Bos indicus (zebu cattle): 109560361
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Entry
109560361 CDS
T04792
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
109560361 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
biu00536
]
109560361 (SLIT2)
Glycosaminoglycan binding proteins [BR:
biu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
109560361 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRR_1
LRRCT
hEGF
EGF_TEN
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
109560361
NCBI-ProteinID:
XP_019818063
UniProt:
A0A6P5BXL8
LinkDB
All DBs
Position
6:41029737..41435334
Genome browser
AA seq
1534 aa
AA seq
DB search
MHGVGWQTLSLSLGLVLAILNEVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPE
LLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSDEEEGNQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT
NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY
GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF
SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF
RCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTA
ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN
VQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSL
STLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGN
DDNSCSPFSRCPAECTCLDTVVRCSNKALKVLPKGIPRDVTELYLDGNQFTLVPKELSNY
KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGND
ISVVPEGAFNDLAALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKL
LLTTPSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDV
PIHACISNPCKHGGTCHLKEGEKDGFWCICADGFEGENCEINVDDCEDNDCENNSTCVDG
INNYTCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPKGYKCDCTPGYIGEHCDID
FDDCQDNKCKNGAHCTDAVNGYTCTCPEGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQC
IIRINEPICQCLPGYQGEKCEKLVSVNFVNKESYLQIPSAKVRPQTNITLQIATDEDSGI
LLYKGDKDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSV
DGGSPKIITNLSKQSTLNFDSPLYVGGMPGKNNVAAALRQAPGQNGTSFHGCIRNLYINS
ELQDFRKVPMQTGILPGCEPCHKKVCAHGTCQPSSQAGFTCECEEGWTGPLCDQRTNDPC
LGNKCVHGTCLPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQAIKCKHGKCRLSGLGQPY
CECSSGYTGDSCDREISCRGERIRDYYQKQQGYAACQTTKKVSRLECRGGCAGGQCCGPL
RSKRRKYSFECTDGSSFVDEVEKVVKCGCTRCAS
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcgtcggctggcagacgctgtccctgtctctggggttagtgctggcgatcctg
aacgaggtggcgccgcaagcgtgtccggcgcagtgctcctgctccgggagcacagtggac
tgtcacgggctggcgttgcgcagtgtgcccaggaatatcccccgcaacaccgagagattg
gatttgaatggaaataacatcacaaggattaccaagacagattttgctggtcttcgacac
ctaagagttcttcagcttatggagaataagattaccaccattgaaagaggagcattccag
gatcttaaagaactggagagactgcgtttaaacagaaatcaccttcagctgtttcctgag
ttgctgtttcttgggacttcgaagctatacaggcttgacctcagtgaaaaccagattcag
gcaattccaaggaaagcttttcgtggggcagttgatattaaaaatctgcaactggattac
aaccacatcagctgtattgaagatggggcattcagggctctccgggacctggaagtgctc
actctcaacaataacaacattactagactttctgtggcaagtttcaaccatatgcctaaa
cttaggacttttcgactccattcgaacaacctatattgtgactgccacctggcctggctc
tcggactggctgcgccaaaggcctcgggtgggcctctacactcagtgtatggggccatct
cacctgaggggccacaatgtagctgaggttcaaaaacgagaatttgtctgcagcgatgag
gaagaaggtaaccagtcatttatggctccttcttgcagtgttttgcactgcccagctgct
tgtacctgtagcaacaacatcgtagattgccgtgggaaaggtctcactgagatccccacg
aatctgccagagaccatcacagaaatacgtttggaacagaactcaatcaaggtcatccct
cctggagctttctcaccatataaaaagcttagaagaatcgacctgagcaataatcagatc
tctgagctagcaccagatgctttccaaggactacgctctctgaattcacttgtcctctat
ggaaataaaatcacagaactcccaaaaagtttatttgaaggactgttttccttacagtta
ctattactgaatgccaacaagataaactgcctccgggtagatgcttttcaggatctgcac
aacctgaaccttctctccttatatgacaacaagcttcagaccatcgccaaggggaccttt
