Bos indicus (zebu cattle): 109560384
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Entry
109560384 CDS
T04792
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
109560384 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
biu01009
]
109560384 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
biu04515
]
109560384 (PCDH7)
Protein phosphatases and associated proteins [BR:
biu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109560384 (PCDH7)
Cell adhesion molecules [BR:
biu04515
]
Cadherins
Protocadherins
109560384 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
Cadherin_pro
LYRIC
KIAA1549
MLANA
EphA2_TM
Adeno_E3_CR2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
109560384
NCBI-ProteinID:
XP_019818117
UniProt:
A0A6P5BYL0
LinkDB
All DBs
Position
6:51595759..52084178
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AA seq
1257 aa
AA seq
DB search
MLRMRTMGWARAWCLGCCLLLPLSLSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGGGGGEGRRAGPADSAPYTGGGGNGGSGGGPGGSKRRLDAPEAGGGTSPG
GRSSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLI
TDVNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLL
RLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIR
KIGRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEG
DQNKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLIVKVGDTNDNPPVFGQS
VVEVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPDSGDILVNTMLD
REQTDRYEFKVNARDKGVPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPV
GMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGG
DPPRSATATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTVVATVLATDSDDGINAD
LNYSIVGGNPFKLFEIDSTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVF
VNESVSNATVIDSQIARSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIV
VMARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASK
PNGQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKH
QAVQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQPFRRVTFSVVSQPQDPHQGS
LQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPLPDV
ALTGKCTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMG
DRNRNLLNKKLTSSYETFSAASFSKNEDANTEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgctaaggatgcggaccatgggatgggcgcgcgcctggtgtctgggctgctgtctcctc
ttgccgctctcgctcagcctagcggccgccaagcaactcctccggtaccgactggccgag
gagggcccagcagacgtccgcatcggcaacgtcgcctcggacttgggcatcgtgaccggc
tccggtgaggtgactttcagcctcgagtcgggctcagagtacctgaagatcgacaatctc
accggcgagctgagtacgagcgagcggcgcattgaccgcgagaaactgccccagtgtcag
atgatcttcgacgaaaacgagtgcttcttggacttcgaggtctcggtgatcgggccctcg
cagagctgggtggacctgttcgagggtcgggtcatcgtgctcgacatcaacgacaacacg
cccaccttcccgtcacccgtgctcacgctcacggtggaggagaaccggccggtgggcact
ctatacctgctgcccaccgccaccgaccgcgacttcggccgcaacggcattgagcgctac
gagctgctacaggagcccgggggcggcggmggcggcggcggcggcgagggccggcgcgcc
gggcctgccgacagcgccccctacaccgggggcggcgggaacggcgggagcggcggcggc
cctggcggctctaagaggaggctggacgcgccagaagccggcggcgggaccagccccggc
ggacgcagcagcgtattcgaactgcaggtggccgacaccccggatggcgaaaagcagccg
caattgatcgtgaagggggcgctggaccgcgaacagcgcgactcctacgagctgaccctg
