Bos indicus (zebu cattle): 109563312
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Entry
109563312 CDS
T04792
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu02010
ABC transporters
biu04148
Efferocytosis
biu04975
Fat digestion and absorption
biu04979
Cholesterol metabolism
biu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109563312 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109563312 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
109563312 (ABCA1)
04979 Cholesterol metabolism
109563312 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
109563312 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
biu02000
]
109563312 (ABCA1)
Transporters [BR:
biu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109563312 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
109563312
NCBI-ProteinID:
XP_019822226
UniProt:
A0A6P5CAR5
LinkDB
All DBs
Position
8:complement(99365484..99512535)
Genome browser
AA seq
2263 aa
AA seq
DB search
MAYWPQLRLLLWKNLTFRRRQTCQLFLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDARRLLLYSHRDT
SMKDIRKVLKTLYQIERFSSRLKLQDFLVDNETFSGFLHHNLSLPRPTVDKMLGADVSLR
KVFLQGYQLHLSNLCNGSKLGEVIRLGDQEVSRFCSLPREKLNAAQQVLRSNLDILKPVL
TKLNSTSLFPTEELGEATKALLDSLGNLAQELFSMRSWSDMRQEVMFLTNVNSSSSSTQI
YQAVSRIICGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEDDAGTVYDNSTSPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPVTRRLMTEVNKTFQELAVFHDLEGMWQELS
PKIWTFMESSSEMDLVRTLLDSRGNDDFWEQRLEGSDWTAKDIVAFLAKHPEDVQSTNGS
VYTWREAFNETNQAIQTISRFMECVNLNKLEPVATEVLLINKSMELLDERKFWAGVVFTG
IAPGSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLSVFATVTILQCFLISTLFSRANLAAACGGIIYFMLYLPYVLCVAWQDYVGFTLKIFVS
LMSPVAFGFGCEYFALFEEQGIGVQWDNLFESPTEEDGFNLTTSVSMMLFDTFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSSHKGASEICMEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKVVSELPPAGQSGGTGGEVQRLVALTQDVSAISNLIRKHVAEARLVE
DIGHELTYVLPYEAAREGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVD
AETSDGTLPARRNRRVFGDKQSCLRPFTEDDAMDPNDSDIDPESRETDLLSGMDGKGSYQ
VKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLE
LQPWMYNEQYTFVSNDAPEDVSTQELLNALTGKPGFGTRCMEGNPIPETPCLVGEEKWNT
APVPQTITDLFRNGNWTMENPSPTCQCSSDKIKKMLPVCPLGAGGLPPPQRKQNTADILQ
NLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSQSLPPSEEVNDAIKQM
KKHLKVVKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANL
QKGANPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQ
ERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVL
ALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNN
INDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAV
EGVVFFLITVLIQYRFFIRPRPVKAKLPPLNDEDEDVKRERQRILDGGGQNDILEIKELT
KVYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSIL
SDIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYG
EKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVV
LTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEF
FELAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFV
NFAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggcttactggcctcagctgagattgctgctgtggaagaacctcactttcagaagaaga
caaacatgtcaactgtttcttgaagtggcctggcctctattcatcttcctgatcctgatc
tccgtgcggctgagctatccaccctatgaacaacatgaatgccactttccaaacaaagcc
atgccttctgcaggaacacttccttgggttcaggggattatctgtaacgccaataacccc
tgtttccgttatccaactcctggtgaggctccgggagttgttggaaactttaacaagtcc
