KEGG   Bos indicus (zebu cattle): 109560641
Entry
109560641         CDS       T04792                                 
Symbol
HELQ
Name
(RefSeq) LOW QUALITY PROTEIN: helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
biu  Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:biu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:biu03400]
    109560641 (HELQ)
Enzymes [BR:biu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     109560641 (HELQ)
DNA repair and recombination proteins [BR:biu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    109560641 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DNA_pol_lambd_f DUF4332 alpha-hel2
Other DBs
NCBI-GeneID: 109560641
NCBI-ProteinID: XP_019818590
UniProt: A0A6P5BZH4
LinkDB
Position
6:complement(102057512..102098446)
AA seq 1065 aa
MDEGGSRIRRRVSVRKRNRPSLXSVFAASPATELKHSDEEKDDEEMVAGSRRRKTVDVQP
VEIIDSEEDMFGDYDSFAENSFLAQVDDLEQKYLQLPEHRNHATDHANEDLCSESDKHNT
LNVTVVGDCTELNIGDHTKNQSRHEDVSIEPEADILYDVPSSQVLFFENLHNSSSDLGGP
STEEKDWNSSFPKTVNEELPVNSREQPQQTVESSSKIRTSSDANRGKSLKDHLKSTMTGN
AKAQTPIFSRTKQLKETLLSEEINVAKKTIESSSDDLGPFYSLPSKVRDLYVQFKGIEKL
YEWQHTCLTLKSVQERKNLIYSLPTSGGKTLVAEILMLQELLCRRRDVLMILPYVAIVQE
KISGLSSFGIELGFFVEEYAGSKGKFPPIKRREKKSLYIATIEKGHSLVNSLIETGRISS
LGLVVVDELHMIGEGTRGAILEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQAEYYT
SQFRPVELKEYLKINDTIYEVNSRAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP
SYSCLVFCPTKKNCENVAEMICKSLSKEYLKHKEKEKQEVIQNLKNVSGGNLCRVLRHTI
PFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEKL
KRNQYKQMIGRAGRAGIDSVGESILILQEKDKQQVLQLISKPLENCYSHLVQEFTKGIQT
LFLSLIGLKIATNLDDIYXFMSGTFFGVQQKVLLKEKSLWEITMESLRYLTEKGLLQKDT
MCGSXEEFQNNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLMLESLLHLIYLTTPY
DMASQCDPDWMIYFRQFNQLSPAEQNVAALVGVSENFIGKKASGQAIRKKVDKNIVNRLY
LSFILYTLLKETNIWSVSEKFNMPRGYIQSLLSAAAAFSSCVLHFCEELEEFWVYRALLG
ELTKKLTYCVKAELIPLMEVTGVLEGRARQLYNAGYKSLTHLANANPEVLIRTIDHLSRR
QAKQIVSSAKMLLHEKAEALQEEVEELLRLPSDFPGLVASSTEKA
NT seq 3198 nt   +upstreamnt  +downstreamnt
atggacgaaggtggttcccgcatccgcaggcgggtgtccgtccgcaaaagaaaccgtcct
agtctagasagcgtttttgccgcctcccccgcgacagagcttaaacacagcgatgaagag
aaggacgacgaggagatggtggccgggagccggcggcggaaaaccgtggacgtgcagccg
gtcgagattattgacagtgaagaggacatgtttggtgactatgatagttttgctgagaac
tcttttttagctcaagttgatgacttggaacaaaagtatttgcaacttcctgaacatagg
aaccatgctacagaccatgcgaatgaagatctttgttcagaaagtgataaacataacacg
ctcaacgttactgttgtaggtgactgtacagaattaaatataggtgaccacacaaagaac
cagagcaggcatgaagatgtctctattgaacctgaagctgatattttgtatgatgtacct
tcttctcaggttttattctttgaaaatttgcataactcttccagtgatttgggtggtcca
tctactgaagaaaaagattggaactcatcctttcctaagactgtgaatgaggaattgccc
gttaatagcagagagcagccccagcagactgttgaatcctcttctaaaatcagaactagt
