Bos indicus (zebu cattle): 109560332
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Entry
109560332 CDS
T04792
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
109560332 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109560332 (SMARCAD1)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109560332 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
CUE
ERCC3_RAD25_C
TTC3_9th
Epsilon_antitox
Motif
Other DBs
NCBI-GeneID:
109560332
NCBI-ProteinID:
XP_019818008
UniProt:
A0A6P5BXG7
LinkDB
All DBs
Position
6:complement(32220731..32311241)
Genome browser
AA seq
1028 aa
AA seq
DB search
MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRAGTPDSDVT
EKTEDSSVPETPENDRKASISYFKNQRGIQYIDLSSDSEDVVSPNCSSTVQEKKFNKDTV
IIVSEPSEDEESQGLPTMATRNNNDISELEDLSELEDLKDAKLQTLKELFPQRSDSDLLK
LIDSTSTMDGAIAAALLMFGDAEGGGPRKRKLSSSSEPFEEDEFNDDQSMKKKRLDHGEE
SNESAESSTNWEKQESIVLKLQKEFPNFDKEELREVLKEHEWMYTEALESLKVFAEDQDM
QYASPSEFPNGKEVSSRSQNYPKNAAKTKLKQKCSMKPQNGFNKKRKKNVFNPKRVIEDS
EYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITEL
RPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIKLMNKCEDISNKLTKQVTMLTG
NGGGWNTEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY
LYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSRYEEYN
VIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGT
PVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPF
ILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYMNLFNRLKKSINNMEKNTEMCNVMMQL
RKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYR
HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL
RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ
AEDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIAT
LLKTSMGL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacctggaccgttttcgctttgagaaaagaaataagattgaggaagcg
cccgaagcaacccctcaaccctcccagcctggcccttcttcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaggcacccctgattcagatgtaact
gaaaaaacagaagattctagtgttccagaaactccagaaaatgacagaaaagcaagtata
tcgtatttcaagaatcaaagagggattcaatacattgatttgtcttctgatagtgaagat
gttgtttccccaaattgctccagtacagttcaagagaaaaaattcaacaaagacacggtg
attatagtttctgagccatctgaagatgaagagtcccaaggccttcctaccatggccact
agaaacaataatgatatttcagaattggaggacctttcggaattggaagaccttaaagat
gctaaacttcagaccttgaaggaactttttccacaaagaagtgacagtgatttacttaag
ttgattgactcaacaagcactatggatggagcaattgctgctgccttgctgatgttcggt
gatgcagaaggtggtggacccaggaaaagaaaattatcttcttcttcagagccattcgag
gaagatgaatttaatgatgatcaatctatgaaaaagaagagattggatcatggggaagag
tcaaatgaatctgcagaatctagcactaactgggaaaagcaggaaagtattgtgttgaaa
ttgcaaaaggaatttcccaattttgataaagaggaattaagggaagtactcaaggaacat
gaatggatgtacacagaggctttagaatctttaaaagtatttgcagaagaccaagatatg
cagtatgcttcaccgagtgagtttccaaatggaaaagaggtttcttcaagaagtcaaaat
tatcctaaaaatgcagctaaaacaaaactgaaacagaaatgttccatgaaaccacaaaat
ggttttaacaagaaacgtaaaaaaaatgtatttaatcctaaaagagttattgaagactct
gaatatgattcaggttctgatgtcggtagttcgctagacgaggactatagtagtggtgaa
gaagtgatggaggatggctataaaggtaaaatccttcacttccttcaagatgcttcaatc
ggtgaacttactttgattcctcagtgttctcagaaaaaggctcagaagataacagaactc
cggccctttaatagttgggaagctctgttcacaaagatgtccaaaacaaatggcttatca
gaagatttgatatggcactgtaaaacactgattcaggaaagggatgtagttataaagctt
atgaacaaatgtgaagacatttcaaataaactgacaaaacaagttaccatgctcactgga
aatggaggtggatggaacacagagcaaccctccattctaaaccaaagtttgtcactcaag
ccctatcagaaggttggtttgaattggctggccctggtacataaacatggacttaatggc
attttggcagacgaaatgggcctgggaaaaactattcaagctattgcatttctggcttac
ctctatcaggagggtaataaaggtcctcatttgattgttgttccagcatcaactatagat
aactggttaagagaagttaatttatggtgccccactttaaaggtgctctgttactatggt
tctcaagaagaacgtaaacagattagatacaacattcatagtagatatgaagaatacaat
gtaatcgtgaccacgtataactgtgccatcagcagttctgatgatcgtagtctgtttcgt
cggctgaaactgaattatgcaatttttgatgagggccatatgctgaagaatatgggctcc
atccgctaccagcaccttatgacaattaatgcaaataaccgtctgctgctcacaggcaca
cctgtgcaaaataacctgttagaactcatgtcgctgttgaattttgttatgccacatatg
ttcagtagtagcaccagtgaaatacgaagaatgttttcttctaagacaaaaccagcagat
gagcaaagtatatatgaaaaggagagaatagcacatgcaaaacaaattataaaaccattt
attctcagaagagtaaaagaagaggttctcaagcagctgccccccaaaaaagatcgaatt
gagttatgtgcaatgtcagagaagcaggaacaactctatatgaatctcttcaacagattg
aaaaagtctatcaataacatggaaaaaaatacagaaatgtgcaatgtcatgatgcaattg
agaaaaatggccaatcatcctttattacatcgccaatattacacagctgaaaaactcaag
gaaatgtctcagcttatgctaaaggaacctacacattgtgaggctaaccctgacctgatc
tttgaagatatggaagttatgacagactttgaattacatgtactttgtaaacagtatcga
catattaataacttccagttagacatggacttgattttagattctggaaaattccgagtt
ttaggatgcatcttgtctgaattgaagcagaagggtgatagagttgtattatttagccaa
tttaccatgatgctggatattttagaggttctcttaaaacatcatcagcataggtacctc
agattagatgggaagactcagatttctgaaaggattcatctaattgatgagtttaatacc
gatatggatatctttgtctttctgctgtcaacaaaagctggcggcttaggaataaacctg
acttcagcaaatgttgttatacttcatgatattgactgtaatccttacaatgacaaacaa
gcagaagatagatgccatagagtaggccagacgaaagaagtactagttataaaattaata
ggccaagggacaattgaagaatccatgctaaaaattaatcaacagaaattgaaactagaa
caagatatgaccacagtagatgaaggtgacgaaggaagtatgccagcagatatagccaca
ttactgaaaacatcaatgggcctgtga
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