Bos indicus (zebu cattle): 109561817
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Entry
109561817 CDS
T04792
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04625
C-type lectin receptor signaling pathway
biu04668
TNF signaling pathway
biu04917
Prolactin signaling pathway
biu05133
Pertussis
biu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
109561817 (IRF1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109561817 (IRF1)
09152 Endocrine system
04917 Prolactin signaling pathway
109561817 (IRF1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
109561817 (IRF1)
09171 Infectious disease: bacterial
05133 Pertussis
109561817 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109561817 (IRF1)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109561817 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
109561817
NCBI-ProteinID:
XP_019820121
UniProt:
A0A6P5C3H8
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All DBs
Position
7:20655934..20663993
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AA seq
322 aa
AA seq
DB search
MPITRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAI
HTGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTKSQR
KERKSKSSRDARSKAKKKPYGEYSPDTFSDGLSSSTLPDDHSNYTVRSYMGQDLDIERTL
TPALSPCGVSSTLPNWSIPVEIVPDSTSDLYNFQVSPMPSTSEAATDEDEEGKLTEDIMK
LLEQTGWQQTSVDGKGYLLNEPGAQPTSVYGEFSCKEEPEVDSPGGYIGLISSDMKNMDP
SWLDSLLTPVRLPSIQAIPCAP
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcactcggatgcgcatgagaccttggctagagatgcagattaattccaaccaa
atcccagggctgatctggattaataaagaggagatgatcttccagatcccatggaagcac
gctgcgaagcatggctgggacatcaacaaggatgcctgtctgtttcggagctgggccatt
cacacaggccgatacaaagcaggggaaaaggagccggatcccaagacctggaaggccaac
tttcgctgcgccatgaactcgctgccagatattgaggaggtgaaggaccagagcaggaac
aagggcagttcagctgtgmgggtgtaccggatgctcccacccctcaccaagagccagagg
aaagagagaaagtccaagtccagccgagacgctaggagcaaggccaagaagaagccatat
ggggaatacagcccygataccttctctgatggactcagtagctccaccctgcctgatgac
cacagcaactacacagttcgcagctacatggggcaggacctggacatcgaacggactctc
actccagcgctgtcaccgtgtggcgtcagtagcactctccctaactggtccattccggtg
gaaattgtgccagacagcaccagcgacctgtacaactttcaggtgtcgcccatgccctcc
acctctgaagctgcaacagatgaggacgaggaagggaaattaactgaggacatcatgaag
ctcttggagcaaacagggtggcagcagacaagcgtggatgggaaggggtatctgcttaat
gaacctggggcccagcccacctctgtctatggagagttcagttgcaaggaggagccagaa
gttgacagccctgggggttatattggcctgatatcttcagatatgaagaacatggatccc
agctggttggacagcctgctcaccccagtcaggctgccctccatccaggccattccttgc
gcaccatag
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