Bos indicus (zebu cattle): 109561502
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Entry
109561502 CDS
T04792
Symbol
RFX1
Name
(RefSeq) LOW QUALITY PROTEIN: MHC class II regulatory factor RFX1
KO
K09173
regulatory factor X 1/2/3
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109561502 (RFX1)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Other basic domains
RF-X
109561502 (RFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
109561502
NCBI-ProteinID:
XP_019819563
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All DBs
Position
7:9903013..9934749
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AA seq
972 aa
AA seq
DB search
MATQAYVTELQAAPQPSQPPQAPPQAQPPPPPSAAPQPPQPPATAATPQPQYVTELQNPQ
PQAQPPGSQKPYVTELPAAPTPSQPAGAPTPSPASQQYIVVTVSEGAMRASETVSEASPG
STASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTNIPVSQQALPTQRLVVQS
TAPGGKGGQVSLTVHGTQQVHSPPERSPVQANSSSGKTAGAPTGTVPQQLQVHGVQQSVP
VTQERSVVQATPQVPKAGPVQQLTVQGLQPVHVAQEVQQLQQVPVSHVYPSQVQYVEGGD
ASYTASAIRSSTYSYSETPLYPQTAGTSYYEAAGTAAQVSTPATSQAVASSGSVPMYVSG
SQVVASSTSSGSGASSSSGSGSGSSSSGGGGGGGGGGGGGGSGGGAGTYVIQGGYMLGGA
SQSYSHTTRASPATVQWLLENYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLI
RSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQ
KMEGMTNGVAVGPQQATGLSDISAQVQQYQQFLDASRKPPDFSELDLQGKVLPEGIGPGD
IKXXQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPK
ASLVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTH
AMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFA
NVQVSAGRAGDELVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSTGFPKAAK
LFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMG
EFANLATSLNPLDPDKDEEEEEEEDSEDELPQDISLAXXGESPALGPEALEPPAKLARTD
ARGLFVQALPSS
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacaggcgtacgttactgagttacaggcggccccgcaaccatcccagccacca
caggctccgccgcaagcccagccgccaccgccgccctctgcggcaccccagcccccccag
ccccccgccaccgccgccaccccccagccccagtatgtcaccgagctgcagaatccgcag
ccccaggcacagccaccgggcagccagaagccgtatgtgacagagctcccggctgccccc
acgccctcgcagccggccggcgcacccaccccgtccccggcgtcccagcagtacatcgtg
gtcaccgtctccgagggtgccatgcgggccagcgagactgtgtcagaggccagcccgggc
tccacggctagccagaccggagtccccactcaggtggttcagcaggtgcagggcacccag
cagcggctactggtccagacaagtgtgcaggccaagccgggccacgtgtcacccctccag
ctcaccaacatcccggtgtcccagcaggctcttcccacgcagcgtctggtagtgcagagc
acagccccgggcggcaagggcggccaggtctccctgacggtgcatggcacccagcaagtg
cactcaccccccgagcggtcaccggtgcaggccaacagctcctccggcaagacggccggr
gcccccacgggcacggtgccacagcagctgcaagtccatggcgtccagcagagtgtcccc
gtcacccaagagaggtcggtggttcaggccactccacaggtgcccaaagctggccccgtg
cagcagctcaccgtgcaaggactccagccggtccatgtggctcaagaggtgcagcagctc
cagcaggtgccggtctcacacgtgtaccccagccaagtgcagtacgtggagggtggcgat
gccagctacacggcgagtgccatccgctccagcacctactcctactctgagacgccactg
tacccgcagacggcaggcaccagctactacgaggccgcgggcacggctgcccaggtcagc
accccggccacttcccaggcggtggccagcagcggctccgtgcccatgtacgtgtctgga
agccaggttgtcgccagctccaccagcagtgggagtggagccagcagcagcagcggcagc
ggcagcggcagcagcagcagcggcgggggtggtgggggtgggggtggtggcggcggcggc
ggcagcggcggcggagcaggcacctacgtgatccaaggcggctacatgctgggcggtgcc
agtcagtcctactcgcacaccacccgtgcctcaccagccaccgtccagtggctcctggaa
aactatgagacggccgagggcgtgagcctgccgcggagcaccctgtactgccactacctg
ctgcactgccaggaacagaagctggagcccgtcaacgccgcgtccttcggcaagctcatc
cgctctgtcttcatgggcctgcgtacccgcaggctgggcaccaggggcaactccaagtac
cactactatggcctgcgcatcaaggccagctcgcccctgctgcggctgatggaggaccag
cagcacatggccatgcggggccaacccttctcccaaaaacagaggctgaaacccatccag
aaaatggagggcatgaccaacggcgtggccgtggggccacagcaggccactgggctctcg
gacatcagcgcccaggtccagcagtaccagcagtttctggatgcctcaagaaagcctccc
gacttctcagagctggatctccagggcaaagtgctgcccgagggcatcggacctggggac
atcaagnccytccaggtcctataccgggaacactgtgaggccatcgtcgatgtcatggtg
aacctgcagttcacactggtggaaacgctctggaaaaccttctggaggtacaacctgagc
cagcccagcgaggcgcctccgctggctgtgcacgatgaggctgagaagcggctgcctaag
gccagcctggtgctcctctccaagtttgagcccgtgctgcagtggaccaagcactgtgac
aacgtgctgtaccagggcctggtggaaatcctcatccccgacgtgctkcggcccatcccc
agtgccttgacccaagcgatccggaactttgccaagagcctggagagctggctcacccac
gccatggtgaacatmcccgaggagatgctgcgggtgaaggtggcagcggccggcgccttc
gcgcagaccctgcgtcgctacacatcgctcaaccacttggcacaggcggcacgcgctgtg
ctgcagaacactgcgcagatcaaccagatgttgagcgatctcaaccgcgtggacttcgcc
aacgtgcaggtgagcgccggtagggcaggtgacgaactggtgcagcggctggagcaggac
ttcaaagtgacgctgcagcagcagaactcactggagcagtgggcggcctggctggatggc
gtcgtgagccaggtgctcaagccctaccagggcagcaccggcttccccaaagccgccaag
ctcttcctcctcaagtggtcgttctacagctccatggtgatccgggacctgaccctgcgc
agcgccgccagcttcggctccttccatctcatcaggctgctctacgatgagtacatgtac
tacctgatcgaacatcgtgtggcccaggctaagggcgagacccccatcgccgtcatgggc
gagttcgccaatctggccacctctctgaaccccctggacccggacaaagacgaggaggag
gaggaagaagaggacagcgaggatgagctgccgcaggacatctcgctcgcggnnngtggc
gagtcgcctgcgctgggccccgaggctctggagccaccggccaagctggcgcggacagac
gcgcgcggcctcttcgtgcaggcactgccctccagctaa
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