Bos indicus (zebu cattle): 109562876
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Entry
109562876 CDS
T04792
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109562876 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
biu04091
]
109562876 (FREM1)
Lectins [BR:
biu04091
]
C-Type lectins
Lecticans
109562876 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
109562876
NCBI-ProteinID:
XP_019821472
UniProt:
A0A6P5C8L6
LinkDB
All DBs
Position
8:31056324..31236718
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AA seq
2180 aa
AA seq
DB search
MSSPSWGGLGALLLLLLLPGWASPTFVRVNQGVRVMKGSSAFLSQDDLKFTIPKEKDACK
VEVVMNEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTVKLRLYRFTETDTFTE
TFILRVYLLEPDCNIIRMSDNALEVSEFYGLSRVIDKNLLRFDYERMASLECTVRLDPVG
THLPAHGQLVLVEPQLEEPRGDQPHSFFPESQLGTELKCPGGRCTLGLKKVGSLKVSCEE
FLLMGLRYQHLGSPSPNIDYFSIQLDLTDSRSKISYKSESAWLPVYIRPGIPNQIPRAAF
MAMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLWDHTRPVSSFT
WKDLRDMQIAYQPPNSSHSERRLYEVELEVYDFFFEKSAPITVHISIRTTDTNAPRVSWN
TGLNLLEGQSRAITWEQFQIVDNDDIHAVQVVTVDGLQHGRLTVRGGKGFLFTVADLQAG
VVRYHHDDSDSTKDFVVFRIFDSQHSIQHKFPINILPKDDSPPFLITNVVIELEEGQTIL
IQGSMLRASDMDSSDDYIFFNITKPPQAGEIMKKPAPGLIGYPVPGFIQRDLFNGIIYYR
HFGGEIFEDSFEFVLWDSHEPPNLSVPQVVTIHVTPVNDQLPKEAPGVSRHLVVKETEVA
YITKKHLHFIDTESQDRELLYTITTPPFFSSSRRHLDAGKLFMVDSIPRLTKTPAAPGLK
YFTQHAVNHMKVAYMPPMQDVGPHPRHVQFAFSVSNQHGGTLYGICFNITILPVDNQAPK
VFTKPLRVAEGGQCVISTQHVLVSDEDTKLDNIYLSLQSPPQHGMVELNGFPLNKGXTFP
WGXLQALKLRYQHDGSEELQDDIVLQVTDGTNAAEYVLHVEVFPVNDEPPVLKADLIPMM
HCSEGEEVVITSEYIFATDVDSDDLKLIFMIVGEPQHGTVRRAGVTVHQFSQEDVVAGAV
TYKHTGGEIGLMPCFDTITLVVSDREAGPFVNGCCYNGPHPSVPLHESFPMYDLNITVYP
VDNQPPSVAIGTTFVVDEGFSAALTVNHLSATDPDTAADDLEFVLVSPPQFGYLENTLPS
AGFEKSNMGISIASFQWKDMKALHINYVQSRHLGMEPTADKFVLYVTDGKRRSMEIPFYI
IINATNDEAPDFIVQNITVCEGQMRELDSSIISATDRDIPKNPLLFSITHKPRHGLLINR
AFSRNFFQYKQLANPGQKHELVYNFSMELLKNGMRLVYVHDDSESLADDFTXQVSDGKHK
ILKTIFVEVTPVNDEKPMLSKKAEITINMGETRIISSAVLSAIDEDSPREKXYYIFERIP
QNGQLQLKIGRDWVPLYPGMKCTQEEVDLNLLRYTHTGAMDSKNQDSFTFXLWDGDNRSP
AFDCHITIKNMGKGDIVILAKPLVVSKGDRGFLTTTTLLAVDGTDKPEELLYVITSPPQF
GQVEYVRYPGVPITSFSQMDIAGQTVCYVDKSTTAVHRDXFRFIVSNGLQTKPGXFEITL
ETVDTALPVVTRNKGLRLVEGATGLLSPDLLQLTDPDTPAEKLTFLLAQLPRHGQLYLRG
MALIPHNFTQLDVDSGHVAYRHLGGDSWTDHFTFVATDGTNHGFLVDGRVWQEPVSFTIQ
VDQLDKAAPRVTHLHSPSQVGLLKNGCYGIYITSHVLKASDPDTDDNQIIFKILRGPQHG
HLENSTTGEFIHEKFSQKDLNSKTILYIINPSLEVNSDTMEFQVMDPTGNSATPQSLELN
WSHIEWSRTEYEVCENMGMLPLEITRRGYSMDSAFVTVQVNQVSATVGKDFTMTPSKLVQ
FDPGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKTAVKILDSKGGQCHPSY
AFNSNMPSAWEKGIWHLLSPGASSPTTSDSFHLERRPLPTSKQLAVTRGDALRDFGSEDL
SPVKLRTRGDGKTVPPSSVYKNRTDIIYNYHGVISLKLEDDGSPARRRKANISFISEPQK
TTKVAEPPQADKEESTTGSHFPRQDPLPSFPKNCTPELKGLFHFEESLQKLYKCDGIAWR
SWSPHTKEVEDKSCPAGWHHHSGYCHSLITEQKGTWTTAAQACREHYQGSLVTVISRQHM
RWLWDISGRKPFWIGLNDQVRAGHWEWIGGEPVTFTNWRRGPPQRSRHGKDCVLVQRPGK
WHTKDCRKGKSHSYVCSRKL
NT seq
6543 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccaagctggggtgggcttggtgccctgctcctgctgctgctgctcccaggc
tgggccagccccacctttgtccgtgttaaccaaggggtcagggtgatgaagggcagttcc
gccttcctgtctcaagatgacctgaagttcaccatccccaaagagaaagatgcctgcaaa
gtggaagtcgtgatgaatgagccaataacccagagggttgggaaactcactccacaggtc
tttgactgccatttccttcccaatgaagtaaaatatactcataacggttgcccaattctt
gatgaagacacagtgaaacttagactttacaggtttactgagacagacaccttcacggaa
acctttatcctgcgggtctacctcctggaaccagactgtaacatcatccgcatgagtgat
aatgcactggaggtgtctgagttctatggcctgtcccgagtcattgataagaacctgctt
agatttgattaygagaggatggccagcctggaatgcacagtcagactggaccctgtggga
actcacctgccagcccacggccagttggttctggtggagccccagctggaagaacctcgc
ggagatcagccacatagtttcttccctgagtctcaattgggaacagagctgaagtgtcca
ggcggcaggtgtaccctgggactgaagaaagtcggaagtctcaaagtgagytgtgaggag
ttcctgctgatggggcttcgataccagcacctgggttccccttctcccaacattgattac
ttctccatccaactggacctcacagatagcaggagtaaaatctcatacaagtcagagagt
gcgtggttgcctgtctatatcagacctggaattcccaatcagattccaagagctgcattt
atggccatgtttattctggaagtggatcagttcatcctgacctcattgactacatcggtt
ctggactgtgaagaggatgagacccccaaacccttgctggtgttcaacattactaaagcc
ccactccagggctatgtgactcacctgtgggatcacaccagaccagtgtcctccttcacc
tggaaggatctaagggatatgcagattgcctatcagccaccaaacagcagccattctgag
aggagactttatgaggtggagttggaggtctatgacttcttctttgagaagagtgcacct
attacagtccacatttccatcagaacaacagatacaaatgccccgcgagtgtcctggaac
acaggtctgaatctcctggagggacagtctagggccatcacatgggaacagtttcagatt
gtggacaatgatgacattcatgctgtccaggtagtcactgtggatggcctgcagcatgga
cggcttactgtgagaggggggaaggggtttctcttcaccgtggctgaccttcaggctgga
gtcgttcgatatcatcatgatgacagtgactccaccaaagactttgtggtcttcaggata
tttgacagccagcacagcatccaacataagtttcccatcaacatcttgcccaaagatgac
agtccgccatttctcataacaaatgttgtgattgaactggaggaggggcagaccatacta
atccagggttccatgctgagagcttcagacatggactccagtgatgactacatcttcttt
aatatcacgaaacccccacaagctggagagatcatgaagaaaccagcaccaggactgata
ggctatccagtccctggcttcattcagagggatctattcaatggtattatttactatcgt
cactttggtggagaaatctttgaagattcatttgaatttgtcctgtgggacagccacgaa
