Bos indicus (zebu cattle): 109558856
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Entry
109558856 CDS
T04792
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04110
Cell cycle
biu04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109558856 (SMC1B)
04114 Oocyte meiosis
109558856 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109558856 (SMC1B)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
109558856 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
109558856 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
Ca_chan_IQ
Motif
Other DBs
NCBI-GeneID:
109558856
NCBI-ProteinID:
XP_019815728
UniProt:
A0A6P5BBV8
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All DBs
Position
5:complement(122340296..122431146)
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AA seq
1235 aa
AA seq
DB search
MSRLEVLFVENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKIANLRVKN
IQELIHGAHIGKPVSSSASVKIVYLEESGEEKTFARTIRGGCSEYSFNDNPMSRSAYITE
LEKIGIIVKARNCLVFQGTVESISMKKPKERTQFFEEISTSGELIGEYEEKKRKLHKAEE
DAQFNFNKKKNVAAERKHAKLEKEEADRYQNLLEELKINKIQLQLFRLYHNEKKINFLYT
ELERVNKNLSVTRESLSHHENIVKAKKKEHGMLSRQLQQTQKELKSLEALLNQKRPQYIK
AKENTSHHLKKLDMAKKSIKDSEKQCSKQEDDIKALETELADLDGAWRSFEKQIEEEMLH
KGRDIELEAGQLVQYKELKEQVRKKVAIMTQQLEKLQWEQRSDEERWAFEKRRHGEVQEN
IKQIKEQIEDHKKRIEKLEEYTKTCTNCLKEKKEQEENLVNEIEKTKSRMSEVNEELNLI
RSELQNAGIDTHEGKRQQKRAEILEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVASEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMMIDVIKT
QFPQLKKVIQFVCGNGLVCETLEEARHIAFAGPERRKTVALDGTLFLKSGVISGGSSDLK
SKARCWDEKEVKNLRDRRTQLIQELKDLMKIVRKEADLKQIQALIQGTTTRLKYAQSELE
IIKKKHLAAFYREQSQLQSELLNIESQCAMLSEGIKERQQRIKEFQRKIDKVEDDIFQHF
CEEIGVENIREFENKHIKQQQEADQKRLEFEKQKTRLNIQLEYSRNHLKKKLNKINTLKE
AIEKGREDTDHLKKVEENCLKIVDELMEKQQQLKDEFVTQNTNVEEVQAQIEEERKKFLA
IDREVGKWQKEVVILQSSLEQNRLEKHNMLLDCKVQDIEIVLLLGSLDDIIEVELGTEAE
GTQATTDIYEKEAAIEVDYSSLREDLKALQSDKEIEAQLRLLLQQVASQEDILLKTAAPN
LRAVENLKTVRDKFQESIDAFEASRKEARICRQEFEQVKKRRYDLFNQCFEHISISIDQI
YKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQEQFQMIIISLKEEFYSKADALIGIY
PEYDDCMFSRVLTLDLSQYPDTEGRESSRRQRKPH
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtttggaagtgctgtttgtggagaactttaagtcgtggcggggccgccaggtc
ataggccccttcaagaggttcacctgcatcatcggccccaacggctccgggaaatctaat
gtaatggatgcacttagttttgtaatgggagaaaaaatagctaatttaagagtgaaaaat
attcaagaactcattcatggagcacacattggaaaacctgtttcttcttctgcaagtgtg
aaaattgtatatttggaagaaagtggagaagagaagacatttgcaaggactatccgagga
ggatgctcagaatatagttttaatgataatcctatgagtcgttctgcttatatcacagag
ctggaaaagataggcataatagtcaaagcacggaactgtttagtttttcagggaactgtg
gagtcaatttcaatgaaaaaacccaaagaaagaacccagttttttgaggaaatcagcact
tcaggagagcttataggagaatacgaggaaaagaaaagaaagttacacaaagccgaagaa
gatgcacaatttaattttaataagaaaaaaaatgtagctgcagagcgcaaacatgcaaaa
ttagagaaagaagaggcagaccgttaccagaatctccttgaagaactgaaaattaacaag
atacaactgcagcttttccgactgtatcacaatgagaaaaaaattaattttttatacact
gagttagagcgtgtgaataagaatttgagtgtcacaagagagtctctttctcatcatgaa
aacatagttaaagccaagaaaaaggaacatggaatgttgagcagacaactacaacaaaca
