIFKGEGLRMLISRDLDCTN
TMYVQFSLRFIAKSTPERSHSILLQFSINGGITWHLMDEFYFPQTTNILFINVPLPYTAQ
TNATRFRLWQPYNNGKKEEIWIVDDFIIDGNNLNNPVMLLDTFDFGPREDNWFFYPGGNI
GLYCPYSSKGAPEEDSAMVFVSNEVGEHSITTRDLNVNENTIIQFEINVGCSTDSSSADP
VRLEFSRDFGATWHLLLPLCYHSSGHVSSLCSTEHHPSSTYYAGTTQGWRREVVHFGKLH
LCG
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atggcccatgctccaacagaggccactgtgcacccacatctagctgaaattcatagtgac
agtattatcctacgagatgattttgactcctaccaccaaaaggaattgaatccaaacata
tgggtggaatgtaacaactgtgagactggagaacagtgtggtgcaattatgcatggcaat
gctgtcaccttctgtgagccatatggtccaagagaattgattaccacaggccttaataca
acaacagcttctgtcctccagttttccattggttcaggttcatgtcgctatagttactca
gacccttgtatcatcgtgtcatatgccaagaataatactgcggactggattcagcttgag
aaaattagagccccttccaatgtcagtactatyatccacatcctctaccttcctgaagac
gccaaaggggagaacgtccagtttcagtggaagcaggaaaayctacaagtaggtgaagtg
tatgaagcctgctgggccttagataacatcctcatcatcaactcagctcacagacaagtt
gttttagaagacaatctggatccagtagacacgggcaactggcttttcttcccaggagct
acagtgaagcatagctgtcagtcagatgggaactccatttatttccatggaaatgaaggc
agtgagttcaattttgycaccacccgggatgtagatctttctacygaggatattcaagag
cagtggtcagaagaatttgagagccagcctacagggtgggatatcgtgggagctgtmatt
ggtacagaatgtggaacaatagaatcaggtttatcaatggtcttcctcaaagatggagag
aggaaaatatgtaccccytacttggacactactggttacggraacctgaggttttacttt
gttatgggagggatttgtgatcctggagactctcatgaaaatgatgttgccctgtatgcg
aaaactgaaggaagaaaagaacacattacactggatactctttcctattcctcatacaag
gttccatctttggtttctgtagtcatcaatcctgatcttcagactcctgctaccaaattt
tgtctcaggcaaaagaaccatcaaggatataataggaatgtctgggctgtagattttttc
cacgtcttacctgttctcccttctacaatgtctcacatgatacagttttctattaatctg
ggatgtggaacacagcagcctgggaacagtatcagcttagagttttctaccaaccatggg
cgttcctggtcgctactccacactgaatgtttgcctgagatctgtgccggaccccacctc
cctcacagcacgatctactcctctgaaaactacagtgggtggaaccgaataacaattccc
cttcctaatgcagcactaacccgggacaccagaattcgctggagacaaacgggaccaatc
cttggaaatatgtgggcaattgataatgtttatattggtccatcatgtctcaaattctgt
tctggcagaggacagtgcactcgacatggttgcaaatgtgaccctggattttctgggcca
gcttgtgagatggcatcccagacattcccaatgtttatttctgaaagctttggcagttcc
aggctctcktcttaccataatttttactctatccgtggtgctgaagtcagctttggctgt
ggtgtcttggccagtggtaaggccctggttttcaacaaagatgggaggcgtcagttaatc
acatctttccttgacagctcacaatccaggtttctccagttcacattgaggctgggaagc
aagtctgttctgagcacgtgcaaagcccctgaccaacctggtgaaggtgttttattacat
tattcttatgataatgggataacttggaaactcttggagcattattcatatctcaactat
catgagcccagaataatctccgtagaattaccagatgatgcaagacagtttggaattcag
ttcagatggtggcaaccataccattcttcccagggagaggatgtatgggctattgatgag
attatcatgacatctgtacttttcaacagcattagtcttgactttaccaatcttgtggaa
gtcactcagtctctgggattctaccttggaaatgttcagccatactgtggccatgactgg
accctttgttttacaggagattctaaacttgcctccagtatgcgctatgtggaaacacaa
tcaatgcagataggagcatcttacatgattcagttcagtttggtgatgggctgtggccag
aaatataccccacacatggacaatcaggtgaaactagagtattcaaccaaccatggcctc
acctggcacctcgtccaagaggaatgccttccaagtatgccgagttgccaggaatttaca
tcagcaagtatttaccatgccagtgagttcacacagtggagaagagtcatagtgcttctt
ccccagaaaacttggtccagtgccacccgcttccgttggagtcagagctattacacagct
caagacgagtgggctctagacagcatttacattgggcagcagtgccccaacatgtgcagt
gggcatggctcctgcgaccgcggcatgtgcaggtgtgaccagggataccagggcactgag
tgccacccagaagctgcccttccttccacgatcatgtcagactttgagaacccgagtgct
tgggagtctgactggcaagaagttattgggggacaaattgtaaaacccgaagaagggtgt
