Bos indicus (zebu cattle): 109561455
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Entry
109561455 CDS
T04792
Symbol
SIN3B
Name
(RefSeq) LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3b
KO
K23213
paired amphipathic helix protein Sin3b
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109561455 (SIN3B)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
109561455 (SIN3B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
109561455
NCBI-ProteinID:
XP_019819480
UniProt:
A0A6P5C1X8
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Position
7:complement(6634073..6677829)
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AA seq
1122 aa
AA seq
DB search
MVHAGGGGGVGPAGRGLSGARWGRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNG
FLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPL
SSQENSHSHSDCAESVKQQTLYKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYR
SFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFT
GNGPCEMNSVQKSEHEKNLEHSKKRSRPSLLRPVSAPAKKKMKLRGTKDLSIATVGKYGT
LQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVGPFLGKFPELFAQFKS
FLGVKELSFAPPMNDRSGDGISREIDYASCKRIGSSYRALPKTYQQPXCSGRTAICKEVL
NDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLS
RMAPEDQEKFRLDDCLGGTSEVIQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKA
KEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQ
EQHSEGRSAPSSEPHLIFVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLVHQFVP
SLFFSQQLDLGASEDSADEGRAIPQGQAADPGGDRKKPAPGPQSSPPEEKGAAGEAPAPE
PQPPQHKPLDDVYSLFFANNNWYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKEREKLL
CEGRREKGNDPAMELRLKQPSEVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIH
AYVGFTMDKLVQSIARQLHHLVSDDVCLKVVELYLNEKKRGAAGGNLSSRCVRAARETSY
QWKAERCMADENCFKVMFLQRKGQVIMTIELLDTEEAQTEDPVEVQHLARYVEQYVGAEG
ASSSPTEGFLLKPVFLQRNLKKFRRWQCEQVRALRGEAKSSWRRLVGVESACNVDCRFKL
STHKMLFIVNSEDYMYRRGTLCRAKQVQPLVLLRHHQHFAEWHSRWLEDNVTVEAASLVQ
DWLMGEDDEDMVPCKTLCETVRVHGLPVNRYRVQYSRRPASP
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgctggcggcggcggcggcgtcggccctgctggccgggggctgagcggcgcc
cgctggggtcgctcgggctccgggggccacgagaaactgccggtgcatgtggaagacgcc
ctcacctacctggaccaggtgaagatccgcttcggcagcgatcctgccacttacaatggc
ttcctggaaatcatgaaggagttcaagagccagagcatcgatacacctggcgtcatccga
cgagtgtcgcagctcttccatgaacaccctgacctcattgttggattcaacgctttcctt
cctcttggctacagaatagacattcccaagaatggcaagttaaacatacagtcgcctctg
tcgagccaggagaactcgcacagccacagtgactgtgcggagagcgtgaagcagcagacg
ctgtacaaggaggacaagccccaggtgcccttggagtccgattccgtggaattcaacaat
gccatcagctacgtgaacaaaattaagacccgctttctggaccacccggaaatctacagg
tccttcctggagatactgcacacttaccagaaggagcagctgagcacgaagggccgtccc
ttccgaggcatgtctgaagaggaggtatttactgaggtggccaaccttttccgcggccag
gaggacctgctctccgagtttggacagttcctgcctgaagccaagcggtccctgttcaca
