Bos indicus (zebu cattle): 109563325
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Entry
109563325 CDS
T04792
Symbol
IKBKAP
Name
(RefSeq) LOW QUALITY PROTEIN: elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
biu03016
]
109563325 (IKBKAP)
Transfer RNA biogenesis [BR:
biu03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
109563325 (IKBKAP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
CHASE4
MMU163
Beta-prop_EML_2
Herpes_UL37_2
Motif
Other DBs
NCBI-GeneID:
109563325
NCBI-ProteinID:
XP_019822250
UniProt:
A0A6P5C9J7
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Position
8:complement(103527374..103586686)
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AA seq
1340 aa
AA seq
DB search
MRNLKLLRSLEFRDIQAQGKPRCLCLRAEQATVLIGSEHGLVEVDPVTREVKHEIPLVAE
GFLPEDGSGCIIGIQDLLDQESVCVATASGDVLLCNLNTHQLECVGSVASGISVMSWSPD
QELLLLATGQQTLIMMTKDFEPIMEQQIHQDDFGESKFITVGWGRKETQFHGSEGRQAAF
QMQMHESALPWDDHSPQVTWRGDGQFFAVSVVCPETGARKVRVWSREFALQSTSEPVAGL
GPALAWKPSGSLIASTQDKPNQQDVVFFEKNGLLHGQFTLPFFKDEVKVNGLFWNADSTV
LAVWLEELQREENSSLKTYVQLWTVGNYHWYLKQSLPFDTCGKSKIVSLLWDPVSPYRLH
VLCQGWHYLCYDWHWTTDRSSGDNLSDMANVAVIDGNRVLVTVFRQSVVPPPMCTYRLQL
PHSVNQVMFSARPEKSNDLAVLDASNQISVYKCGDSPSIDCTVKLGAVGGNGFKISLRTP
HLDKRYKIPIEDSEAEEVNPLKFSLLAWVQEDVFLAVSHSQSGPQSAIHHLTVAPSETDD
KQGQLNISSSVTVDGVIISLCCNPKTKSVALQVAGGQIFKYLWESPSLAVEPWKNPGGLP
VXFPYPCTQTELAMVGGEECILGLTDRCRFFINDTEVASNITSFAVYDEFLLVTTHSHTC
QCFCLRDASLKTLQAGLSSSHVPNGESLRKVERGSRIVTVVPQDTKLILQMPRGNLEVVH
HRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDHNPKVFLENVETFIRQIDSVNHI
NLFFTELKEEDVTKTMYPPPVPSTVPLSSDPDEKKVDLICDAMRAAMENINPHKYCLSIL
TSHVKKTTPELEIALQKVHXLQGSAPPVPDTVSAEEALKYLLLLVDVNELYDHSLGTYDF
DLVLMVAEKSQKDPKEYLPFLNTLKKMEMNYQRFTIXXLIKKVEKTLGWSXXCVCVNLTP
VGPEYFPECLNLIKDKNLYNEALKLYPPNSQQYKDISIAYGEHLLQEHLHEPAGLVFARC
GAHEKALSAFLACGSWQQALCAAAQLHLTAEQLAGLGRTLAGKLVEQRKHSDAATVLEQY
AQDHEEAVLVLLEGAAWEEALRLVHKYNRPDIIETNIKPSILEAQKNYMAFLDSQTATFS
RHKKRLLVVRELKEQAQPVSLDDEAPHGPESDLFSETSSVMSGSNLSGRYSHSNSRISAR
SSKNRRKAERKKHSLKEGSPLEDVALLEALSEVVQGTEKLKDEICRILKMLFLFEFDEQG
RELQKAFEDTLQLMERSLPEIWTLTPQQSSATPVLGPNSTANSIMASYQQQKTSVPVLDA
ELFMPPKINRRTQWKLSLLD
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatctaaagttacttcggagcctggagttcagggatattcaggctcaagggaaa
ccacggtgcctctgtctccgagccgagcaggcgacagtgctcatcggctcagagcatgga
ctggtggaggtagaccctgtcacgagagaggtgaaacatgaaattcctttggtggcagaa
ggctttctcccagaggatggaagtggctgcatcattggtattcaggacttgctggatcag
gagtctgtgtgtgtggccacagcttctggagatgtcctgctttgtaatctcaacacacac
cagctggaatgtgtcgggagtgtagccagtggtatctctgtcatgagttggagtcctgac
caagagctgctgctgcttgccacaggtcaacaaaccctaattatgatgacaaaagacttt
gaacctatcatggaacagcaaatccaccaggatgattttggtgaaagcaagttcatcact
gttggttggggcaggaaggagacgcagttccatggatctgaaggcaggcaagcagctttt
cagatgcaaatgcatgaatctgctttgccctgggacgaccatagcccacaagttacctgg
cgtggcgatgggcagttttttgctgtgagtgttgtttgtccagagacaggggctcgaaag
gtcagagtgtggagccgggagttcgctttgcagtcaaccagtgagcccgtggccggactg
ggacctgctctggcttggaagccttcaggcagtttgatcgcatctacgcaagataaaccc
aatcaacaggatgttgtgttttttgagaaaaatggacttcttcatggacagtttacactt
cctttcttcaaagacgaggttaaggttaatggccttttctggaatgcagattccactgtg
cttgcagtttggctggaagaacttcagagggaagaaaattcgtctctaaaaacctatgtt
