Bos indicus (zebu cattle): 109563871
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Entry
109563871 CDS
T04792
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109563871 (PRDM1)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
109563871 (PRDM1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2HE
zf-C2H2_jaz
zf-met
Motif
Other DBs
NCBI-GeneID:
109563871
NCBI-ProteinID:
XP_019822852
UniProt:
A0A6P5CCJ5
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Position
9:complement(45917471..45940292)
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AA seq
828 aa
AA seq
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MLDICLEKRVGTTLAAPKCSSSAVKXPGLAEGTEGTMKMDMEDADMTLWTEAEFEEKCTY
IVNDHPWDSGVEGGTSVQAEASLPRNLLFKYATNSKEITGVVSKEYIPKGTRFGPLIGEI
YTSDAVPKNANRKYFWRIYSRGELHHFIDGFNEEKSNWLRYVNPAHTAREQNLAACQNGM
NIYFYTIKPIPANQELLVWYCRDFAERLHYPYSGELTMMNLTQTQSRPKQQSTEKHELCP
KSVPKREYSVKEILKLDSHPSKGKDLYRSNISPLTSEKDAEDFRKNGSPEMPFYPRVVYP
IRAPLPEDFLKAPLGCYGMERPPYITHSPISSSTTPSPSARSSPDRSLQSCSPHSSPGNT
VSPRAPGPQEARDSYAYLNAPYGAAAEGLXXXAGYGPPTHLPPAFIPSYNAHYPKFLLPP
YGMNCNGLGAAVSNINGLNSFGLFPRLYPVYSSLLGGGGLPPPVLASASLPSSLPSEGAR
RLXQPEHPREVLVPAPHSAFSLPGAAASLKDKACTPTSGSPTAGTAATAEHVVQPKATSA
AAXAPGGEEAVNLIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRV
HSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGE
KPYQCKVCPAKFTQFVHLKLHKRLHTRERPHKCAHCHKSYIHFCSLKVHLKGHCPVAPAT
GLPLEDLARINEEIEKFDISDNADRLEDMEDNIDMTSVVENEILAVVRKEKEETGLKASL
QRNLGNGLLSGYNLYESTEPSLLKLPHSNPLPLGPVKVKEETVEPMDP
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgttggatatttgcttggaaaaacgtgtgggtacgaccttggctgcccccaagtgtagc
tccagtgctgtgaagkttccagggttggcagaggggactgaagggaccatgaaaatggac
atggaggacgcggatatgactctgtggacagaggctgagtttgaggagaagtgtacatac
attgtgaatgaccacccctgggattctggtgtggaaggaggcacttcggttcaggcggag
gcttccttaccgaggaatctgcttttcaaatatgccacaaacagcaaagagattactgga
gtggtgagtaaagaatacataccaaagggaacacgttttggacctctaataggtgaaatc
tacaccagtgatgcagttcccaagaacgccaacaggaaatatttttggcggatctattcc
agaggggagcttcaccacttcattgatggctttaatgaggagaagagcaactggctacgc
tacgtgaacccagcgcacactgcccgggagcagaacctggccgcctgtcagaacggcatg
aacatctacttctacaccattaagcccatccctgccaaccaggagcttcttgtgtggtac
tgccgggactttgcagaaaggcttcactacccttattccggagagctgacaatgatgaat
ctcacacaaacccagagccgtccaaagcagcagagcactgagaaacatgaactgtgccca
aagagtgtcccgaagagagagtatagcgtcaaagagatcctaaaattggactcccaccct
tccaaagggaaggacttgtaccgctccaacatttcacccctcacttcagagaaggacgcg
gaagacttcaggaaaaacgggagcccggagatgcccttctacccgcgcgtggtgtacccg
attcgcgccccgctcccggaagactttctgaaagcacccctgggatgctacgggatggag
cggccgccctacatcactcactcccccatatcgtcctccacgacgcccagcccctcggcg
cgcagcagcccggaccggagcctgcagagctgcagcccgcacagcagccccgggaacacg
gtgtckccgcgggcccccggcccccaggaggcccgcgactcctacgcctacttgaacgcc
ccctacggggccgccgccgaggggctnnnnnnnntagccggctacgggccgcccacccac
ctgccgcccgccttcatcccctcctacaacgcgcactacccgaagttcctgctgccccct
tacggcatgaactgcaacggcctgggcgccgccgtgagcaacatcaacggccttaacagc
ttcggcctcttcccgaggctgtacccggtgtacagcagcctcttgggcgggggcggcctg
cctcccccggtgctggcgtccgcctcgctccccagctcgctgccctcggagggggcgcgc
cgcctgcnncagcccgagcacccccgggaggtgctggtgcccgcgccgcacagtgccttc
tccctccccggggcggccgccagcctgaaggacaaggcctgcacccccaccagcggctcc
ccgacagccgggaccgccgccacggccgagcacgtggtgcagcccaaagctacctcagcg
gccgctkcggcccccggaggcgaggaggcggtgaatctcatcaagaacaaaaggaacatg
actggctacaagacactcccctacccgctgaagaagcagaacggcaagatcaagtatgag
tgcaacgtctgcgccaagactttcgggcagctctcaaacctgaaggtccacctcagagtg
cacagtggagaacgacctttcaaatgccagacgtgcaacaagggcttcactcagctcgcc
catctgcagaaacactacctggtacacacgggagagaagccacatgaatgccaggtttgc
cacaagcgatttagcagcaccagcaatctcaagacccacctgcgactccactccggagag
aaaccttaccagtgcaaggtgtgccccgccaagttcacgcagtttgtgcacctgaaactc
cacaagcgcctacacacgcgggagcggccccacaagtgcgcccactgccacaagagctac
atccatttctgcagcctcaaggtccacctgaaggggcactgtcctgtggccccggccact
gggctgcctctggaggacctggccagaatcaacgaagagattgagaagtttgacatcagc
gacaatgccgaccggctggaggacatggaggacaacatcgacatgacctctgtggtggaa
aacgagattctggccgtggtcagaaaagagaaggaagaaactggcctgaaagcgtctttg
caaagaaacctgggaaatggactgctctcagggtataacctctatgagtcaacagagccg
tccctcctgaagttgcctcacagcaacccactacctctgggacctgtaaaggtcaaagaa
gaaacagtcgaacctatggatccttaa
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