ggaaatgggccgtgcgaaatgaacagtgttcaaaagagcgagcatgagaagaacctggag
cacagcaaaaagcgctcccggccctccctcctccgtcccgtgtctgcaccagcgaagaag
aagatgaaactccgtggcaccaaagacctgtccatcgccactgtgggcaagtacgggact
ctgcaggagttctccttctttgacaaggtgcgcagggtgctgaagagccaggaggtctac
gagaatttcctccgctgcatcgccctcttcaaccaagagctggtgtccggctctgagctc
ctccagctggttggcccgttcctagggaaatttccagagctctttgcacagttcaagtcc
ttcctgggggtgaaagagctgtccttcgccccacccatgaatgacagatccggggacgga
ataagccgggaaatcgactatgcctcgtgcaagcgcatcggatccagctaccgggcgctc
cccaaaacctaccagcagcccnagtgcagcgggaggacagccatctgcaaagaggtgctg
aatgacacctgggtgtccttcccctcctggtctgaggactccaccttcgtcagctccaag
aagacgccctacgaggagcagctgcaccgctgtgaggatgagcgcttcgagttagacgtt
gtcctggagaccaacctggccacaatccgggtgttggagagcgtccagaagaagctgtcc
cgcatggcgccggaagaccaggagaagttccggttggacgactgtctggggggcacatcg
gaagtgatccagcgccgcgctatccaccgcatttacggcgacaaagccccagagatcatc
gagagcctcaagaagaaccctgtcaccgctgtccccgttgtcctaaaaaggctgaaggcc
aaggaggaggagtggcgggaggcccagcagggcttcaacaagatctggcgggagcagtat
gagaaagcgtacctcaagtccctggaccaccaggccgtgaacttcaagcagaacgacacc
aaggcgcttcgctccaagagcctgctcaatgagatcgagagcgtctatgacgagcaccag
gagcagcactcggagggccgcagtgccccctccagtgagccgcacctcatcttcgtgtac
gaggacaggcagatcctggaggacgcggccgccctcatcagctactacgtgaagcggcag
ccagccatccagaaggaggaccagggcaccatccaccagctggtgcaccagttcgtgccc
agcctcttcttctcccagcagctggacctgggtgcatctgaggactctgccgacgagggc
cgggccatcccccaggggcaggctgcagaccctggcggcgaccggaagaagccggcgcct
gggccgcagagcagccccccagaggagaagggggcygcgggcgaggcgccggccccggag
ccgcagccaccgcagcacaagcccctggacgaygtctacagccttttcttcgccaacaac
aactggtacttcttcctgcgcctccatcagaccctgtgctccaggctgctgaagatctac
cgccaggcgcagaagcagctcctggagtaccgcacggagaaggagagggagaagctgctg
tgcgagggccgccgtgagaagggcaacgaccccgccatggagctgcggctgaagcagccg
agtgaagtggagctggaagagtactacccrgccttcctggacatggtgcggagcctgctg
gagggcagcatcgaccccacgcagtatgaggacacgctgcgygagatgttcaccatccac
gcctacgtgggcttcaccatggacaagctggtgcagagcatcgcccggcagctgcaccac
cttgtgagcgacgacgtctgtctaaaggtggtggagctctacctgaacgagaagaagcgg
ggcgccgcgggcgggaacctgtcctcccgctgtgtccgtgccgcccgggagaccagctac
cagtggaaggccgaacggtgcatggccgacgagaactgcttcaaggtgatgttcctccag
cgcaaagggcaagtgatcatgaccattgagctcctggacaccgaggaagcccagacggag
gaccctgtggaggtccagcacctggctcggtacgtggagcagtacgtgggagcggagggc
gcctccagctcgcccaccgagggcttcctcctgaagcccgtgttcctgcagaggaacctc
aagaagttccgccgctggcagtgtgagcaggtgcgtgcgctccgcggcgaggccaagagc
tcctggaggcggctggtcggggtggaaagcgcctgcaacgtggactgccgcttcaagctc
agcacccacaagatgctgttcatcgtgaactcygaggactacatgtaccgccgagggacg
ctgtgccgggccaagcaggtgcagcccctggtccttctgcgccaccaccagcactttgcg
gagtggcacagccgctggctggaggacaacgtgacagtggaggcagccagtctggtgcag
gactggctgatgggggaggacgacgaggacatggtgccctgcaagacgctctgcgagacg
gtgcgcgtgcacgggctgcccgtgaaccgctaccgcgtgcagtacagccgccgcccggcc
tcgccttga
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