Bos indicus (zebu cattle): 109559023
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Entry
109559023 CDS
T04792
Symbol
CALCOCO1
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1 isoform X1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biu03021
]
109559023 (CALCOCO1)
04131 Membrane trafficking [BR:
biu04131
]
109559023 (CALCOCO1)
Transcription machinery [BR:
biu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
109559023 (CALCOCO1)
Membrane trafficking [BR:
biu04131
]
Autophagy
ER-phagy
ER-phagy recepters
109559023 (CALCOCO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
Zn-C2H2_12
CC4_CEP85
ACBP4_C
Fez1
DUF3450
DUF724
Motif
Other DBs
NCBI-GeneID:
109559023
NCBI-ProteinID:
XP_019815971
UniProt:
A0A6P5BFD1
LinkDB
All DBs
Position
5:29236241..29250450
Genome browser
AA seq
734 aa
AA seq
DB search
MEESSLSRAPSRGGVNFLNVARTYIPNTKVECHYTLPPGTVPSASDWIGIFKVEAACVRD
YHTFVWSLVPESVTDGSPIHASVQFQASYLPKPGAQLYQFRYVNRQGRVCGQSPPFQFRE
PRPMDELVTLEETDGGSDILLVVPKATVLQNQLDESQQERNDLMQLKLQLEGQVTELKSQ
VQELEKALAAARQEHAELAEQYKGLSRSHGELTEERDILSRQQGDHVARILELEEDIQTI
SEKVLMKEVELDRVRDTVKALTREQEKLLGQLKEVQADKEQSEAELQMAQQENRRLNLEL
QEAKDRQEEQSAQAQRLKDKVAQMKDTLGQVQQRVAELEPLKEQLRGAQELAASSQQKAA
LLGEELASAAGARDRTIAELHRSRLEVAGVNGRLAELSLHLKEEKSQWSKERAGLLQSVE
AEKDKILKLSAEILRLEKAVQEEKTQSQVFKTELAREKDSSLVQLSESKRELTELRSALR
VLQKEKEQLQEEKQELLEYMRKLEARLEKVADEKWSEDPATEDEEAAVGLSCPAALTDSE
DESPEDMRLPPYSLCESGDPGSSPATGPREASPLVVISQPAPIAPQLSGPAEDSSSDSEA
EDEKSVLMAAVQSGGEEANLLLPELGSAFYDMASTVLCRAQIALHPPSPAPTPSPATRCC
RSSLTPLGNPLGGGFSGFAVGPLTEASTGGPATPPWKECPICKERFPAESDKDAMEDHMD
GHFFFSTQDPFTFE
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtcatcactaagccgggcaccatcccggggtggagtcaactttctgaatgta
gcccggacctacattcccaacaccaaggtggaatgtcactacacactcccgccaggcacc
gtgcccagtgccagtgactggattggcatcttcaaggtggaggctgcctgtgtccgggat
taccacacatttgtgtggtctttggtgcctgaaagtgttactgatggttctcccatccac
gccagcgtccagttccaagccagctacctgcccaaacctggagcccagctctaccagttt
cgctatgtgaaccgccagggccgggtgtgtgggcagagcccccctttccagttccgagag
ccacggcccatggatgaactggtgaccctggaggagactgatggtggctctgacatcctg
ctggttgtccccaaggcaactgtgctgcagaaccagctggatgagagccagcaagagagg
aatgacctgatgcagctgaagctacagctggaggggcaggtgacagagctgaagagccaa
gtgcaggagcttgagaaggctctggcagcggccaggcaggagcatgcggagctggcagag
cagtataaggggctttcccggtcccacggggagctcacagaagagagggacatcctgagc
cgacaacagggagaccatgtggcccgcatcctggagctggaagaggacatccagaccatc
agtgagaaagtgctgatgaaggaggtggagctggacagggttagagacacggtgaaggcc
ttgactcgggaacaagagaagctccttgggcagctgaaggaagtgcaggcagacaaggag
caaagcgaggctgagctccagatggcacagcaggagaaccgccgcttgaatttggagctg
caggaggccaaggaccggcaggaggagcagagtgctcaggcccagcgactgaaggataag
gtggcccagatgaaggacaccctcggccaggtccagcagcgggtggctgagctggagccc
ctgaaggagcagcttcgaggggcccaggagcttgcagcctcaagccagcagaaagctgcc
cttcttggggaggagttggccagcgcagcgggagcccgggaccgcaccatagccgagctg
caccgcagccgtctggaggtggccggagtcaacggcaggctggctgagctcagtctgcac
ttgaaggaggaaaaaagccagtggagcaaggagcgggcagggctgctgcagagtgtggag
gcagagaaggacaagatcctgaagctgagtgcagagatacttcgattggaaaaggcagtg
caggaggagaagactcagagccaagttttcaagactgaactggcccgggaaaaggactct
agcctggtgcagctgtcagagagcaagcgggagctgacagagctgcgctcagcgctgcgt
gtgctccagaaggaaaaggagcaactacaggaggagaagcaggaactgctggagtacatg
agaaagctggaggcccgcctagagaaggtggctgatgagaagtggagtgaggaccctgcc
acagaggacgaggaggccgccgtggggctgagctgcccagcagctctgacagactcrgag
gacgagtctccagaagacatgaggcttccaccctacagcctgtgtgagagtggggacccg
ggctcctcccctgccacggggccgcgagaggcttctcccctcgtggtcatcagccagcca
gctcccattgctccccaactctcagggccagctgaggacagtagctcagactcggaggct
gaagatgagaagtcggtcctgatggcagctgtgcagagtgggggtgaggaggccaacctg
ctacttccagaactgggcagtgccttctatgacatggccagcaccgtcctctgcagagcc
caaattgccctgcatcccccctctcctgcccctacgccttccccagccaccagatgctgt
cgctcctctctgactcccctgggcaatcctttgggtggcggattcagtggctttgctgtg
ggtcccttgacagaggccagcactgggggccctgccaccccgccgtggaaggagtgtcct
atttgtaaggagcgcttcccagccgagagtgacaaggatgccatggaggaccacatggat
ggacacttctttttcagcacccaggaccctttcacctttgagtga
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