Bos indicus (zebu cattle): 109558208
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Entry
109558208 CDS
T04792
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109558208 (VPS50)
Membrane trafficking [BR:
biu04131
]
Protein recycling
Others
EARP complex
109558208 (VPS50)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
MJ1674_2nd
Motif
Other DBs
NCBI-GeneID:
109558208
NCBI-ProteinID:
XP_019815243
UniProt:
A0A6P5BA88
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Position
4
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AA seq
964 aa
AA seq
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MQKIKSLMTRQGLKSPPESFSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDVNHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEG
SNMMGAEETSFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQSSATSSKTVTLFEQYCSGGNPFEIQADHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDFVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADSAATLTAAEERKEKVPSPHLSHLVVLTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDTLLKEFEQFNMRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLSAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctcttatgacccggcagggtctgaaaagtcctccagagagcttc
agtgatcttggtgccattgagagtctccgggtccctggaaaggaggaattccgagaactt
cgagaacagcctagtgaccctcaagctgaacaagaactaattaatagtattgaacaagtg
tatttttctacagattcatttgatattgttaaatatgaactggagaagctccctcctgtt
ctcaatttgcaagaattagaggagtacagagacaaattgaaacaacagcaagctgcagtc
tcaaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtcaaggaacttgaa
agagttacctcattacaaacaggtcttcagttagctgctgtaatctgcaccaatgggagg
agacacttgaatattgcaaaggaaggttttactcaagctagtttaggcctccttgcaaat
cagaggaaacgtcagttgctgattggacttctgaaatctctgagaacgataaaaacattg
caaagaacagatgtccgcctaagtgaaatgctggaggaggaagactatccaggagctatt
cagctgtgcctggaatgtcagaaagctgccagcacttttaaacattacagttgcataagt
gaactgaattcaaagttgcaagatactttagaacaaattgaggaacagttggatgttgct
ctgtccaaaatatgcaagaattttgacgttaaccactacaccaaagttcaacaagcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcatatgcacttcacccaagcc
attcataacaccgtgtttcaagttgttcttggctatgtggaactatgtgcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacgcatgttacaccagacagc
tatatyccatgccttgctgacctgtgcaaagccctgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaagcatgataatgaggatactacttctgcttctgaaggg
agtaatatgatgggtgctgaagagacaagttttgatcgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctaaaagttaaaacctacttgctt
ggaactgatttgtctatattcaaatatgatgatttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaagaatct
attagaaaacaaagtgtcaattattttaagaactaccatagaacaaggcttgatgaactg
agaatgtttctagagaatgagacctgggagctttgtcctgtgaagtcaaatttcagcatc
ttgcaacttcatgaatttaaattcatggaacagtctcgttccccatcggtttcacccagt
aagcagtcatctgcaacttcctcaaaaacggtaaccttgtttgagcagtactgcagtggt
gggaatccatttgaaattcaggcggaccacaaagatgaagaaacagaagatgtcctagct
tctaatgggtatgaatctgatgaacaggaaaaaagtgcctatcaggaatatgacagtgac
agtgatgttcctgaggaactgaaacgagatttcgttgatgagcagacaggcgatgctcct
gtgaaaagtgtttctcgagagaccctaaaaagcaggaagaaatcagattacagtctaaat
aaagtgaatgcacccatcttaacaaatacaacattgaatgtaataaggcttgttggtaaa
tatatgcagatgatgaacattcttaagccaattgctttcgatgttatccatttcatgtct
cagctctttgattattacttgtatgcaatatataccttttttggtcggaatgattcattg
gaatcaacaggactaggtcttagtagtagtagactaagaacaactctaaacaggatacaa
gaaagcctcattgatctggaggtttcggctgattcggctgccacgctcacagcagcagaa
gagaggaaggagaaggtgccgagtcctcatctgagtcacctagtggttttgacctctggg
gacacactgtatgggttggcggaaagagtggtcgccacagaatccttggtattcttggct
gaacagtttgagttccttcagcctcatctggatgctgtaatgcctgcagtcaaaaaaccc
tttcttcagcagttttattctcagacggtctcaacggccagtgaactacgcaaaccaatt
tactggattgtagctggtaaagccattgattatgaacagatgctgctgctgatggctaat
gtgaaatgggatgtaaaagaaattatgtcacagcacaacatatatgtagatacgctgtta
aaggaatttgagcagtttaacatgcggttgaatgaagtttctaagagagttcggataccc
ttgcctgtgtctaatatactttgggaacattgtatacgcctcgctaatagaactattgtg
gaaggatacgccaacgtcaagaagtgtagtaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaaacttgaaaagctaactgatatcagacccattccggataaa
gaatttgtggaaacctatattaaagcgtactacctaactgagaatgacatggaacgctgg
atcaaagagcacagggagtattcaacaaagcagctgaccaacctggtaaatgtttgcctg
ggatcccatatcaataagaaagcaagacaaaaacttctctcagcgatagatgatatagac
agacccaaaagataa
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