cctccaaatctctcagtgccacaggtggtgacaatccatgtcactccagtaaatgaccag
cttccaaaagaggctcctggagtttctcggcatttagttgtcaaggaaacggaggtggcc
tacatcactaagaaacatctacattttatagatacagaatcacaagacagggagctgctc
tatacaataaccactcctccatttttctcctccagccgcagacacttagatgctgggaaa
ttgttcatggtggacagcataccaaggctaaccaagactcctgcagctccagggttaaag
tatttcackcagcacgctgtgaaccatatgaaagtggcctacatgccacccatgcaagat
gtaggtccgcatccaagacacgtccagtttgccttttccgtcagtaaccagcacggtggg
acgctrtatgggatctgctttaacatcacgattcttccggtggacaatcaggccccaaag
gtgtttaccaaacctctgagagtggctgagggaggtcaatgtgtcatcagcacacagcat
gtcctggtttctgaygaggacaccaaactggacaacatctacctctccttgcagagtcca
cctcagcatggaatggtggagctaaatggattccctctaaacaaagggaycacgtttcct
tggggagwcctccaggccttaaaacttagatatcagcatgatggatccgaggaacttcag
gatgacatagtactgcaggtcacagatggcacaaacgcagctgaatatgtcctacacgtt
gaggtgttccctgtaaatgacgagccaccagtgctaaaggcggacctcattcccatgatg
cattgctccgagggggaagaggttgtcatcacttctgaatacatttttgctactgatgtg
gacagtgatgatttaaagctgatattcatgattgttggagaacctcagcatgggaccgta
aggagagctggggtcacagtacatcagttctctcaggaagatgttgtcgcaggggctgtg
acgtacaagcacacaggtggtgagattggcctgatgccttgtttcgacaccattacattg
gtggtttcggacagagaagctggtccttttgtgaatggctgctgttacaatggacctcat
ccatctgttcctcttcatgagtcctttccaatgtatgatctcaacatcacagtgtatcca
gtggataaccaaccgccttcagttgccataggtaccacattcgttgtagatgagggcttc
tcagcagcccttactgttaaccatctgtctgccactgatcctgacactgcagcagatgac
ttggaatttgttttggtttctcctccccagtttggctaccttgaaaacacactcccttct
gcaggttttgaaaagagcaatatgggcatcagcatagcttcgtttcagtggaaagacatg
aaggctttacatattaactatgtgcagtccaggcatctggggatggaaccaacggctgac
aagtttgtgttgtatgtcactgatgggaagcgacgctccatggagataccattttacatt
ataatcaacgctacaaatgatgaagctcctgattttatagtgcagaatattactgtgtgt
gagggtcagatgagagagctggattcttccatcatcagtgctactgaccgggacattccc
aagaaccccttgctgttcagtatcacccacaaaccgcgtcatggcctcctcatcaacagg
gcatttagcagaaacttttttcaatataagcaactagccaaccctggccagaagcatgaa
cttgtctacaacttttccatggaacttctcaagaatggaatgaggttggtgtatgtgcat
gatgattcagagagtcttgctgatgactttacartccaggtgtcagatgggaaacataag
atacttaaaaccatttttgtagaggtcaccccagttaatgatgagaaaccaatgctgagc
aagaaggctgaaattacaataaatatgggcgaaactcgtattatttctagtgcwgttctc
tcagccatagatgaagactcacccagggagaagrtttactatatatttgaaagaattccc
caaaatgggcaacttcaacttaagatagggagggactgggtccctctgtaccctggcatg
aaatgcactcargaagaagtggatttgaacttgctgagatatacacacaccggggccatg
gaytccaagaaccaagacagcttcaccttccrcctctgggacggtgacaacaggtcaccg
gcatttgactgtcacatcaccatcaagaacatggggaaaggtgatattgtcatcctggca
aaaccacttgtggtgtctaaaggtgacagaggtttcctgacgaccaccactctccttgct
