Bos indicus (zebu cattle): 109563048
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Entry
109563048 CDS
T04792
Symbol
EXOSC3
Name
(RefSeq) exosome complex component RRP40
KO
K03681
exosome complex component RRP40
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109563048 (EXOSC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109563048 (EXOSC3)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109563048 (EXOSC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP40_S1
RRP40_N_mamm
KH_6
RRP4_S1
Rrp40_N
Motif
Other DBs
NCBI-GeneID:
109563048
NCBI-ProteinID:
XP_019821785
UniProt:
A0A6P5C859
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Position
8:complement(64667553..64672257)
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AA seq
275 aa
AA seq
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MAEAAGVPAESLAGCRARAARTVLDQVVLPGEELLLPDQEDGDGPGGAGERPLRLNAAAR
SRGRVVCGPGLRXCGDRLLVTKCGRLRHKEPGSGSGGGVYWVDSQQKRYVPVKGDHVIGI
VTAKSGDIFKVDVGGSEPASLSYLAFEGATKRNRPNVQVGDLIYGQFVVANKDMEPEMVC
IDSCGRANGMGVIGQDGLLFKVTLGLIRKLLAPDCEILQEVGKLYPLEIVFGMNGRIWVK
AKTIQQTLILANILEACEHMTADQRKQIFSRLAES
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagcagcgggtgttccagcggagtccctggctggctgcagggcgcgggcagcg
cggacggtgctagatcaagtggtgctgccgggcgaggagctgctactgccagatcaggag
gacggagacggcccaggaggtgcaggggagcgaccgctgcgcctaaacgccgcagcgcgc
tcccggggacgcgtggtgtgcggcccaggcttgcgnngctgcggcgaccgactgctggtc
accaagtgcggccggctccgtcacaaggaacccggcagtggcagcggcggtggcgtttac
tgggtggactcgcagcagaaacggtatgtcccggtgaaaggagaccatgtgattggcata
gtgacagctaagtctggagacatattcaaagttgatgttggagggagtgagccagcttcc
ctgtcttacttggcatttgaaggtgcaactaaaagaaacagacctaatgtgcaggtcgga
gatctcatctatggccaatttgtggttgctaataaagacatggaaccagagatggtctgt
attgacagctgtggacgagccaatggaatgggtgtgattggacaggatggtctgcttttt
aaagtcactttgggcttaattagaaagctgttagctccagactgcgaaatcctacaagaa
gtgggaaaactctaccccctggagatagtatttggaatgaatggaagaatatgggttaag
gcaaaaaccattcagcagactctgattttggcaaacattttagaagcttgtgaacacatg
acagcagatcaaagaaaacaaatcttctccagattggcagagagctga
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