Bos indicus (zebu cattle): 109559436
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Entry
109559436 CDS
T04792
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
biu03009
]
109559436 (UTP20)
Ribosome biogenesis [BR:
biu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109559436 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
DUF7051
Motif
Other DBs
NCBI-GeneID:
109559436
NCBI-ProteinID:
XP_019816726
UniProt:
A0A6P5BU30
LinkDB
All DBs
Position
5:69983634..70069848
Genome browser
AA seq
2778 aa
AA seq
DB search
MKPKPVSHKTENTYRFLTFAERLGNVNIDIIHRIDRTASYDEEVETYFFEGLLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQIKNSYAYQPLLDLVVQLARDLQT
DFYPHFQDFFLTITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMSNIYSMYSTLLAH
KKLHIRNFAAESFTFLMRKVSDKNALFNLMFLDLDEHPEKVEGVGQLLFEMCKGVRNMFH
SCTEKAIKLILQKLGPVTETEAQLPWILVGETLKNMVKSTALYIYKEHFGIFFECLQESL
LDLHTKVTETNCGESSEQIKRLLETYLILVKHGNGSKITKPVDVCKVLSQTLQTAHLSTS
CRETLLGVVSALILGENVSLPETLIRETIEKVFESSFERHLILDFSEVMFXMKQFEQLFL
PSFLLYIENCFLTNDAAVRDEALAILAKLILNKAAPPTTGSMAIEKYPLLFSQQTVGSYI
RQKKTKSKEGKEQISVLEHLLSIIQSPPNQDTTYLSCSWAALVVLPHIRPLEKEKVIPLV
TYFIESLFMTVDRGSFGKGNLFVLCQAVNTLLGLEESSELLRLVPVERVKNLVLTFPLEP
SVLLLADLYYQRLSLCGCRGPLSEEALMELFPKLQANISTGISKIRLLTIRILNHFEVQL
PELMEDDGLSEHQSVFAILRQAELVPATVNDYREKLLHLRKLRHDVVQSVVPDGPLQEVP
LRYLLGMLYVNFSALWDPVIELISSYAHGMENKQFWKVYYEHLEKAATHAEKELQNDTRD
EEKSIGDANWEQTQEGNXGALYHKQLTLKTALQERLDHTNFRFLLWRALAKFPERVEPRS
RELSPLFLRFINNEYYPADLQVAPTQDLRRKGRGLAIEEVEEETAARDDDELEEELGPQE
EPAQKKKTRRAAAKQLIAHLQVFSKFSNPRALYLESKLYELYLQLLLHQDQMVQKITLDC
ILTYKHPHILPYRENLQRLLEDRNFKEEIVHFSISEDNTVVKAAHRAELFPILMRILYGR
MKNKTGSKTQGKSASGTRMSIVLRFLAGTQPEEIEIFLDLLFEPVKHFRNGECHTAVIQA
VEDLDLSKVLPLGRQHGILNSLEIVLKNISHLISXYLPKILQLLLCMTATVSHILDQREK
IQLRXINPLKNLRRLGIKMVTDIFLDWESYPFRTEEIDAVFHGVVWPQISRLGSESQYSP
TPLLKLISIWCRNARYFCFLAKQKPGHPECDILTNVFAILSAKNLSEATASLVMEIADDL
LSLPDFEPSEAVLSLPVTGCVYTESADESITTGGRLILPHVPAILQYLSKTTISAEKLKK
KKNRAQVSKELGILSKISKFVKEKEQSSLLITLLLPFLYXGSVAQDTEIDILVTVQNLLK
HCLEPTSFLKPLAKLFSVIKNKLSRQLLCTVFQTLSDFESGLTYITDVVKLNAFDQRHLD
DINFDVRFSAFQTITSYIKEMQTVDMNYLIPVMHNCFYNMELGDMSLSDNASMCLMSIIK
KLAALNVTEKEYREIIHRSLLEKLRKGLKSQTETIQQDYTTLLSCLIQTFPNQPEFEDLV
QLTDCHDPEMDFFENXKHIQIHRRARALKKLAKQLMEGKVVLSSKSLQNYIMPYAMAPVF
DEKMLKHENITIAATEVIGAVCKHLSWSAYVYYLKHFIHVLQAGQINQKLGVSLLVIVLE
AFHFDHKTLEEQMRKLQNEEDTTEVIELPEHEAMELEHMDEDEKEDECNKTLLDKNEEPE
NPDPADHEGTAAKESECITKSISFLPRNKEELERTIKNIQGTITGDILPRLHKCLASTTK