agggtgcgcgacggtggcgacccgcctcgctcctctcaggccatcctgcgggtgctcatc
accgacgtgaacgacaacagcccccgcttcgagaagagcgtgtatgaggctgacctggcc
gagaacagcgccccggggacccccatcctgcagctgcgtgccgccgacctggacgtgggg
gtcaacgggcagattgagtatgtgttcggggcggctaccgagtccgtgcggcggctgctg
cgcctagacgagacgtccggctggctcagtgtcctgcaccgtatagaccgcgaggaagtg
aaccagctgcgcttcacggtcatggcccgcgatcgcgggcagcctcccaagacagacaaa
gccacggtggtccttaatatcaaggacgagaacgacaatgtgccgtccattgaaatccgc
aagatcgggcgtatcccactcaaggacggggtggccaacgtggccgaggacgttctggtg
gacacccccatcgccctggtacaggtgtctgaccgagaccaaggcgagaatggagtggtc
acctgcaccgtggtgggcgacgtgcccttccagctcaagccggccagtgacacagagggc
gaccagaacaagaaaaagtacttcctgcacacctcggcccctttggactatgagactacc
agggagttcaacgtggtcatagtagcggtggactcgggcagccccagtctctccagcaac
aactccctgattgtcaaggtgggagacaccaacgacaacccgcctgtctttggccagtca
gtggtggaggtgtactttcctgagaacaacatccccggagagagggtagccacggtgctg
gctacagacgcggacagtgggaaaaacgctgaaatcgcctactcgctggactcttccgtg
atggggatctttgccatcgatcccgattctggggacatcctcgtcaataccatgctggac
cgcgagcagactgacaggtacgagtttaaagttaacgccagagacaaaggcgtccccgtg
ctacagggcagcaccacagtgattgttcaggtggctgacaagaatgacaatgaccctaag
ttcatgcaggacgtctttactttttatgtgaaagaaaatttacagcccaacagccccgtg
ggaatggtcacagtgatggatgctgacaaggggcgcaatgcagagatgagcctatacata
gaggagaacagtaacattttttccattgaaaatgacacggggactatttactccacgatg
tcttttgacagagaacatcagaccacatacactttcagagtcaaagctgtggatggggga
gatccccccagatctgcaacagccacggtctctctctttgtgatggatgagaatgacaat
gctcccactgtcacccttcccagaaatatttcctacactttactgccaccttcgagtaac
gtcaggacagtagtagctacggtgttggcaacagacagtgatgatggcatcaatgcagac
cttaactacagcattgtgggagggaatcccttcaagctgtttgagattgattccaccagt
ggtgtggtttccttagtgggaaaactcacccaaaagcattatggcttgcacaggttggtg
gtgcaagtgaatgacagtgggcagccttcccagtctaccacgactctggtgcatgtgttt
gtcaatgaaagtgtttctaatgcaactgtgattgactcccagatagccagaagcttgcac
accccactcacccaggatatagctggtgacccaagctatgaaattagcaaacagagactc
agtattgtcattggggtggttgctggaattatgactgtgattctaatcatcttaattgta
gtgatggcaagatattgccggtccaaaaataaaaatggctatgaagctggcaaaaaagat
catgaagacttttttacaccccaacagcatgacaaatctaaaaaacctaaaaaggacaag
aaaaacaaaaaatctaagcagccactctacagcagcattgtcactgtagaagcttctaaa
ccaaatggacagaggtatgatagtgtcaatgagaagctgtcagacagcccaagcatgggc
cgataccgatcagttaatggtgggcctggcagtcctgacctggccaggcattacaaatct
agttcccccttgcctactgtccagcttcacccccagtcaccaactgcaggaaaaaaacac
caggccgtacaagatctaccaccagctaatacatttgtgggagcaggagacaacatttca
attggatcagatcactgctctgagtacagctgtcaaaccaataacaaatacagcaaacag
ccatttcgtagagtgacgttttctgttgtgagtcagcctcaggacccacatcaggggtca
ctgcagagttgctatgacagcgggctggaggagtcagaaacaccaagcagtaagagttca
tcagggccaagactgggtgcccttccactcccagaggacaactatgaaaggaccacgccg
gatggcagtgttggtgaggcagagcatatggaaaatgattcaagacctcttccagatgta
gccctgactgggaagtgtacccgtgagtgtgatgagtacggccattccgactcgtgctgg
atgcctgtccgcacttctccagagaggaagaagagccagcccaaactctccactttcatg
cctgttgatgaacgaggaagccaggaaaagctggctaatggtgaggccgccatcatgggc
gaccgcaacagaaacctcctgaacaaaaagttgacctcatcctatgagaccttcagtgcg
gctagtttcagcaaaaatgaggatgccaacactgaggatattccccttacaaaaacgggg
gaatacaagccatctcctgtcaatactctcactagaagagaagtttacctgtag
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