cagctctggactgttggaaactatcactggtatctcaagcaaagtctgcccttcgacacc
tgtgggaagagcaagatcgtgtccctgctgtgggacccggtcagcccgtaccggctgcac
gttctctgtcaaggctggcactacctctgctatgactggcactggacractgaccggagc
tcgggagataatctgagtgacatggcaaatgtggctgttattgatggaaaccgggtcctg
gtgacggtcttccggcagagtgtggttccgcctccgatgtgcacataccggctgcagctc
ccgcactctgtgaatcaggtcatgttctcggcacgccctgaaaagagtaacgacctcgct
gtcctagacgccagcaaccagatttctgtttataaatgtggtgatagtccaagcatagac
tgtacggtgaaactgggagctgtgggtggaaatggatttaaaatttcccttagaacgcct
catctggacaaaagatacaaaattccgattgaggacagtgaagctgaagaagtaaaccca
ttgaagttcagcctgctcgcctgggttcaggaagacgttttcctggccgtgagccacagt
cagtccggcccccagtctgccattcaccatctgactgtggccccttctgagacggatgac
aagcagggacagctcaacatcagttcatctgtgacagtggacggggtaataatcagtcta
tgttgcaaccccaagaccaagtcagtagccctgcaggtggctggtggccagatatttaag
tacctttgggagtcaccttctctggctgttgaaccgtggaagaaccctggggggctccct
gttcrgtttccttatccgtgcacgcagactgaattggccatggttggaggagaggaatgt
atccttggtctgactgacagatgtcgctttttcatcaatgacactgaggttgcatcaaat
atcacatcatttgctgtatatgatgagtttttattggtgacgactcattctcatacttgc
cagtgcttttgcctgagagatgcttcattgaaaacattgcaggcaggtctgagcagcagc
cacgtgcctaacggcgagtctctgcggaaggtggagaggggttcacgcatcgtcactgtt
gtgcctcaagacacaaagcttatattacagatgccaaggggaaacttagaagttgttcat
catcgagccctggttttagctcagattcgaaagtggttggacaaacttatgtttaaagaa
gcatttgaatgcatgagaaaactgagaattaatctcaatctgattcatgatcacaaccct
aaggtgtttcttgaaaatgtggaaaccttcataagacagatagactctgtgaatcatatt
aatttatttttcacagaattgaaggaagaagatgttacaaagaccatgtatcctccacca
gttcccagcactgttccactgtccagcgatcctgatgagaaaaaagtagaccttatctgt
gatgctatgagagcagccatggagaacataaaccctcacaagtactgcctgtcaatactc
acctctcatgtgaagaaaacgaccccagagctggagattgcactgcagaaggtacacraa
cttcaaggaagtgctccaccagtccctgacactgtgagtgccgaagaggccctgaagtat
ttgctgcttctggtagatgttaatgaattatatgaccattctcttgggacctatgacttt
gatttggtcctcatggtagctgagaagtcacagaaggatcccaaagaatatcttccattt
ctgaatacacttaagaaaatggaaatgaattatcagcggttcactatannnnttcttatt
aagaaggttgagaaaacactgggctggtcttaagsttgtgtgtgtgtgaatcttactcct
gtaggaccggagtacttcccagaatgcttaaacttaataaaagataagaacttgtataac
gaagctctgaagctctacccaccgaactcgcagcagtacaaggacatcagcattgcttac
ggggaacacctgctgcaggagcacctccatgagccggcagggctcgtgttcgcccgctgc
ggtgctcacgagaaagctctcagcgcctttctggcctgtggcagctggcagcaagcgctc
tgtgcagcggcccagcttcacttgaccgcagagcagctggctggcctgggcaggactctg
gcaggaaagctagttgagcagaggaaacacagcgatgcagccacagttttggaacagtac
gctcaggaccatgaagaagctgtgctcgtgctgttagaaggagctgcctgggaagaagct
ctgagactggtacacaagtataacagaccagatattatagaaaccaacataaagccttcc
attctagaagcccagaaaaattatatggcgtttctggactctcagacagccacattcagt
cgccataagaaacgtctgctggtggtacgagagctgaaggagcaggcccagcccgtgagc
ctggatgatgaagcaccccacggtccagagtcagatctcttctctgaaaccagcagtgtc
atgagtggcagtaacttgagtggcagatactctcacagtaactctaggatatcagcgcgg
tcatctaagaatcgacgcaaagcggagcggaagaagcacagcctcaaggaggggagtcca
ctggaggatgtggcccttttggaggcattgagtgaagtggtgcaggggactgagaaattg
aaagatgaaatatgccgtattttaaagatgctctttctctttgagtttgatgagcaagga
agggaattacagaaggcctttgaagatactctgcagttaatggaaaggtcgcttccggaa
atttggactctcaccccccagcagagttcagctacacctgttctaggtcccaattctact
gcaaatagtatcatggcctcttaccaacaacagaagacttcagttcctgttcttgatgct
gagctttttatgccaccaaagatcaacagaagaacccagtggaaactgagccttctagat
tga
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