RDEEHKLIKSKVVNDEEVVRVPLAFAMVKLMQSLPREVMETNLPSILLKVCALLKNRAQE
IRDIARSTLAKIIEDLGVHYLQYILKELQTTLVRGYQVHVLTFTVYMLLQGLTNKLQVGS
LDSCLDIMIEIFNHELFGAVAEEKEVKQILSKVMEARRSKSYDSYEILGKFVGKDQVTKL
ILPLKEILQNTTSLKLARKVHETLRRIISGLLVNQEMTAESILLLSYGLVSENLPLLTQK
EKNPAAPAPDPRLPPQSCLLLPPTPVRGGQKAVVSKKTNMHIFIESGLRLLHLSLKTSKV
KSSSEHVLEMLDPFVSLLIDCLGSMDVKVITGALQCLIWILRFPLPSIETKAEQLTKHLF
ILLKDYAKLGAARGQNFHLVVNCFKCVTILVKKVKSYQITQKQLQVLLAYAEEDIYDTTR
QATAFGLLKAILSRKLLVPEMDDVMRKVSKLAISAQSEPARVQCRQVFLKYILDYPLGDK
LRPNLEFMLAQLTYEHETGRESALEMIAYLFDTFPQGLLHENCGMFFIPLCLMMVNDDSA
MCKKMASMAIKSLLSKISLEKKDWLFDMVTTWFGAKKHLNRQLAALICGFFAESEGVNFE
RRLGIVLPVIEKEIDPENFTDIMEETEEKAADRLLFSFLILISKLIKECNIIQFTKPSET
LSKIWSHVHSHLRYPHSWVWLTAAQIFGLLFASCQPEELIRKWHVKKTKKKVSESVAIRF
LTSDLEQKMKSISLASCHQLHSKFLDQSLGEQVVKNLLFVAKVLYLLEPDSGDIKEDTEE
QEVLGDGMAGEGVEEHKACADEKEEHSRPATLLWLIQKLSRIAKVEAAYSPRNPLKRTCI
FKFLGAIAMDLGIDKVKPYLPVIIAPLFRELNSTYSEQDPSLKNLSQEIIELLKKLVGLE
SFSLAFASVQKQATEKRALRKKRKALEFVTNPDIAAKKKLKKHKNKSEAKKRKIEFLRPG
YKAKRQKSHSLKDLAMVE
NT seq
8337 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaaagccggtttcccacaagaccgagaacacgtaccggtttcttacatttgct
gagcgactggggaatgtgaatatcgacattattcaccggattgatagaactgcaagctat
gaygaggaagttgaaacctacttttttgagggtctgctgaagtggagagaattgaacctg
acggaacactttgggaaattttacaaagaagttattgacaaatgccagtcattcaatcag
ctggtgtatcatcaaaatgagatagttcagagtttgaagactcacctgcaaatcaagaac
agttatgcctatcaaccccttttggatttggttgtacagttggcacgagatctgcagaca
gacttctatccccattttcaggatttttttctgaccatcacctcaatcctggagactcag
gacacggagttgttagaatgggctttcacctctctgtcatatctgtacaagtacctttgg
agactgatggtgaaagacatgtccaatatatacagcatgtatagtacacttctggctcat
aaaaagctacatataagaaattttgctgctgaaagctttacttttttgatgagaaaggtt
tctgataaaaatgcacttttcaatttaatgtttcttgatcttgatgaacatccagaaaaa
gtagaaggcgttggacagttgctctttgaaatgtgcaaaggagttagaaatatgtttcac
tcttgcacagagaaggcaataaaactaattttgcaaaagctcggaccagttacagaaaca
gaagctcaacttccatggattttagttggagaaacactcaaaaacatggtcaaatccact
gcactctatatctacaaggaacattttggaatattctttgaatgtttgcaagaatcactc
ctggatctacatacaaaagtaacggaaactaattgtggtgaaagttctgaacagattaaa
aggttgttagaaacatacctgatacttgtaaaacatggaaatggatcaaagataaccaaa
cctgttgatgtttgtaaagtcttgtctcaaacattacagacagcccatctctctacatct
tgccgggagacgctcttgggtgtagtttctgctttgatcctaggcgaaaatgtttccttg
ccagagaccctcatcagagaaaccatagaaaaagtttttgaaagcagctttgaaagacac
ttaattttggatttttcagaagtcatgtttrctatgaagcagtttgagcagcttttccta
cccagctttctcttgtatattgagaattgcttcctgacgaatgatgctgcagtcagagat
