Bos indicus (zebu cattle): 109559119
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Entry
109559119 CDS
T04792
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03082
ATP-dependent chromatin remodeling
biu04714
Thermogenesis
biu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109559119 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
109559119 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
109559119 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biu03021
]
109559119 (SMARCD1)
03036 Chromosome and associated proteins [BR:
biu03036
]
109559119 (SMARCD1)
Transcription machinery [BR:
biu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109559119 (SMARCD1)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109559119 (SMARCD1)
PBAF complex
109559119 (SMARCD1)
GBAF(ncBAF) complex
109559119 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
109559119
NCBI-ProteinID:
XP_019816159
UniProt:
A0A6P5BSR5
LinkDB
All DBs
Position
5:complement(32809550..32827870)
Genome browser
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKVMTDVVGNSEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtctgtggctccgagcggcggcgccggagcctcagga
ggggcgggtgcggcggctgccctgggcccgggcgggacaccggggcctccggtgcgaatg
gggccggcgccgggtcaagggctataccgctccccgatgcctggagcggcctatccgaga
ccaggtatgctaccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatgggggtaacccttcagtccgacctggcctggcccagtcagggatggaccagtcccgc
aagagacctgcgcctcagcagatccagcaggtccagcagcaggcggtccaaaatcggaac
cacaatgcaaaaaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaggaggccttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggatggg
gaagggacggtggcttcctgggaacttcgggtagaaggacggctcctggaggattctgcc
ttgtccaaatatgatgccaccaaacaaaagaggaagttttcttctttttttaaatccttg
gtgatcgaactggacaaagacctgtatggaccagacaaccatctggtagaatggcacagg
accgccactacccaggagacggacggcttccaggtgaaacggccaggagacgtgaatgtg
cggtgcactgtcctgctgatgctggactaccagcctcctcagtttaaattagaccctcgt
ctggctcggctcctgggcatccacacccagacccgtccggtgatcattcaagcactgtgg
caatatattaagacacacaagctccaggacccacatgagcgggagtttgtcatttgtgac
aagtacctccagcagatctttgagtctcagcgtatgaagttctcagagattccccaacgg
ctccatgccttgcttatgccacctgagcccattatcataaatcatgtcatcagtgttgac
ccgaatgatcagaaaaagacagcttgttatgacattgatgtggaagtggatgataccttg
aagacccagatgaattcttttctgctgtctactgccagccagcaggagattgctactcta
gacaacaagatccatgagacaatagagactatcaatcagctgaagacccagcgggagttc
atgctgagctttgccagagaccctcagggtttcatcaatgactggcttcagtcgcagtgt
cgggacctcaaggtcatgactgatgtggtgggtaactcagaggaggagcgccgagcagag
ttctacttccagccttgggcccaggaggccgtgtgtcgatatttctactccaaggtgcag
cagagacgacaagaattagagcaagccctggggatccgaaatacatag
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