attgtgtctcgcctgttctcagacgctcggcggcttctcttgtacagccacagagacacc
agcatgaaggacatacgcaaagttttgaagacgttataccagatcgagcgtttcagctca
cgcttgaaacttcaggacttcctggtagacaatgaaaccttctctggattcctgcatcac
aacctctccctgccaaggccaactgtggacaagatgctgggggctgatgtcagtctccgc
aaggtatttttgcaaggctaccagttacatttgagcaacctgtgcaatggatcaaaattg
ggagaggtgattcgacttggtgaccaagaagtttctaggttttgcagcctgccaagggag
aagctgaatgcagcacaacaggtgcttcgttccaacctggatatcctgaagccagtcctg
acaaaactaaactctacatctctcttcccgaccgaggagctgggtgaagccacaaaagct
ttgttggatagtcttgggaatctggcccaagagctgttcagcatgaggagctggagtgac
atgcggcaggaggtgatgtttctgaccaacgtgaacagctccagctcctccacgcagatc
taccaggccgtgtcccgcatcatctgcggccatcccgagggcgggggcctgaagatcaag
tccctgaactggtacgaggacaacaactacaaggccctcttcggaggcaacggcacggag
gacgacgctggcaccgtctatgacaactctacatctccttattgcaatgatttgatgaag
aatctggagtccagtcctctttctcgcatcatatggaaagctctcaagcccctgcttgtt
ggaaagatcctgtatacacctgacactccagtcacaaggcggcttatgactgaggtgaat
aagaccttccaggaactggctgtgtttcatgatctagaaggcatgtggcaagagctcagc
cccaagatctggacctttatggagagcagctcagaaatggaccttgtccggacactgttg
gacagcagaggcaatgatgacttttgggaacagcgactggaaggctcagactggacggcc
aaagatatcgtggcatttctggccaagcacccagaggatgtgcagtccaccaacggctct
gtgtacacctggagagaagccttcaatgagaccaaccaggcaatccagaccatctctcgt
ttcatggagtgtgtcaacctgaacaagctagaaccagtagcgacagaggttctgctcatc
aacaagtccatggagctcttggatgagcgcaaattctgggctggggtagtgttcactgga
attgctcccggcagtgtcgagttaccgcatcatgtcaagtacaagatccggatggacatt
gacaatgtggagaggacgaataagatcaaggacgggtactgggaccctggtcctcgggct
gacccctttgaagatatgcggtatgtctggggaggcttcgcttacttgcaggatgtggtg
gagcaggcaatcatcagggtgctgacgggcacagagaagaaaactggcgtgtacatgcag
cagatgccttacccctgttatgttgatgacatcttcctgcgggtcatgagccggtccatg
cctctcttcatgacgctggcctggatctactcagtggctgtgatcatcaagggcattgtg
tacgagaaggaggcgcggctgaaagagaccatgcgcatcatgggcctggacaacggtatc
ctctggttcagctggttcatcagcagcctcatccctctgctcgtgagcgccggcctactg
gtggtcatcctgaaattaggaaacctgcttccctacagcgaccccagcgtggtgtttgtc
tttctgtctgtgttcgccacggtgaccatcctgcagtgcttcctgatcagcacgctcttc
tccagagccaacctggcggccgcctgtgggggcatcatttacttcatgctatacctgccc
tacgtcctgtgcgtggcgtggcaagactacgtgggctttaccctcaagatcttcgtgagc
ctgatgtctcctgtggcttttgggttcggctgtgagtacttcgcccttttcgaggagcag
ggcattggggtacagtgggacaacctctttgagagccccacagaggaagatggcttcaac
ctcaccacctccgtctccatgatgctgtttgacacctttctctatggggtgatgacgtgg
tacattgaggctgtgtttccaggccagtatggaatccccaggccctggtatttcccttgc
actaagtcctactggtttggcgaggaaagtgatgagaagagccaccctggttccagccac
aagggagcatcagaaatctgcatggaggaggaacccacccatctgaaactgggtgtgtcc
attcagaacctgatgaaggtttaccgggatggcatgaaggtggctgtggatggcctggcc
ttgaatttctacgaggggcagatcacctccttcctgggccacaatggagctggcaagacc
accaccatgtccatcctaactgggttgttccctcccacctcgggcactgcctacatccta
gggaaagacatacgctccgagatgagcaccatccggcagaacctgggggtctgtccccag
cataacgtgctgtttgacatgctgactgtcgaggagcacatttggttctatgcccgcctg
aaagggctctccgagaagcatgtgaaagctgagatggagcagatggccttggatgttggg
ttgccgcccagcaaactgaaaagcaaaacaagtcagctgtcaggtggaatgcagagaaag
ctgtctgtggccttggcctttgttgggggatccaaggttgtcattctggatgagcccaca
gccggtgtggacccttactcccgcagggggatatgggagctgctgctgaagtatcgacaa
ggccgcaccattatcctctccacgcaccacatggatgaggcggacatcctgggggacagg
atcgccatcatttcccatgggaagctctgctgcgtgggctcctccctgttcctgaagaac
cagctggggacaggctactacctgaccctggtcaagaaggacgtggagtcttccctcagc
tcatgcagaaatagcagtagcactgtgtcatacctgaaaaaggtggtgtctgagcttccc
ccagctgggcagagtggaggcacaggaggagaggtgcagaggctggtggcgctgactcaa
gatgtctctgcgatctccaacctcatcaggaagcatgtggctgaggcccggctggtggaa