gaagctctggccattttggccaagctcattcttaacaaagcagcacctcctaccactggc
tccatggcgattgagaagtaccctctgcttttctcccagcagacagtaggatcctatata
aggcagaagaagacaaaatccaaggaaggaaaggaacagatctcagtgttggaacatctt
ttatctataattcagtcacccccgaatcaagatactacttacctttcatgttcttgggcg
gcccttgttgtgttacctcatattaggcccctggagaaagagaaggtgataccactagtc
acctacttcatcgagtcactcttcatgactgttgacagagggagctttggaaaaggaaac
ttatttgttctttgtcaagctgtaaatactctgctaggtttggaagaatcttctgaactt
cttcgtttggttcctgtggaacgggtgaagaacttagtattaacgtttcctttggagccg
tctgtgttgctgttggctgatctctattatcagagattatccttatgtggctgcaggggg
ccactttcggaagaggctttaatggaattatttcccaagttacaagcaaacatttcgact
ggtatatccaagattcgacttttgacaataaggatcctaaaccactttgaggttcagctt
ccggaattaatggaggatgatgggctctcagagcatcagtctgtcttcgctatactgcgc
caggcagaactcgtgccagccactgtgaacgattacagagagaagcttcttcatttgaga
aaactcaggcatgatgtagtgcagtctgtagtccctgatgggccattacaggaggtgcca
cttcgttatttattaggcatgttgtatgtaaacttcagtgctctctgggatcctgttatt
gaactcataagttcttatgcacatggaatggaaaataagcagttttggaaagtctactat
gagcatctagaaaaagcagctacacatgctgagaaagaattgcagaatgacacaagagat
gaggagaagtctattggagatgcaaattgggagcagactcaggaaggaaacrttggagct
ctttatcacaagcagttgacattgaaaactgcccttcaggaaagactggaccacaccaat
tttcgttttttgctctggcgagctctggcaaaattcccagaaagggtagagccacggtcc
agggagctttccccacttttcttgagatttatcaacaatgagtattacccagcagatctg
caggttgcgccaacccaggatctkcgaagaaaaggcagagggctggcaatagaggaagta
gaagaggaaactgccgccagagacgacgacgagctggaggaagagctggggccccaagag
gaacccgcacagaagaaaaagacaagaagagctgcggcaaagcagctaattgctcatttg
caagttttctctaagttttcaaatccacgagccttatatctggaatcgaaattatatgag
ctgtatcttcagttgttgctacatcaggatcagatggtacaaaaaataacactggattgc
atactgacatataaacatccacatattctcccttacagggaaaacctacaaagattgctt
gaagacagaaactttaaggaagagatagtgcattttagcatttctgaagataatacagtg
gtgaaagcagcccaccgagcagaactgtttcctattctgatgagaattttgtatggtcga
atgaagaataagactggaagtaaaactcaggggaaatctgcttctggtacccgcatgtcc
atcgtcctgaggttcctggctgggacgcagccagaagagatcgagatattcttagacctg
ctatttgagcctgtgaagcacttcaggaacggagaatgccatacygctgtcattcaagca
gtagaagatttagatttgtctaaagttcttcctttgggtcgtcagcacggcatattaaat
agccttgagatagtcttraagaacattagtcacctgatcagcrcatatttaccaaagatt
ctgcagctactgctctgcatgactgcaactgtgtcacacatccttgaccaacgagaaaag
atacagctaaggyttattaacccactgaaaaatttaagacgtcttggaatcaaaatggta
actgatatctttttggattgggagtcctatccattcagaacagaagaaattgatgcagta
tttcatggtgtagtttggccccagatcagcaggcttggatctgaaagtcagtattctcct
actcctctrctgaaactaattagtatctggtgcagaaatgcaagatatttctgtttcctg