gtggatggaacagacaagcccgaggaacttctctacgtcatcacctccccgccgcaattt
ggccaggttgagtacgtccgctatcctggggtccccattacaagcttcagccaaatggat
atagcaggacagacrgtctgctatgtagataagagcacgacagctgtccacagagacrcg
ttcagattcatcgtcagcaatggacttcagaccaagcctgggrtttttgagatcacactg
gagactgtggacacagccttacccgtggtgaccaggaacaagggrttgagactggttgaa
ggggccacgggcctgctctcccctgacctcctgcagttgactgaccctgacactccagcc
gagaagctcacctttcttctggcccagctcccacggcatggccagctctacctgcggggg
atggcgctgatcccacacaatttcactcagctggacgtggacagtgggcatgtggcctat
cggcacttgggaggggattcttggactgaccacttcacttttgtggccacggatgggacg
aaccatggctttcttgtrgatgggagagtgtggcaagaacctgtatcattcaccatccag
gtggaccagttggacaaagcggccccccgcgtcacacacttgcattccccttctcaagta
gggctcttgaaaaatggttgttacgggatttacatcacctcccacgtgttgaaggcatca
gaccccgacactgatgataatcagatcatctttaagattttacgaggcccccaacatggg
catctggagaactcaacgacaggtgaatttatccatgagaaatttagccagaaggattta
aacagtaagaccattctttacatcataaacccatctttggaagtaaattcagataccatg
gaatttcaagtcatggatcccacagggaactctgccactcctcaaagtttggaactgaat
tggtctcatattgagtggtcgcggactgaatatgaggtctgtgagaatatgggcatgcta
cccttggagattaccagaaggggatattccatggattcagcctttgtgactgtacaggtc
aaccaagtgtcagctacagttggaaaggatttcaccatgactccatctaagctggtgcag
tttgacccaggaatgtcaactaagatgtggaatatagcaattacctatgacggattagag
gaagatgatgaggtctttgaagtaattctgaactcccccgtgaatgcggttcttggcaca
aagacaaaaactgcagtgaaaattttggactcaaaaggagggcagtgccatccttcatat
gccttcaattcaaacatgcccagtgcatgggagaagggcatttggcacctgctctcccca
ggggcttcctcacccaccacttctgattcctttcatctggaaagaagaccccttccaact
tccaagcagctagcggtcaccaggggtgacgccctgcgggactttggttctgaagatctt
tctccagtgaagcttaggacccgaggggatggcaaaacagttcctccatcctctgtttat
aaaaatagaacagacatcatctataactatcatggggtgatttccctgaaactggaagat
gacggctccccagctcgcagaaggaaggccaatatatcctttattagtgagccccaaaag
acaaccaaagtggcagaaccgcctcaagccgataaggaggaatccacaaccggctcacac
ttccccagacaggacccgttgccctcattcccaaagaactgcacaccggaattaaaggga
ctcttccactttgaagaaagcctccaaaaactgtacaagtgcgatggaattgcctggaga
tcctggagcccccacaccaaggaggtggaagataaatcctgcccagctgggtggcaccat
cattcaggctactgccactccttgatcacagagcagaaaggcacgtggactacagctgcc
caagcttgcagggaacattaccaaggcagccttgtaactgtcatctccaggcagcacatg
agatggctttgggacatcagtggaagaaagccgttttggataggtttgaatgaccaagtg
cgtgctggccactgggagtggattggcggtgaacctgtgaccttcaccaactggaggaga
gggcccccgcaacgttcaaggcatggcaaggactgtgttttggttcaaaggccaggaaaa
tggcacacaaaggactgtaggaagggaaaatctcacagttatgtgtgctccaggaaactc
taa
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