Bos indicus (zebu cattle): 109562495
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Entry
109562495 CDS
T04792
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
biu02000
]
109562495 (TMC1)
03037 Cilium and associated proteins [BR:
biu03037
]
109562495 (TMC1)
Transporters [BR:
biu02000
]
Other transporters
Pores ion channels [TC:
1
]
109562495 (TMC1)
Cilium and associated proteins [BR:
biu03037
]
Other cilia and associated proteins
Stereociliary proteins
109562495 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
CDC45
Ac76
Toddler
Motif
Other DBs
NCBI-GeneID:
109562495
NCBI-ProteinID:
XP_019821111
UniProt:
A0A6P5C657
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All DBs
Position
8:51245171..51358792
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AA seq
792 aa
AA seq
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MIRHFIFVLDSSGGFVWEGLLSLVLQHYFEFQEMQISIDMQIQVEEKEDDTEESSKEEEE
NKLPRRQSLRPKRKRTRDVINEDDPEPEPEDEETRKAREKERRRRLKRGAEEEEEIDAEE
LERLKAELDEKRQMIATVKCKPWKMEKKIEVLKEAKKFVSENEGALGKGKGKQWFAFKMM
MAKKWAKFLRDFENFKAACVPWENKIKAIESQFGSSVASYFLFLRWMYGVNMVLFILTFS
LIMLPEYLWGLPYGSLPRKTVPRAEEASAANFGVLYDFNGLAQYSVLFYGYYDNKRTIGW
MNFRLPLSYFLVGIMCIGYSFLVVLKAMTKNIGDDGGGDDNTFNFSWKVFTSWDYLIGNP
ETADNKFNSITMNFKEAIIEERAAQVEENIHLIRFLRFLANFFVFLTLGGSGYLIFWAVK
RSQEFAQQDPDTLGWWEKNEMNMVMSLLGMFCPTLFDLFAELEDYHPLIALKWLLGRIFA
LLLGNLYVFILALMDEINNKIEEEKLVKANITLWEANMIKAYNASLAGNTTGPPFFVHPA
DVPRGPCWETMVGQEFVRLTVSDVLTTYVTILIGDFLRACFVRFCNYCWCWDLEYGYPSY
TEFDISGNVLALIFNQGMIWMGSFFAPSLPGINILRLHTSMYFQCWAVMCCNVPEARVFK
ASRSNNFYLGMLLLILFLSTMPVLYMIVSLPPSFDCGPFSGKNRMFEVIGETLEHDFPSW
MAKILRQLSNPGLVIAVVLVMALTIYYLNATAKGQKAANLDLKKKMKQQALENKMRNKKM
AAARAAAAAGGQ
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtcatttcatatttgtacttgacagttcagggggttttgtttgggaggggctt
cttagcttggttcttcagcattactttgagtttcaggagatgcagatcagcattgacatg
caaatccaagtggaggagaaagaagatgatactgaggaaagttcaaaggaagaggaggaa
aacaaactacctcgaagacagagcttgagaccaaagaggaaacggaccagagatgttatc
aatgaagatgatccagaacctgaaccagaggatgaagaaacaaggaaggccagagagaaa
gagagaaggaggaggttaaagagaggagcggaagaagaagaagaaatagatgcagaggaa
ttggaaagattgaaggcagagttagatgagaaaagacaaatgatcgctactgtcaaatgc
aagccttggaaaatggagaagaaaattgaagttctcaaggaagcaaaaaaatttgtgagt
gaaaatgaaggggctcttgggaaaggaaaagggaaacagtggtttgcatttaagatgatg
atggccaagaaatgggcaaaatttctccgagattttgagaacttcaaagctgcttgtgtc
ccgtgggaaaataaaatcaaggcaattgaaagtcagtttggctcatcagtggcttcatac
ttcctctttttgagatggatgtatggagtaaacatggttctctttatcctgacattcagc
cttatcatgttgccagagtacctctggggtttgccatatggcagtttacctaggaaaacg
gttcccagggctgaggaggcatcagcagccaactttggtgtcctgtatgacttcaatggc
ttggctcaatattccgtcctcttttatggctattacgacaataaacgaacaattggatgg
atgaatttcagactgccactctcctattttctcgtggggatcatgtgcattggatacagt
tttctggttgtccttaaagcgatgaccaaaaatattggtgatgatggaggtggtgatgat
aacactttcaactttagctggaaggtgttcactagctgggactaccttattggcaaccct
gaaacagcagacaacaaattcaattctatcacaatgaactttaaggaagctataatagaa
gaaagagcagcccaagtagaagaaaacatccacttgatcagattcctgaggtttcttgct
aacttcttcgtgtttctaacacttggcgggagtggatacctcatcttttgggctgtgaag
cgatcccaggaatttgcgcagcaagatcctgacacccttgggtggtgggaaaaaaatgaa
atgaacatggtcatgtccctcctgggsatgttctgtccaacactatttgacttatttgct
gaattggaagactaccatccgctcattgctctgaaatggctactgggacgcatttttgct
cttcttttaggcaacctgtatgtatttattcttgccctgatggatgagattaacaacaag
attgaagaggagaagctagtaaaggccaatattaccctatgggaagccaacatgatcaag
gcctacaatgcttcccttgctggaaataccactgggccacccttttttgtgcaccctgca
gatgtacctcgaggaccctgctgggaaacaatggtggggcaggaatttgtgcgactgact
gtttctgatgttctgaccacctatgtcacaattctcattggggactttctccgagcatgt
tttgtgaggttttgcaactactgttggtgctgggatttggaatacggatayccttcatac
actgagtttgacatcagcggcaatgtccttgctctgatcttcaatcaaggaatgatctgg
atgggctccttcttcgctcccagcctcccaggcatcaatatccttcggctccatacatcc
atgtacttccagtgctgggctgtgatgtgctgcaatgttcctgaggccagggtcttcaag
gcttccagatcgaataacttctacctgggaatgctcttgctcatcctcttcctgtccacc
atgcccgtcctgtacatgatcgtgtccctcccaccatcttttgattgtggscccttcagt
ggcaaaaataggatgtttgaagtcattggagaaacgctggagcatgatttcccaagctgg
atggcaaagatcttgagacagctttctaatcctggactggttattgctgttgttctggtc
atggctttgaccatctattatctcaatgctactgcaaagggccagaaggcagcaaatttg
gatctaaaaaagaagatgaaacagcaagctttggagaacaaaatgcgaaacaagaaaatg
gcagctgcacgagcagctgcagctgctggtggccagtaa
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