Bos indicus (zebu cattle): 109558986
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Entry
109558986 CDS
T04792
Symbol
PLXNC1
Name
(RefSeq) plexin-C1
KO
K06572
plexin C
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
109558986 (PLXNC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
biu04090
]
109558986 (PLXNC1)
CD molecules [BR:
biu04090
]
Proteins
109558986 (PLXNC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
PSI
Sema
Motif
Other DBs
NCBI-GeneID:
109558986
NCBI-ProteinID:
XP_019815916
UniProt:
A0A6P5BF83
LinkDB
All DBs
Position
5:26721249..26874300
Genome browser
AA seq
1575 aa
AA seq
DB search
MEVSRRKVPPRPPRPAALLPLLAYLLALAAPGQGADEPVWRSEQAIGAIAVSREDGVFVA
SGSCLDQLDYSLEHRLSRLYRDQAGNCSEPVPLTPPAXXXXXXXFSKLLLPYREGAAGLE
GLLLTGWTFDRGACEVRPLGNLSRSSLRNGTEVVSCHPQGSTAGVVYYANDTQSWYLAVA
ATYVLPESETASRCNPAASDRETAIALKDTGKRSLATKETGRLKLRDGGGSLHFVDAFLW
NGSVYFPYYPYNYSTGAATGWPSMARIAKSSEMLLFQGQAALNCGHGRPDGRRLLLSSSL
VEALDVWAGVFSAATGEDQEKRSPTTTALCLFRMSEIQARTKICRWDFEIDNNENNCKNE
DEPEKVEPIASSTLIHSDLTSVYGTVVMNRTVLFLGTGDGQLLKVILSENLASNCPEVIY
EIKEETPVFYKLVPHPKKNIYIYLTAGKEVRRIRVANCGKHKSCWECLAATDPHCGWCHS
LQRCTFKEDCEHLNNSENWLDVLSGAKKCPQIHLFRSSKDKTTVTVVGSFSPRHSECVVK
NVDTGRMLCKGKSVHNETCACIIPTRTAYKDVLVVNMTFSFGSWRVSKRFNFTNCSSLRE
CPGCIRTGCAWCKSERKCIHPFTACDPLDYKRNQDLCPVAFQKWTPPKTAGEGRFKENMS
NRTTWGLQVFSVTSIEPQKISTLGKSNVTVTGANFTEASNITMILKGTSTCDKDVIQVSH
VVNATHMQFSLPSSRKEMKDVCIQFDGGNCASVGPLSYVALPHCSLIYPATTWISGGQNI
TIMGRNFDVIDNLIFSQEVKEKNVSEYCMANXCRFLAPSLKSSKGPINVTVKLRVQETAL
DCGSLQYLDDPRFTGYRAESEVDTELEVKIQKENDNFNISKEDIEITLFYGKNKSLNCSF
ENITRNQDLTTIFCKIKHITAANSIATSSKKVDVKLGNLKLSVERESVLSPWYFLIGLPI
LLVFVIFVAVGVTRHKSKELSRKQSQQLELLESELRKEIRDGFAELQMDKLDVVDSFGTV
PFLDYKHFALRTFFPESGGFTHIFTEDMHNRDASDKNESLTALDALICNKSFLVTVIHTL
EKQKNFSVKDRCLFASFLTIALQTKLVYLTSILEVLTRDLMEQCSNMQPKLMLRRTESVV
EKLLTNWMSVCLSGFLRETVGEPFYLLVTTLNQKINKGPVDVITCKALYTLNEDWLLWQV
PEFSTVALTVTFEKIPENESADVCRNISVNVLDCDTIGQAKEKIFQAFLSKNGSPYGLQL
NEIGLELQVGTRHKELLDIDSSSVILEDGITKLNTIGHYEISNGSTIKVFKKIANFTSDV
EYTEDHCHLILPDSEAFQDVQGKRHRGKHKFKVKEMYLTKLLSTKVAIHSVLEKLFRSIW
SLPNSRAPFAIKYFFDFLDAQAENKKITDPDVVHIWKTNSLPLRFWVNILKNPQFVFDIK
KTPHIDGCLSVIAQAFMDAFSLTEQQLGKEAPTNKLLYAKDIPTYKEEVKSYYKAIRDLP
PLSSSEMEEFLTQESKKHENEFNEEVALTEIYKYIIKYFDEILNKLERERGLEEAQKQLL
HVKVLFEEKKKCKWM
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggaggtctcccggaggaaggtaccgccgcgccccccgcgccccgccgcgctgctgccg
ctgcttgcctatctgctggcgctcgcggcgcccggccagggcgcggacgagcccgtgtgg