tcagatgcaaataggggaaaaagtctgaaagatcatctaaaaagtaccatgactggaaat
gccaaagcccaaacaccaatattttctaggactaaacagctcaaagagactctcctatct
gaagaaattaatgttgctaagaaaacaattgagtcatcatcagatgaccttggtcctttt
tattcattacccagcaaagtgagagatctttatgttcagttcaagggaattgaaaaatta
tatgaatggcaacatacttgcttaacattgaaatctgtgcaagaaagaaaaaatttaata
tattccttgccaacaagtggtggaaaaaccctcgtggctgagattttaatgctacaagaa
ctactatgccggcgaagagatgttttaatgatcctaccatatgtggcaattgttcaagaa
aagatttcaggtttgtcaagttttggtatagaactgggtttctttgttgaggaatatgct
ggaagcaaaggaaaatttcctccaattaaaagaagggaaaagaaatcattatatattgcc
actattgaaaaaggacatagtctggtgaactccttgattgaaactggaagaattagcagt
ctgggtctggttgttgtagatgagttgcacatgattggtgaaggaacccgtggggctata
ctggaaatgactctggccaaaatcctctacaccagcaaaacgactcaaattattggtatg
agtgcaacgttaaacaatgttgaagacctacaaaagttcctgcaagcagaatattacacc
agtcagtttagacccgttgaattaaaagaatatctgaaaataaatgacacaatatatgaa
gttaacagcagagctgagaatggcatgactttttcacgcctccttaattacaagtattcc
gatactctgaaaaagatggaccctgatcacttggtagcactggtgacagaagttattccc
agttattcctgcttagttttttgtcccactaagaagaactgtgaaaacgtagcagaaatg
atatgcaaaagtttaagcaaggaatatctgaagcacaaagagaaagaaaaacaggaggtg
attcagaacttgaagaatgtcagcggtggcaacctgtgtcgcgtgttaaggcacacyatc
ccgttcggagttgcttatcaccacagtggcttaaccagtgacgaaaggaagctcttggag
gaggcctactccacaggggtcctctgcctgttcacctgcacatccaccctcgcagcaggt
gttaacctaccagcgagaagagttatattaagagcaccctatgttgctaaggaaaaatta
aagaggaatcagtataaacagatgattggcagagctggccgtgctggaatagattctgtt
ggggagagtatccttatattgcaagaaaaagacaagcaacaggtattgcagttaataagc
aaaccattggaaaactgctatagccatcttgttcaggaattcaccaagggaatccagact
ttgtttctttctttgattggtttgaagattgcaacaaacctggatgacatatatygtttt
atgagtggtacattttttggtgttcagcagaaggttttgttgaaagaaaaaagtctctgg
gaaataactatggaatcacttagatacttgacagaaaaaggacttctacaaaaggatact
atgtgtgggtccraagaagagttccaaaataattttcatatcacaaagttgggacgagct
tcttttaarggaactatagatttggcttattgtgacattctttacagagacttgaagaaa
ggtcttgagggacttatgctcgaaagccttcttcatctaatctacttaacaactccctat
gatatggcttctcagtgtgaccctgattggatgatatacttcaggcagtttaaccaactc
agtccagcagaacaaaatgtygctgctctggttggagtctctgagaactttattgggaag
aaagcatcaggtcaagctattaggaagaaagtggacaagaacattgtcaacagactgtac
ctgtctttcattctttatactttgctcaaagagaccaacatttggagtgtgtctgaaaag
tttaacatgcctcgaggatatatacaaagccttctctccgcagctgcggcattctcctcc
tgtgtgttacatttctgtgaggagcttgaggagttctgggtttacagggcccttttggga
gaactcaccaagaagctgacctactgtgtaaaggcagagctaatcccactcatggaagtg
actggggttttagagggacgagcaagacagttatacaatgcaggttataaaagtctaacg
cacttagctaatgcaaatcctgaagtgctgataaggacaattgatcatttatcaagacgc
caggccaagcaaattgtttcatcagccaagatgctgttgcatgagaaagcagaggctttg
caagaagaagtagaagaattattgagattgccttctgatttccctggtcttgtggcctck
tctactgaaaaggcatga

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