gctaaacagaaacctgggcacccagaatgtgatatcctgaccaatgtttttgcgattctc
tcagcaaaaaacctctctgaagctacagctagtcttgtgatggaaatagccgacgacctt
cttagccttccagattttgaaccctcagaagcagttttgagcttgccggtgacaggatgt
gtatacacagaaagtgcagatgagtctatcacaacaggaggacgattaattctacctcat
gtacctgctattctccagtatctcagcaaaaccacaataagtgcagaaaagctaaaaaag
aagaagaatagagcacaagtcagtaaggaacttggcattctttcaaagatcagcaagttt
gtgaaagaaaaagaacaaagttctctgctcattacactgctcctgccattcctctacygt
ggcagtgttgctcaggatacagaaattgacattctggtgacagtacaaaacctgttgaaa
cattgtctggagcctacaagcttcctcaaacctctagcaaaactcttctcagttattaag
aacaagttgtcaagacagttactttgtacagttttccagaccctttctgattttgagagt
ggattaacatatattactgatgttgtcaagcttaacgcctttgatcaaagacatcttgat
gatatcaactttgatgttcgcttctcggcgttccagaccattacctcttacattaaagag
atgcaaactgtagacatgaactacctaatcccagttatgcataattgtttctataacatg
gagttaggagacatgtctttaagtgataatgcaagcatgtgcttgatgagtatcatcaaa
aagcttgctgctttgaatgtcacagagaaagaatatagagaaatcattcatcgttctctg
ctggagaaactgaggaaaggattgaagagccagacagagactattcaacaggattatacc
acactgctttcctgtttaattcaaacctttccaaatcaaccagaatttgaagacttggtt
cagcttactgattgccatgatccagaaatggacttctttgagaatatkaagcacattcag
atccacagaagagcaagagccttgaagaaactggcaaaacaactaatggaaggcaaagtc
gtgctgtcttctaaatctcttcagaattacatcatgccttatgctatggcaccagttttt
gatgagaaaatgctcaagcatgaaaatataaccattgctgccacagaagttattggagct
gtttgcaaacatctctcttggtcagcatacgtgtactacttgaaacatttcattcatgtc
ttacaggcgggacagatcaatcaaaagttgggtgtcagtttgctagtgatagtgttagaa
gcattccactttgaccacaaaactcttgaagaacaaatgagaaaacttcagaatgaagag
gataccacagaagtgattgagttgccagagcacgaagccatggaattagagcatatggat
gaggacgagaaggaggatgaatgtaataagactttgttggacaagaatgaagagccagaa
aaccctgacccagctgatcatgaagggacagcggctaaggaatctgagtgtatcacaaag
tccatctccttccttcctcggaataaagaagaattggagagaacaattaaaaatatccaa
ggaaccataactggggacatcctgcccaggctccataaatgcctggcatctacgactaaa
agagacgaagaacacaaactcataaaatcgaaggttgtgaatgatgaggaagtagttcga
gttcctttagcttttgccatggttaaactaatgcartcccttccaagagaagttatggaa
actaatctgccaagtattttgctgaaagtgtgtgccctcctcaagaacagagcacaggaa
atcagagacattgcacgtagtaccctcgcaaaaataatagaggatctgggtgtgcattat
ctacaatatattttaaaagaattacagactacgcttgtgcgtggctatcaggtccatgtg
ctaactttcactgtctatatgttgctgcaaggccttaccaacaagctacaagtcgggagt
ttggactcttgtttggatataatgattgagatttttaaccatgarttgtttggtgccgtt
gctgaagagaaggaagtaaagcagatcctctccaaggtcatggaggcacgaagaagcaag
agttatgattcttatgaaatcttgggcaagtttgtaggaaaagatcaggttacaaaactt
atccttccactaaaagagatcttgcaaaataccacaagtttaaaactggcccggaaagtt