cggtcggagcaagctatcggagccatcgcggtgagccgggaggacggcgtgttcgtggcg
agcggcagctgcctagaccagctggactacagcctggagcacaggctctcgcgcctatac
cgggaccaagcgggcaactgctcggaacccgtcccgctgacgccccccgcgcnnnnnnnn
nnnnnnnnnngcttcagcaagctgctgctgccctaccgcgagggggcggccggcctcgag
gggctgctgctcaccggctggaccttcgaccggggcgcctgcgaggtgcgacccctgggc
aatctgagccgcagctccctgcgcaacggcaccgaggtggtgtcgtgtcacccgcagggc
tcgacggccggcgtggtgtactacgcgaacgacacccagagctggtacctggcagtggcc
gccacctatgtgctgcccgagtccgagacggcgagccgctgcaaccctgcggcgtccgac
cgcgaaacggccatcgcgctcaaggacacggggaagcgcagcctggccacgaaggagacg
ggacgcctcaagctgcgcgacggcgggggtagcctgcactttgtggacgcctttctctgg
aacggcagcgtctacttcccctactacccctacaactactcgacaggcgccgccaccggc
tggcccagcatggcgcgcatcgccaagagctccgagatgctcctgttccagggccaggcg
gccctcaactgcggccacggccgcccagacggccgccgcctgctgctctcttccagcttg
gtggaggccctggacgtctgggcgggcgtgttcagcgcagccaccggagaggaccaggag
aagcgctcgcccaccaccaccgcactctgcctcttcaggatgagtgagatccaggcacgc
accaagatctgccgctgggacttcgagatcgataataacgagaacaactgcaaaaacgag
gatgaacctgaaaaagtcgaaccgatcgcatcatctaccttgatccattccgacctgaca
tccgtttatggcaccgtggtaatgaacaggactgttttattcttggggactggagatggc
cagttacttaaggttattctcagtgaaaatttggcctcgaattgtccagaggttatctat
gaaatcaaagaagaaacacctgttttctacaaacttgttcctcatcctaagaagaatatc
tacatctacctaacagctggaaaagaggtgaggagaattcgtgttgcgaactgcggtaaa
cataaatcctgttgggagtgtttagcagcaacagaccctcactgcggttggtgccattcg
ctacaaaggtgtacttttaaagaagattgtgagcatttaaataattcagaaaactggctg
gatgttttatctggagctaaaaagtgccctcaaattcacctatttcgaagcagtaaagat
aagacgacagtgacggtggtgggaagcttctctccgaggcactccgagtgcgtggtgaag
aacgtggacacaggcaggatgctctgcaagggtaaaagtgtgcacaatgagacctgcgcc
tgcatcatcccaaccaggacagcttacaaagatgttttagttgtcaacatgacgttctca
ttcggttcctggcgtgtgtcaaagagattcaactttaccaactgctcatcattaagagaa
tgtccaggatgtatccgaactggctgtgcctggtgtaaaagtgagagaaaatgcatccac
cccttcacagcttgtgaccctttggattacaagaggaaccaggacctctgtccagtggct
tttcaaaaatggacaccacccaaaacagcaggagaaggaagattcaaggagaatatgagt
aacagaaccacttggggcttgcaggtcttctctgttacgtccattgagccacagaaaata
tcgaccttagggaaaagtaatgtgaccgtcacgggagcaaactttaccgaggcatcgaac
atcacaatgatcctgaaaggaaccagtacttgtgataaggatgtgatacaggttagccac
gtggtaaatgccacccatatgcaattctctcttccgtcgagccgaaaagaaatgaaggat
gtgtgtatccagttcgatggtgggaactgtgcttcggtgggacccttgtcttacgttgct
ctgccccactgctccctcatatatcctgctaccacctggatcagtggtggtcaaaatata
accatcatgggccgaaattttgatgtaattgacaacttaatcttttctcaggaggtaaaa
gaaaaaaatgtctctgaatattgtatggcaaattmctgcagatttttagcccccagttta