ggggtcatctcttctggatcatctctatatttcagtaaggctgggaaaagacagttggtg
agctgggatctggatacttcttgggtggactttgtccagttctacatccaaatcggtgga
gagagttctgcttgcaacaagcctgacagcagagaggagggtgtcctcctccagtacagc
aacaacgggggcatccagtggcacctgctggcagaaatgtacttctcagacttcagcaaa
cccagatttgtctatcttgagctaccagctgctgccaagaccccctgcaccaggttccgc
tggtggcagcctgtgttttcaggggaagactatgaccagtgggcagttgacgacatcatc
attctgtctgagaaacaaaaacagatcatcccagttgtcaatccaactttacctcagaac
ttttatgagaaaccagcttttgattaccctatgaatcaaatgagtgtgtggttgatgtta
gctaatgaaggaatggttaaaaatgaaactttctgctctgccacgccatcagccatggtg
tttggaaaatcagatggggaccgatttgcagtaactcgagatttgactctgaagcctgga
tatgtgctgcaattcaagcttaacattgggtgtgccaatcaattcagcagtgctgcccca
gttctccttcagtactctcatgatgctggaatgtcctggtttctggtgaaagaaggctgt
tacccagcttctgcaggcaagggatgtgaaggaaactccagagaactgagtgaacccacc
atgtatcacacgggggactttgaagaatggacaagaatcaccattgttattccaaggtct
cttgcatccagtaagaccagattccgatggatccaggagagcagctcccagaagaatgtg
cctccttttgctttggatggcgtatacatatcagagccttgtcccagttactgcagtggc
catggggactgcgtttcaggggtgtgtttctgtgacctggggtacactgctgcacaagga
acctgtgtgtctattgtccctaatcacagtgagatgttcgatagatttgaggggaagctc
agcccgctgtggtacaagataaccggaggccaggttggaacaggctgtggaacacttaat
gatggcaagtctctctacttcagtggccctggaaaaagggaagcgaggactgtccctctg
gacaccaggaatatcagactcgttcagttttatatacaaattggaagcaaaacttcaggg
attacctgcatcaaaccaagagctagaaatgaagggcttgttgttcagtattcaaatgac
aatgggatactctggcatttgcttcgagagttggacttcatgtcatttctggaaccacag
atcatttccatcgaccttccacgagagtcaaagacacctgctacagcttttcggtggtgg
cagccccaacatgggaagcattcagcccagtgggccttggatgatgtccttataggaatg
aatgacagctctcaaactgggtttcaggataaatttgatggctctttagatctgcaagcc
aactggtatcgaatccaaggaggtcaagttgatattgactgtctctctatggacactgct
ctgatattcactgaaaacataggaaaacctcgttacgctgagacctgggacttccatgtg
tcagcatcaactttcttgcagtttgaaatgagcatgggctgtagcaagcccttcagcgac
tcccacagtgtacagctccagtattctctgaacaatggcagggactggcatcttgtcact
gaagaatgtgttcctccaaccattggctgtctgcactacacagaaagttcaatttacacc
tccgagagattccagaattggaagcggatcactgtctaccttccactctccaccatatct
cccaggacccggttcagatggatccaggccaactacactctgggagctgactcctgggct
attgataatgtcgtgctggcttcagggtgtccttggatgtgctcaggacgagggatttgt
gatgctggacgctgtgtgtgtgaccggggctttggtggagcctactgtgttcctgtcatt
cctctaccctcgattcttaaagatgatttcaatgggaacttacatcccgacctttggcct
gaagtgtatggtgcagagagggggaatctgaatggtgaaactatcaagtctggaacatca
ctcatttttaaaggggaaggactacggatgctcatttcaagagatctagactgtaccaat
acgatgtatgtccagttctcacttcgatttatagcaaaaagtaccccagagaggtcccat
tctattctattgcaattctccatcaatgggggaatcacctggcatctgatggatgaattt
tacttccctcaaactaccaacatacttttcattaatgttcccttgccatacactgcccaa
accaacgctacaagattcagactctggcaaccttataataacggtaagaaagaagaaatc
tggattgttgatgacttcatcatagatggaaataatttaaataaccccgtgatgcttctg
gatacttttgactttgggcccagagaagacaattggtttttctatcctggtggtaatatt
ggtctctattgcccatattcttccaaaggagcacctgaggaagattcagctatggtgttt
gtttccaatgaagttggtgagcattccattactactcgtgacctgaatgtgaatgagaac
accatcatacaatttgagatcaatgtcggatgctcaactgatagctcctctgctgatccg
gtcagactggaattttccagggacttcggggcaacctggcacctgctgctccccctctgc
taccacagcagcggccatgtcagctccttgtgctccactgagcaccacccgagcagcacc
tattatgcagggaccacccagggctggaggagggaggtcgtgcacttcgggaagctgcac
ctttgtgggtaa
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