gacattgggcatgagctgacctacgtgctgccctacgaggctgccagagagggagccttt
gtggaactcttccacgaaattgacgaccggctctcagacctaggcatctccagttacggc
atctcagagactactctggaagaaatatttctcaaagtggctgaagagagtggagtggat
gccgagacctcagatggcaccttaccagcaagacgaaacagacgagtctttggggacaag
cagagctgtcttcgcccttttactgaagacgatgctatggatccaaatgattctgacata
gatccagaatccagagaaacagacctgctcagtgggatggatggtaaaggttcctaccag
gtgaagggctggaagctcacacagcagcagtttgtggcccttttgtggaagagactgctg
attgccagaaggagtcggaaaggattctttgctcagattgtcctgccagctgtgtttgtc
tgcatcgccctggtgttcagcttgattgtgccaccctttggcaagtaccccagcctggag
cttcagccctggatgtacaatgaacagtacacatttgtcagtaatgatgcgcctgaggat
gtgagcacccaggaactcttaaacgctctcaccggaaagcctggctttgggacccgatgt
atggaaggaaacccgatcccagaaacgccctgcttggtgggagaggagaagtggaacact
gccccagtcccccagaccatcacggacctcttccgaaatggaaactggacaatggagaac
ccctcccccacctgccagtgtagcagcgacaaaatcaagaagatgctgcctgtgtgcccc
ctgggggcaggggggctgcctccgcctcaaagaaaacagaatactgctgacatccttcag
aacctcacgggaagaaacatttcggattatctggtgaagacatacgtgcagatcatagcc
aaaagcttaaagaacaagatctgggtgaaygagtttaggtacggtggattttccctgggt
gccagtaattctcagtcacttcctccgagtgaagaagttaatgatgccatcaagcaaatg
aagaaacacttgaaggtggtcaaggacagttctgcagaccgatttctcagcagcttggga
aggttcatgacaggactggacacaaaaaataacgtcaaggtgtggttcaacaacaagggc
tggcacgccatcagctctttcttgaatgtcatcaacaatgccattctccgggccaatctg
cagaagggagcgaaccccagccagtatgggattactgctttcaatcacccgctgaacctc
accaagcagcagctctcagaagtggctctgatgaccacatccgtggacgtcctcgtgtcc
atctgtgtcatcttcgcgatgtcctttgtcccggccagctttgtcgtgttcctgatccag
gagcgcgtcagcaaagcgaagcacctgcagttcatcagtggagtgaagcctgtcatctac
tggctctccaattttgtctgggacatgtgcaactacgtggttcctgccacgctggtcatt
atcatcttcatctgcttccagcagaagtcctatgtgtcctccaccaacctgcctgtgctc
gctcttctacttttgctgtatgggtggtccatcacacctctcatgtacccagcctccttc
gtgttcaagatccccagcacagcctacgtggtcctcaccagcgtgaacctcttcatcggc
atcaatggcagtgtggccacgtttgtactggagctcttcaccaacaataagctgaataac
atcaatgatatcctgaagtcagtgttcttgatcttcccacatttttgcctgggacggggg
ctcattgacatggtgaaaaaccaggcaatggctgatgccttggaaaggtttggggagaac
cgctttgtctcaccactgtcttgggacttagtgggacgaaatctctttgccatggctgtg
gaaggagtggtgttcttcctcatcactgtgctgatccagtaccgattcttcatcaggccc
agacctgtaaaggcaaagcttcctcctctgaatgatgaggatgaagatgtgaagagggaa
agacagagaattcttgatggtggaggacagaatgacatcttggaaatcaaggagttgact
aaggtatacagaagaaagaggaaacctgctgttgacaggatctgcgttggcattcctcct
ggtgagtgctttggacttctgggtgttaatggagctgggaaatcatcaactttcaagatg
ttaacgggagataccactgttaccagaggagatgctttccttaacaaaaatagtatctta
tcagacatccatgaagtccatcagaacatgggctattgccctcagtttgatgccatcaca
gagctgctgactggaagagaacacgtggagttctttgcccttttgagaggagtcccagag
aaagaagtaggcaaggttggcgagtgggcgattcggaaactgggccttgtgaagtatgga
gaaaaatatgctgggaactacagtggaggcaataagcgcaagctctcaacagccatggct
ttgattggtgggcctccagtggtgtttctggatgaaccaaccacaggcatggaccctaaa
gcccggcgcttcctgtggaattgtgccctaagtatcatcaaggaagggagatcagtagtg
cttacctctcacagtatggaagaatgtgaagctctctgcactaggatggccattatggtc
aacgggcggttcaggtgtcttggcagtgttcaacatctgaaaaataggtttggagatggt
tatacaatagttgtacgaatagcagggtcgaaccctgacctgaagcctgtacaggagttc
tttgaactcgcctttccaggaagcgtcctgaaggagaagcaccggaacatgcttcagtac
cagcttccgtcttcactgtcttccctggccaggattttcagcatcctttcccagagcaaa
aagcgactccacatagaagactactctgtctctcagacaacacttgaccaagtatttgta
aactttgccaaggaccaaagtgatgatgaccacttaaaggacctgtcattacacaaaaac
cagacagtagtggacgttgcagtcctcacatctttcctgcaggatgagaaagtgaaagaa
agttatgtatga
DBGET
integrated database retrieval system