aagagttcgaaaggacctataaatgtcactgtgaagctcagagtccaggagaccgccttg
gattgtggaagcttgcagtacctcgatgaccccagattcacagggtatcgagctgaatct
gaggtggacacagaattggaagtaaaaattcaaaaagaaaatgataacttcaacatttcc
aaggaagacattgaaatcactctcttctatggaaaaaataagtcattaaattgcagcttt
gaaaatattactagaaatcaagatcttaccaccatcttttgcaaaattaaacacatcact
gctgcaaacagcatcgccacctcttccaagaaagttgacgtcaaactgggaaacctgaag
ctctctgtcgaacgggaatcagttctttccccctggtattttctgattgggcttcccatc
ttgctagtgtttgtcatttttgtggccgtgggggtgaccaggcacaaatcgaaggagctg
agccgcaaacagagccaacaattggagctcctcgagagcgagctccggaaagagatacgt
gatggctttgctgagctgcagatggataaattggatgtggttgatagttttggaactgtt
cccttccttgactacaaacattttgctctgagaactttcttccccgagtcaggtggcttc
acccacatcttcactgaagatatgcataacagagatgccagcgacaagaatgaaagtctc
acagctttggatgccctaatttgtaataaaagtttccttgttactgttatccacactctt
gaaaagcagaagaacttttcagtgaaggacaggtgtctgtttgcttccttcttaaccatt
gccctgcaaaccaagctggtctacctaaccagcatcctggaggtgctgaccagggacttg
atggagcagtgcagtaacatgcagcctaaactcatgctaagacgcacagagtccgtggta
gagaaactcctcacaaactggatgtctgtctgcctttctggtttcctgcgggagactgtt
ggggagccattctatttgctggtgacaactctgaaccagaaaataaacaagggccccgtc
gatgtaatcacttgcaaagcgctgtacacccttaatgaggactggctgctrtggcaggtt
ccagaattcagtactgtggcattaactgtcacctttgaaaaaatcccagaaaatgagagt
gcagatgtctgtcggaacatatcagttaatgttcttgattgcgataccataggtcaagcc
aaagaaaagattttccaagcattcctaagcaaaaatggctctccttatggacttcagctg
aatgaaataggacttgagcttcaagtgggcacacgacacaaagaacttctggatattgac
agctcctctgtgattcttgaagacggaatcaccaagctcaataccattggccactatgag
atatcaaatggatccactataaaagtctttaagaagatagcaaattttacttcagatgtg
gaatacacagaagatcactgccacttgattttaccagattcggaagcattccaagatgtg
cagggaaagagacatcgagggaagcacaagttcaaagtaaaagaaatgtatctgacaaag
ctgctgtcgaccaaggtggcaattcactctgtacttgaaaaactttttagaagyatctgg
agtttacccaacagcagagccccgtttgctataaaatacttttttgactttttggatgcc
caggctgaaaacaaaaaaatcacagatcctgacgttgtacatatttggaaaacaaacagc
cttcctcttcgcttctgggtaaacatcctgaagaaccctcagtttgtctttgacattaag
aagacaccacacatagatggctgtctgtcagtgatcgctcaggcattcatggacgcgttt
tccctcacagagcagcaacttgggaaggaagcaccaactaataaacttctctatgccaag
gatatcccaacctacaaagaggaagtaaagtcttattacaaagcaatcagggatttgcct
ccattgtcatcttcagagatggaagaattcttaactcaggaatctaagaaacatgaaaat
gaatttaatgaagaagtggccttgacagaaatctacaaatacatcataaaatattttgat
gagattctaaataaactagaaagagaacgagggctggaagaagctcagaaacaactcttg
catgtaaaagtcttatttgaggaaaagaagaaatgcaagtggatgtaa
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integrated database retrieval system