caaaaagaattaaaatctcttgaagcactgttaaatcagaagaggcctcaatacattaaa
gctaaagaaaacacttctcaccacctcaagaaattagatatggctaaaaaatcaataaag
gacagtgaaaaacaatgttctaaacaggaagatgacataaaagccttggagacagagctg
gctgatttagatggtgcatggagaagttttgaaaagcagattgaggaagaaatgttacat
aaaggacgagacattgaactagaagctggtcagctggttcaatataaagaacttaaggaa
caggtaagaaagaaagtggctataatgacccaacagttggaaaagctgcagtgggaacag
aggtctgatgaagaaagatgggcatttgaaaagaggagacatggagaagttcaggaaaat
ataaaacaaataaaggaacaaatagaagatcataaaaagcgaatagagaagttggaggag
tatacaaaaacatgcacgaattgcttgaaagaaaaaaaagagcaagaggaaaacttagtg
aatgaaatagaaaaaacaaaatcaagaatgtctgaagttaatgaagagttgaatcttatt
agaagtgaattgcagaatgctggaattgatacccatgaaggaaaacgtcagcaaaagaga
gcagagattctagaacaccttaagagactttacccagattcagtgtttggaagactactt
gacctgtgtcatcctattcataagaaataccagctggctgttactaaactttttggtcgg
tacatggttgccattgttgtagcctctgaaaaggtagcaaaagattgtattcgatttctg
aaggaggaaagagctgaacctgagacgttccttgcactagattaccttgatatcaaacca
atcaatgaaagattaagggagattaaaggctgtaaaatgatgattgatgtcataaagact
cagtttcctcagctgaagaaagtaattcagtttgtgtgtggaaatggccttgtctgtgag
actctggaagaagcaaggcatattgccttcgctggacctgaaagacggaaaacagtagct
cttgatggaacattatttttaaaatctggagtgatctctggagggtcaagtgacttaaaa
tccaaggctagatgctgggatgagaaagaggtaaagaatttaagagacaggagaacccaa
ctaatccaagaattaaaggatttaatgaagatagtgcgcaaggaagcagatttgaaacaa
atacaggctctaatacaaggaactactacacgactcaaatatgcacaaagtgaactagaa
atcattaaaaagaagcaccttgctgctttttaccgggaacaatctcagctacaaagtgaa
ctactaaatattgaatctcaatgtgccatgttgagtgaaggaatcaaagaacgacaacaa
agaattaaagaatttcaacgaaagatagataaggttgaagatgatatttttcaacacttc
tgtgaagaaatcggtgtagaaaatattcgtgaatttgagaacaagcatattaaacagcaa
caggaagctgatcaaaaaagattagaatttgagaaacaaaaaactcggcttaatattcaa
cttgaatatagtcgtaatcatctgaagaagaaactgaataagattaacacattaaaagaa
gccatcgagaaaggtagagaagacactgatcacctaaagaaggttgaagaaaattgtctg
aaaattgtggatgaactcatggaaaaacagcagcaacttaaggatgaatttgtcactcag
aataccaacgttgaggaagtccaagctcaaattgaagaggaacgaaagaagtttttggcc
attgatagggaagtgggaaaatggcaaaaagaagttgtgatccttcagagttctctggaa
cagaatcggttagagaagcataacatgttgcttgactgcaaagttcaagacattgaaata
gttcttttgttggggtctctggatgacatcattgaagtggagttgggaactgaagcagaa
ggtacccaggcaacaactgatatatatgaaaaagaagcagctattgaggtggactacagc
tctctaagagaggatttgaaggctctacaatctgataaagaaattgaggcccagcttaga
ctcctcctacaacaagtagcatcccaagaagatatcctgttgaagacagcagccccaaac
ctaagagccgtggagaacctgaagactgtcagagacaagtttcaggagtccatagacgct
tttgaggccagcagaaaggaagccagaatatgtaggcaagagtttgaacaggtgaaaaaa
aggagatacgatcttttcaaccagtgttttgagcacatctcaatctcaattgatcaaatc
tacaagaagctctgcagaaacaacagtgcccaagcatttcttagcccagagaacccagaa
gagccttacttggagggaattagctataactgtgtggccccaggcaaacggttcatgccg
atggataacttgtccgggggagagaagtgcgtggcagccctggcactcctgtttgctgtg
cacagttttcggcctgctccattctttgttttagatgaagtagatgcagccctggacaat
actaacattggcaaagtgtcaagttatattaaagagcagactcaggaacagtttcagatg
ataataatttccctgaaagaggagttctattccaaagctgatgcactgataggcatctat
ccagagtacgacgactgcatgttcagccgagttttgaccctagatctttctcagtatcca
gatactgaaggcagagaaagcagcaggagacagcgcaagccccactaa
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