Bos indicus (zebu cattle): 109563063
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Entry
109563063 CDS
T04792
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03013
Nucleocytoplasmic transport
biu03015
mRNA surveillance pathway
biu03040
Spliceosome
biu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109563063 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
109563063 (NCBP1)
03015 mRNA surveillance pathway
109563063 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
109563063 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109563063 (NCBP1)
03041 Spliceosome [BR:
biu03041
]
109563063 (NCBP1)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
109563063 (NCBP1)
Spliceosome [BR:
biu03041
]
Common components
Common spliceosomal components
Cap binding complex
109563063 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
DUF1690
Cob_adeno_trans
Jnk-SapK_ap_N
DUF2524
Motif
Other DBs
NCBI-GeneID:
109563063
NCBI-ProteinID:
XP_019821809
UniProt:
A0A6P5C8G6
LinkDB
All DBs
Position
8:65647377..65684694
Genome browser
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKSNN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFASTENYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDFVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgagaacgatgggggacaacctcacaaaaggagaaag
acctctgatgcaaatgaaactgaagatcacttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggcttggctggtgttttggaagctgat
cttcctaactacaagagcaagatcttaaggcttctttgtacagttgcacgtctgttacct
gagaagttgaccatttatacaacattagttggactactgaatgccaggaattacaacttt
ggtggagaatttgtagaagccatgattcgccaactgaaagaatcattgaaatcaaacaat
tataatgaagctgtatatttggtccgttttctatctgatcttgtgaattgtcatgtcatt
gctgccccatcaatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtgcctcaggtgcggcgggattggtacgtgtacgcgtttctgtcgtccttgccctgggtt
ggaaaggaattgtatgaaaagaaagatgcagagatggaccgaatctttgccagcactgaa
aactatcttaaaagacgccaaaagactcatgtgcccatgttacaagtatggactgcagag
aaaccacatccgcaagaagagtatttagattgcctctgggcccagattcagaaattgaaa
aaggatcgctggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagccctgcagcacaacctgcctccattcacaccgccgcctcacactgaagactcg
gtgtacccgatgccgagggtcatcttcagaatgtttgattacacagatgatcctgagggt
cctgtaatgccagggagtcattcagtggaaagatttgtaatagaagagaatcttcactgc
atcattaagtcccattggaaggaaaggaagacttgtgctgcacagctagtgagttatcct
gggaagaacaagatccccttgaattaccacatagttgaggtgatctttgcagagctgttt
caacttccggcaccgcctcatatcgatgtgatgtacacgacacttctcattgaactgtgc
aaacttcagcctggctctctaccccaagttcttgcacaggcaactgaaatgttatatatg
cgtttggacacaatgaatactacatgtgtagacaggtttattaattggttttcccatcat
ctaagtaacttccaattccgttggagctgggaagattggtcagattgtcttactcaagat
ccagaaagtcccaaaccaaagtttgtaagagaagttctagaaaaatgtatgaggttgtct
taccatcagcgtatattagattttgtccctcctaccttctcagctctatgtcctgcaaac
ccaacctgcatttacaaatatggagatgaaagtagcaactctcttcctggacattcagtt
gccctctgtttagctgttgcctttaaaagtaaagcaaccaatgatgaaatcttcagcatt
ctgaaagacgtccctaatcctaatcaggatgatgatgatgatgaaggattcagctttaac
ccactgaaaatagaagtctttgtacagactctgctacacttagcagccaagtcattcagc
cactccttcagtgctcttgcgaagtttcatgaagtcttcaaaaccctagctgaaagtgat
gaaggaaaattacatgttctaagagtcatgtttgaggtctggcggaaccatccacagatg
attgctgtactagtagataagatgattcgtacacagattgttgactgtgctgcagtagca
aattggatcttctcttcagaattatctcgtgactttactagattgtttgtttgggaaatc
ttgcactccacaattcgcaagatgaacaaacacgttctgaagatccagaaagagctagaa
gaggctaaagaaaaactcgcaagacaacacaaacggcgaagtgatgatgatgacagaagc
agtgacaggaaagatggggctcttgaagaacaaatagaaagactgcaggaaaaagtggaa
tctgctcagagtgaacaaaagaatctcttccttgtcatatttcagcgttttatcatgatc
ctgactgagcacttagtacgctgtgaaactgatgggaccagtgtgttaacaccatggtat
aagaactgtatagagaggctccaacagatcttcctacagcatcaccaaataatccagcag
tacatggtgaccctggagaacctgctcttcactgctgaattagaccctcacatcctggct
gtgttccagcagttctgtgccctgcaggcctaa
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