Bos indicus (zebu cattle): 109559481
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Entry
109559481 CDS
T04792
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04722
Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
109559481 (PRDM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109559481 (PRDM4)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
109559481 (PRDM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf_PR_Knuckle
zf-C2H2
zf-C2H2_4
SET
zf-met
zf-C2H2_jaz
Mu-like_Com
PyrI_C
Motif
Other DBs
NCBI-GeneID:
109559481
NCBI-ProteinID:
XP_019816810
UniProt:
A0A6P5BU95
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Position
5:complement(76005756..76029726)
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AA seq
808 aa
AA seq
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MHHRMNEMNLSPVGMEQLTSSSVSNALPVSGSHLGLAASPTHNAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRP
PPQYIHPNSINVDGNTALSIANNPSALDPYQSNGNVGLEPGIVSIDSRSVNTHGAQSLHP
TDGHEVALDTTITMENVSRVTSPISTDGMAEELTMDGVAGEHTQIPNGSRSHEPLSVDSV
SSNLAAETVGHGGVIPMHGNGLELPVVMETDHIASRVNGMSDSALSDSIHTVAMSTNSVS
VALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVPPSLQME
DSNSNKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSX
VGADVVGVLPLIGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLE
FCIITTDENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPENELLFYYSRDYA
QQIGVPEHPDVHLCNCGKECSSYTEFKAHLSSHIHNHLPSHGHSSSHGPSHSKERKWKCS
MCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDK
SFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLR
TNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAQEEEEEDDSEEE
ELVDSVGTEDCRIGSAVYSADDSLSAHK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacaggatgaatgaaatgaacctgagtcctgtggggatggagcagctgacttca
tcttctgtgagcaatgccttgccggtctcagggagtcacctggggttggctgcctcaccc
actcacaatgccatccctgctccaggcctgccagtggcgattccaaacctgggtccctcc
ctgagctctctaccttctgctttgtctctgatgctcccaatgggtattggggatcgaggg
gtgatgtgtgggttacctgaaagaaactacaccctacctccaccaccttacccccacctt
gagagcagttacttcagaaccattttacctggcattttgtcttatttagctgacagacca
cctcctcagtatattcaccctaactccataaatgttgatggtaatacagcattatctatc
gccaataacccttcagcgctagatccctatcagtccaatggaaatgttggattagaacca
ggcattgtttcaatagactctcgctctgtgaacacacatggtgcccaaagtcttcatccc
actgatggtcatgaggtggccttggacacaacaatcaccatggagaacgtctctagggtc
accagcccgatctctacagatggaatggcagaagagctgacgatggatggtgttgcaggc
gagcatacccaaatcccaaatggctccagaagtcatgaacctctgtctgtggactctgtg
agcagcaaccttgcagcagaaactgtaggacatggtggtgtgatacccatgcatgggaac
ggcctggagctccctgtggtcatggagacagaccacattgcaagtcgggtcaacgggatg
tctgacagtgccctcagtgactccatccacaccgtggccatgagcaccaactctgtaagc
gtggcactctctacctcacacaacctcgcctccctagagtctgtttccctccatgaagtt
ggcctaagcctagaacctgtggctgtctcctccatcacccaggaggttgctatggggaca
ggtcatgtagatgtttcttcagacagtctttcttttgtaccgccttcactgcaaatggaa
gactccaattcaaacaaggaaaatatggcaaccttgtttacaatttggtgcactctctgt
gaccgagcctatccctcagactgccctgatcatggaccggtgacttttgttcctgacact
ccaatagagagcagagccaggctttctctcccaaagcagcttgttctccgccagtcartt
gtgggagcagatgttgttggtgtccttccactgataggtgtgtggactggagaaaccatc
cctgttcggacttgcttcgggcctctcattggccagcaaagtcactccatggaagtagca
gaatggacagacaaggcggttaatcatatctggaagatataccacaatggtgtcctagaa
ttctgcatcattacaactgatgaaaatgaatgtaattggatgatgtttgtgcgcaaagcc
aggaatcgggaagaacagaatttggtggcttatccccatgatggaaaaatctacttctgt
acttcccaagatatccctcctgaaaatgaactgcttttttattacagccgggattatgct
cagcagattggtgttcctgaacacccagatgtgcatctctgtaactgtggcaaggagtgc
agttcctatactgagttcaaagcccacctgagcagccacatccataaccaccttcctagc
cayggccacagcagcagccatgggccgagccatagcaaagagaggaagtggaagtgctcc
atgtgcccccaggcttttatctctccttccaaacttcacgtccactttatgggtcacatg
ggtatgaagccccacaagtgcgatttctgtagcaaggctttcagtgatcccagcaacctg
cggacccatcttaagatacacacaggtcagaagaactacaggtgtactttgtgtgacaag
tctttcacccagaaggctcacctggaatcccacatggtcatccacacgggggagaagaac
ctcaagtgtgactactgtgacaagttgttcatgcggaggcaagacctcaagcagcacgtg
ctcatccacacgcaagaacgccagatcaagtgtcccaagtgtgacaagttgttcttgagg
acaaatcacttaaagaaacatctcaattcacatgaaggaaaacgggattatgtctgtgaa
aaatgtacaaaggcttatctaaccaaatatcatctcacccgacacctaaaaacctgcaaa
gggcccacctccagttcatcagcacaggaggaggaggaggaagatgactcagaggaggaa
gagctggtggactcggtggggacagaggactgtcgcatcggcagtgctgtgtattcagca
gatgactctctctctgcacataaatag
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