tcacctctccgggccattcaaaccatgcatttggcccagaacccctttatttgtgactgc
catctcaagtggctggcggattatctccataccaacccaatcgagaccagtggtgcccgc
tgcaccagtccccggcgactggcaaacaaaagaatcggacagatcaaaagcaagaaattc
cgttgttcagctaaagaacagtatttcattccaggtacagaagattatcgatcaaaatta
agtggggactgctttgccgatttggcttgccctgaaaagtgccgctgcgaagggaccaca
gtagactgctccaatcaaaaactcaccaaaatcccagatcacattccccagtacactgca
gagctgcgcctcaacaataatgaatttacagtgttggaagctaccgggatcttcaagaaa
cttcctcagttacgtaaaataaactttagcaacaataagatcacagacattgaagaggga
gcgtttgaaggagcatctggtgtgaatgaaatacttctcacgagtaatcgtttggaaaat
gttcagcataagatgttcaagggcttggaaagcctcaagactttgatgttgagaagtaat
cgcataagctgtgtagggaatgacagtttcataggactcagctctgtgcgtttgctttct
ttatatgataatcagattactaccattgcaccaggagcttttgatactctccattcttta
tctactctaaacctcttggccaatcctttcaactgtaactgctacctggcttggttggga
gaatggcttaggaagaaaagaattgtaacaggaaatcctcgatgtcagaaaccctatttc
ctcaaagaaatccccatccaggatgtggccattcaagacttcacttgtgatgatggaaat
gatgacaatagctgttccccattctctcgctgtcctgccgagtgtacctgcttggacaca
gtggttcgatgtagcaacaaagccttgaaggtcttgcccaaaggaattccaagagatgtc
actgaattgtatctggatgggaaccagtttaccctggttcctaaggaactctctaactac
aaacatttaacacttatagacttaagtaacaacagaataagcaccctctctaatcagagc
ttcagcaacatgacccagctcctcactttaattcttagttacaaccgtttgagatgtatt
cctcctcgaaccttcgatggactgaagtctcttcggttactttctttacatggaaacgac
atttctgttgtgcctgaaggtgctttcaatgatcttgctgcattatcacacctagcaatt
ggagccaaccctctttactgtgattgtaacatgcagtggttatccgactgggtaaagtcg
gaatacaaagagccgggaattgctcgctgtgctggtcctggagaaatggcagataaacta
cttctcacaactccctccaaaaaatttacatgtcaaggtcctgtggatgtcaatattcta
gctaaatgtaatccctgcttatcaaatccatgtaaaaatgatggcacctgtaacaatgac
ccagttgacttttatcgctgcacctgtccatatggtttcaaggggcaggattgtgatgtt
ccaattcatgcgtgcatcagcaacccatgtaaacatggaggaacttgccacttaaaagaa
ggagaaaaagatggattctggtgtatttgtgctgatggatttgaaggagaaaattgtgaa
atcaatgttgatgactgtgaagataatgactgtgaaaataactctacatgtgtcgatgga
attaataactacacatgcctttgcccacctgagtacacaggagagttgtgtgaggagaaa
ctggacttctgtgcccaggacttgaacccctgccagcatgactccaagtgcatcctgacg
ccaaagggatacaaatgtgactgcactccaggatacataggcgaacattgtgacattgac
ttcgatgactgccaagataacaagtgtaagaacggagcccactgcaccgatgcagtgaac
ggttacacatgcacctgtcctgaaggctacagtggcttgttttgtgaattttctccacct
atggttctccctcgtaccagcccctgtgataattttgattgtcagaacggagctcaatgc
atcatcaggatcaatgagccaatatgccagtgtttgcctggctaccagggagaaaagtgt
gaaaaactggtcagtgtgaattttgtaaacaaagagtcttatcttcagatcccttccgcc
aaggtccggcctcaaacaaacatcactcttcagatcgccacagatgaagacagtggaatc
ctcctgtataagggtgataaagaccatattgctgtagaactctaccgaggacgtgttcgt
gccagctatgacaccggctcccacccggcttctgccatttacagtgtggagacaatcaat
gacggaaattttcacattgtggaactacttgccctggatcaaagtctctccctctcagtg
gatggagggagccccaaaatcattaccaacttgtcaaaacagtccactctgaattttgac
tccccactctatgttggaggcatgcccgggaagaacaacgtggccgcagctctgcgccag
gcccctgggcagaatggcaccagcttccacggttgcatccggaacctttacatcaacagc
gaacttcaggacttccggaaggtgcccatgcagaccggcatcctgcctggctgtgaacca
tgccacaagaaggtgtgtgcccacggcacatgccagcccagcagccaggccggcttcacc
tgcgagtgcgaggaaggatggacagggcccctctgtgatcagaggaccaatgacccctgt
cttggaaataaatgcgtccacggcacctgcctgcccatcaatgcgttctcctacagctgc
aaatgcctagagggccatgggggcgtcctctgtgatgaagaggaggatctgtttaaccca
tgccaggcgatcaagtgcaagcatgggaaatgcaggctctcaggactggggcagccctac
tgtgaatgcagcagtggatacaccggggacagctgtgatcgagaaatctcttgtcgaggg
gaacggataagagattattaccaaaagcagcagggctacgccgcttgccagacgaccaag
aaggtgtctcggttggaatgcagagggggctgtgcaggcgggcagtgctgcggacctctg
aggagcaagagaaggaaatactctttcgaatgcactgatgggtcctcgtttgtggacgag
gtggagaaggtggtaaagtgtggctgtacccgctgcgcttcctaa
DBGET
integrated database retrieval system
