Bos indicus (zebu cattle): 109560471
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Entry
109560471 CDS
T04792
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109560471 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109560471 (FIP1L1)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109560471 (FIP1L1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
109560471
NCBI-ProteinID:
XP_019818311
UniProt:
A0A6P5BYB8
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Position
6
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AA seq
568 aa
AA seq
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MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHTDLAKDLDENEVERPEEENASANP
PSGIEDETPENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTAVGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYG
FNEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQG
RTGNAEKETVLPSTKAEFTSPPSLFKTGLPPSRRLPGAIDVIGQTITISRVEGRRRANEN
SNIQVLSERSATEVDNNFSKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPI
TVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYGNVAFPHLPGSTPSWPSLVD
TSKQWDYYSRREKDRDRDRDRDRERDRDRDRERERTRERERERDHSPTPSVFNSDEERYR
YREYAERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHK
KSKRSKEGKEAGSEPAPEQESTEATPAE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctttatggcggcccatgggacgtgcatgtgcacactgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgccaatcct
ccatctggaattgaagacgaaactcctgaaaatggcgtacctaaaccgaaagtgactgag
actgaagacgatagtgatagcgacagtgatgatgatgaggacgatgttcacgtcactata
ggagacattaaaacgggagcaccacagtatgggagttacggtacagcacctgtaaatctt
aacatcaagacaggaggaagagtttatggaactgctgtaggaacgaaagtcaaaggagta
gatcttgatgcacctggaagcattaatggagttccactcttggaggtagatttggattct
tttgaagataaaccatggcgtaaacctggtgctgatctttctgattattttaattacggg
tttaatgaagacacctggaaggcttactgtgaaaaacagaagaggatacgaatggggctt
gaagttataccagttacctctactacaaataaaattacggccgaagactgtactatggaa
gttacaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcaggga
agaactggaaatgcagagaaggaaacagtgcttccatctacaaaagcggagtttacttct
cctccttctttgttcaagactggactcccaccaagcaggagattacctggggcaattgat
gttattggtcagactataactatcagccgagtagaaggaaggcgacgggcaaatgaaaac
agcaatatacaggtcctttctgaaagatctgctactgaagtagacaacaattttagcaaa
ccacctccatttttccctccaggagctcctccaactcaccttccacctcctccatttctt
ccacctcctccaactgtcagcactgctccacctctgattccaccaccaggtattccaata
actgtaccacctccaggttttcctcctccaccaggtgctccacctccatctcttatacca
acaatagaaagtggacattcctctggttatgatagtcgttctgcacgtgcttttccatat
ggcaatgttgcctttccccaccttcccggttctactccttcatggcctagtcttgtggac
accagcaagcaatgggactattactcaagaagagagaaagaccgagatagagacagagac
agagaccgagagcgagatcgtgatcgagacagagaaagagaacgcaccagagagagggaa
agggagcgtgatcacagtcccacaccgagygtcttcaacagtgatgaagaacgatacaga
tacagggagtatgcagaaagaggctatgagcgccacagagcaagtcgggagaaagaagaa
cgacacagagaaagacgacacagagagaaagaggaaaccagacacaagtcctctcgaagc
aatagtagacgtcgccatgaaagtgaagaaggagacagtcataggagacacaagcacaaa
aaatctaaaagaagcaaagaaggaaaagaagctggcagtgagcctgcccctgaacaggag
agcaccgaagctacacctgcagaatag
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