Bos indicus (zebu cattle): 109563109
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Entry
109563109 CDS
T04792
Symbol
PDLIM2
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109563109 (PDLIM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
biu04990
]
109563109 (PDLIM2)
Domain-containing proteins not elsewhere classified [BR:
biu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
109563109 (PDLIM2)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
RunxI
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
109563109
NCBI-ProteinID:
XP_019821876
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All DBs
Position
8:72980903..72995230
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AA seq
564 aa
AA seq
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MGLPQRGRLQPLGGSRESSPGPPAGAGQVAAPGLGCTEEAASPARGXXWGGGRGGPGITW
VEAGLGVPGGLSPESGRRRRRRRERRLSLPPSFPSLRSRALPPSPTGEREPGERTHLCSG
RMAGVLPGPGALAVLCARGSLGARTSLRTAAPRSLACGRFPAWSWAFSSRALLLQPPGAP
VLWSQNLEGAXTGRAGPTGWALLSCPGAESTDQLKGMALTVDVVGPAPWGFRISGGRDFH
TPIMVTKVTERGKAEAADLRPGDIIVSINGESAKDMLHAEAQSKIRQSPSPLRLQLDRPQ
AASPGQANGESSXEVLATRFQSSRRTHTDSQASLSPRPCSPFFTLPPTSPQAPTGEVVTS
HSFQSLAYSLEPASADHLYYGGRRGSRQASLAPAGDSAVLVLPPPPSPGARSSSSRLSXV
SEGESHLLREDSEVFKMLQENREARMAPRQSSSFRLLQEALEAEERGGTPAYLPSSLSPQ
SSLPTSRALASPPKLHTCEKCNTSIANQAVRIQEGRYRHPGCYTCADCGLNLKMRGHFWV
GDELYCEKHARQRYSAPPTLNSQA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggggctaccccagagaggacggctgcagcctctagggggctctcgggagagtagcccc
gggcccccagcgggcgcgggccaggtggcagcgcccgggctgggctgcacggaggaggcg
gcctccccggccaggggcgannnctggggcggcggcaggggcggccctgggatcacatgg
gtggaggcaggtctcggagtcccgggcgggctctcccctgagtcaggcagacggcggcgg
cggcggcgggagcggcggctttccttgcctccctccttcccttcccttcgctctcgggcc
ttgccgcccagcccgacaggtgagcgggagccaggtgagcgcacccacctgtgctcgggg
cgcatggctggcgtcctccccggccccggcgccttggccgttctgtgcgcccgcggctcc
ctgggtgcccgaacctctctgcgcacggccgctccccgcagcctcgcctgcggtcggttc
cccgcctggagctgggctttctcctcccgggcgctcctactccagcccccaggcgcaccg
gtactttggtctcagaacttagaaggagcctgaactgggcgagccgggccgacgggctgg
gcacttcttagctgccccggcgcagagtccactgaccagctcaaaggtatggcactgacg
gtggatgtggtggggccagcgccctggggcttccgaatctctgggggcagggacttccac
acgcctatcatggtgaccaaggtaactgagcggggcaaggccgaggctgctgacctccgg
cctggtgacattattgtgtccatcaacggtgagagtgcaaaggacatgcttcacgccgag
gcccagagcaagattcgccagagcccctcacccctgaggctgcagctggaccggccccag
gctgcctctcccgggcaggcyaatggggaaagctcccyggaagtgctggccactcgcttc
cagagctccaggaggacacacactgacagccaggcctccctcagcccccgaccatgcagc
cccttcttcaccctgcccccgaccagcccccaggctcccactggagaggtggtgaccagc
cacagtttccagagcctggcgtactccctggaacctgcttctgctgaccacttgtactat
gggggccgccgtggaagccgacaggcatcactggcccctgctggcgactcagcggtgctg
gtactgccgccaccgccctccccgggtgcccgttcctccagctccaggctcagtgyggtc
tcagaaggcgaaagccacctcctgagagaggactcagaagtcttcaaaatgctgcaagaa
aaccgcgaggcacgaatggccccccggcagtccagctccttccggctcctgcaggaagcc
ctagaagctgaggagagaggtggaacacctgcctatctgcccagctcgctgagtccgcag
tcctccctgcccacctccagggctctggccagcccacccaagctccacacgtgtgagaaa
tgcaacaccagcatcgcgaaccaggccgtccgtatccaggaggggcggtaccgccatcct
ggctgctacacctgtgctgactgcgggctgaacctgaagatgcgagggcacttctgggtg
ggggacgagctgtactgcgagaagcatgcccgccaacgctactctgcacccccmaccctc
aattcccaggcctga
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