Bos indicus (zebu cattle): 109559226
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Entry
109559226 CDS
T04792
Symbol
CNOT2
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109559226 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109559226 (CNOT2)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109559226 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109559226 (CNOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
109559226
NCBI-ProteinID:
XP_019816367
UniProt:
A0A6P5BNM1
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Position
5:complement(46608489..46745194)
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AA seq
550 aa
AA seq
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MRTVRKGHDSMVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMF
PHRSEKDMLASPSTSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHV
TPTTGVPTMSLHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSS
PSIICMPKQQPSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDF
PALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKD
PTSSNDDSKSNLNTSGKTTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGM
VTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRP
QDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWR
YHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPST
FNYNPAQQAF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgtgaggaaaggacacgactctatggtgaggactgatggacatacattatct
gagaaaagaaactaccaggtgacaaacagcatgtttggtgcttcaagaaagaagtttgta
gagggggtcgacagtgactaccatgacgaaaacatgtactacagccagtcttctatgttt
ccacatcggtcagaaaaagatatgctggcatcaccatctacatcaggtcagctgtctcag
tttggggcaagtttatacgggcaacaaagtgcactaggccttccaatgagggggatgagc
aacaatacccctcagttaaatcgcagcttatcacaaggcactcagttaccgagccacgtc
acgccaacaacaggggtaccaacaatgtcacttcacacgcctccatctccaagcaggggt
attttgcctatgaatcctaggaatatgatgaaccactcccaggttggtcagggcattgga
attcctagcaggacaaatagcatgagcagttcagggttaggtagccccaacagaagctcg
ccgagcataatatgtatgccaaagcagcagccttctcgacaaccttttactgtgaacagt
atgtctggatttggaatgaacaggaatcaggcatttggaatgaataactccttatcaagt
aacatttttaatggaacagatggaagtgaaaatgtgacaggattggacctttcagatttt
ccagcattagcagaccgaaacagaagggaaggaagtggtaacccaactccattaataaac
cccttggctggaagagctccttatgttggaatggtaacaaaaccagcaaatgagcaatcc
caggacttctcaatacacaatgaagattttccagcattacctggttccagttataaagat
ccaacatcaagtaacgatgacagtaaatctaatttgaatacatctggcaagacaacttca
agtacagatggacccaaattccctggagataaaagttcaacgacacaaaataataaccag
cagaaaaaagggatccaggtgttacctgatggtcgggttactaacattccccaagggatg
gtgacggaccaatttggaatgattggcctgttaacatttatcagggcagcagagacagac
ccaggaatggtacatcttgcattaggaagtgacttaacaacattaggcctcaatctgaac
tctcccgaaaatctctaccccaaatttgcatcaccctgggcatcttcaccttgtcgacct
caagacatagacttccatgttccatctgagtacttaacgaacattcacattagggataag
ctggctgcaataaaacttggccgatacggagaagaccttcttttctatctctattacatg
aacggaggagacgtattacaacttttagctgcagtagagctttttaaccgtgattggaga
taccacaaagaagaacgagtatggattaccagggcaccaggcatggagccaacaatgaaa
accaatacatatgagaggggaacatattacttctttgactgtcttaactggaggaaagta
gctaaggagttccatctggaatatgacaaattagaagaacggcctcacctgccatccacc
ttcaactacaaccctgctcagcaagccttctaa
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