cacgaaaccttacgccgaatcatatcaggattacttgtaaaccaggaaatgacagcagaa
tccattctgttgcttagttatggtttggtcagcgaaaatctccccctgttaacacagaaa
gaaaaaaatccagcagcccctgcaccagatccacgcctgccaccccagagctgtcttctg
ctccccccaactccagttcgaggtggacagaaagctgtcgtgagcaagaaaaccaacatg
cacatatttattgagtctggacttcggctgttgcaccttagtctgaagacctccaaggtc
aagtcttcaagtgaacatgtcctggaaatgttggatccttttgtgtctctcctcatagac
tgcctgggttccatggacgtgaaggtgatcacaggtgctttgcaatgcctgatctggatc
ttgaggttccccctgccatcaatagaaacaaaagcagagcagctgacaaaacaccttttt
attttgctgaaggactatgcaaaactcggggctgccaggggccagaacttccacctggtg
gtaaactgtttcaagtgtgtgaccatacttgtgaagaaagtgaagtcgtaccagataact
caaaagcagcttcaggttctactagcatatgctgaggaggacatctatgatactacaaga
caagccactgcatttggtcttctgaaggccattttatcaagaaagttgttggtcccagaa
atggatgatgtcatgcggaaagtatccaagctggcaatctctgcacaaagygaacctgcc
agagtccagtgcagacaggtttttctgaaatacattcttgactatcctctgggtgacaaa
ttgcgaccaaacttggaattcatgcttgctcaactgacttatgaacatgagaccgggaga
gagtccgccttggaaatgattgcttatctctttgacacgttccctcagggactgctccat
gagaactgtggaatgttctttattcctctttgtctaatgatggtgaacgatgactctgcc
atgtgtaagaagatggcatccatggcaatcaaatccttactcagtaaaatcagccttgag
aaaaaagattggctcttcgatatggttaccacctggtttggggcaaagaagcacttaaat
cgacaactagctgccctgatctgtggcttttttgcggagagtgaaggagtcaattttgag
agaagacttggaattgttcttcctgtgattgaaaaggagattgatcctgaaaactttaca
gatatcatggaagagactgaagaaaaagctgcagatcgccttctgttcagttttcttata
ctgataagtaaactcatcaaggaatgtaatatcattcagtttaccaagccctctgaaact
ctgagtaaaatctggagtcacgtgcactcccacttgagatatccgcacagctgggtgtgg
ctcacagcagcccagatttttggattgctctttgcctcttgccaacctgaggaacttatt
agaaaatggcatgtcaaaaaaactaaaaagaaagtctcggaatctgtcgcaatccgcttc
ctaacaagtgaccttgagcaaaagatgaaaagtatctccctagcctcttgccatcagttg
cactccaaattcttggaccagtctctaggagagcaggttgttaagaatttgttgtttgta
gccaaagtcttatatttactggaacctgattctggggacataaaagaagacacggaagaa
caggaagttttaggtgatggcatggccggagagggtgtggaagaacacaaggcgtgtgca
gatgagaaagaagagcacagcaggccagccacactgctctggctgatccagaaattgtcc
cggatcgcaaaagtggaagctgcgtattcacctagaaatcccttaaagagaacatgcatc
tttaaatttcttggagccatagcaatggaccttggaatagacaaggtgaagccgtacctc
ccagtgatcatagcgcctttgttccgggaactgaacagcacctattcagagcaggatcct
tcactgaagaatctatcccaggaaatcatagaattactgaaaaagctggtygggctcgag
agcttctcattagcctttgcctctgtacagaaacaggctactgagaaaagggcactccgg
aaaaagagaaaggctttggagtttgtaactaatcctgatattgccgccaagaaaaagctg
aagaaacacaaaaataaaagcgaagcaaagaagagaaagattgagttcctgcggccaggc
tataaggccaagagacaaaagagccacagcctgaaagatttagcaatggtggaataa
DBGET
integrated database retrieval system
