Bos indicus (zebu cattle): 109563599
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Entry
109563599 CDS
T04792
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like domain-containing protein 1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109563599 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109563599 (PNLDC1)
Enzymes [BR:
biu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
109563599 (PNLDC1)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109563599 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
109563599
NCBI-ProteinID:
XP_019822517
UniProt:
A0A6P5CBM8
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All DBs
Position
9:99843827..99870435
Genome browser
AA seq
524 aa
AA seq
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MGYGRPGKNKEELEKPREQKARIREARRPAADVCFSHSLFDLPSEWYLKTRQSVQQFTIC
QIGLSVFSSIEGESNKYVAHSCNFFLFPTTFGVLDSEFSFQASSVQFLNQYGFDYNKFLK
NGIPYMNEEQEKKIKHNILTGNWKVRSSLDKDQIKVVIDEVTRWLDLAEEGXWMTLPGIA
GFQAFEVQLVLRKALPDIWTVLRDQGVIVKKVSTQHRWYLETTSCDRESCWKEKILLSAR
GFSVFFQMLVKARKPLVGHNMMMDLLHLHEKFFRPLPESYDEFKLNIHNLFPVLIDTKNV
TKDIWKELNFPRVSNLSEVYEVLNSDLNPTKNSGPVIIHASRCEKYVETKYPHEAAYDAF
LCGSVLLKVAHLLLWKVHSAVPIPEPSFPLYLDVLAPYVNQVNLIRAGVPKINFAGPDSP
SIRPPILILTVRKWPGVSEQQVYREFQNLCKFDVRRLTRSQFLLMTNKFKDTRSILKEYR
CHPTLRISLYRYWRHSPDINCLLQVCSVITTWAFIAFLLGGAGL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgggttacggacgcccaggcaaaaacaaagaggaacttgagaagccccgagagcaaaaa
gcacgcatcagagaggcccgcaggcctgcagctgacgtctgtttttctcacagtctgttt
gacttgccatcagagtggtatctaaagacccgtcagagtgttcagcagttcaccatctgt
cagatyggattgtctgtgttctccagtattgaaggcgagtcgaacaagtatgtagctcat
tcatgtaacttcttcctcttccctacgacatttggggttttggactcagagttctctttc
caggcttccagtgttcagtttttgaaccagtatggcttcgactataacaagtttctcaaa
aatgggatcccctatatgaacgaagaacaggagaagaaaattaagcacaacattctgact
gggaactggaaagttcgcagctctctggacaaagaccagatcaaggtggtgattgacgag
gtgacgcgctggctggacctggcggaggaaggggamtggatgaccctccctggtattgct
ggcttccaggccttcgaggtccagctcgtactgaggaaggccctccctgacatctggacg
gtgctgagagaccaaggggtgattgtgaagaaggtgagtacgcagcaccgctggtatctt
gagaccacctcctgtgatcgagagagctgctggaaggagaagattcttctctctgcaagg
ggcttttctgtgtttttccagatgctggtgaaagcccggaagcccttagtgggacataac
atgatgatggatctgctgcatctccatgagaagttcttcagacctctcccagaaagctac
gatgagtttaagctgaatatccacaacctatttcctgttctcattgacaccaagaatgtg
acaaaggatatctggaaggaactcaatttcccaagggtttcaaatctctcagaagtttat
gaagtcctgaacagtgacttgaaccccaccaagaactctgggccrgtgatcattcacgcc
agcaggtgtgagaagtacgtggagaccaagtacccccacgaagcggcatacgacgccttc
ctgtgcgggtcagttctgttgaaagtggcgcacctgctcctgtggaaggtacacagcgct
gttcccatccccgagcccagcttcccgctctacctggacgtgctggctccctacgtgaac
caggtgaatcttatccgagccggggtccccaaaatcaactttgcgggcccagactcccct
agcatccgcccccccatcctcatcctcaccgtcaggaagtggcctggggtcagcgagcag
caggtctaccgcgagtttcagaacctctgcaaatttgacgtcaggaggctcacgcggagc
cagttcctgctcatgaccaataagttcaaggacacgcggagcatcctgaaggagtacagg
tgccacccgacactgcggatctccctgtaccgctactggagacactccccggacatcaac
tgcctgctgcaagtctgcagcgtcattaccacctgggccttcattgcgtttctcctggga
ggagctggcctgtga
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