Bos indicus (zebu cattle): 109563969
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Entry
109563969 CDS
T04792
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03015
mRNA surveillance pathway
biu05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109563969 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
109563969 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109563969 (HBS1L)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109563969 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
109563969
NCBI-ProteinID:
XP_019823030
UniProt:
A0A6P5CBN2
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Position
9:complement(75184991..75270157)
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AA seq
686 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSAVEPVEEYDYE
DLKEFSSSLVNHQLSGIDQARLYSCLDHMREVLGDAVPDDILIEAVLKNKFDVQKALSVV
LEQDKVQNLKVRSEGAISTGKIAKGKSIDSQSSQSESEIVPKVTKMTVSGKKQTMGFEVP
RVTAEENGHSFHTPQKGHSSEDTSLVSSDALESASKSALPSHTIQASEEQSSTPTPVKKS
GKLRQQIDIKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGDVNKRTMHKYEQE
SKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITG
AAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERF
QEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFK
PPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHD
EPVDWAAAGDHVSLTLVGMDIIKINVGCIFCVPKEPIKVCTRFRARILIFNIEIPITKGF
PVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKD
FKELGRFMLRYSGSTIAAGVVTEIKD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggttataactacgatgaagattttgaagatgatgac
ctctatggccagtctgtagaggatgattattgtatttcrccatcaacagctgctcagttt
atttactcacgacgtgacaaaccttcagctgttgaacctgtagaagaatatgattatgaa
gatttgaaagaattctccagttctcttgtgaatcatcagctaagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
atattgattgaagcagttctgaagaacaagtttgatgtgcagaaggctttgtcagtggtt
ctggagcaagataaagtgcagaatttgaaagtcaggagtgagggagcaatatctacagga
aagatagcaaaaggaaaatcaatagattcccagtcatctcaaagtgaatctgaaattgtg
ccaaaagttactaagatgactgtatctggaaagaagcaaactatgggatttgaagtgccc
agagtaactgctgaagaaaatggtcatagtttccatacacctcaaaaaggacattctagt
gaagataccagccttgtttcttctgatgcacttgagagtgcttctaaatcagctcttcca
tcccacaccattcaagcatcagaagagcagagttcaacaccaacaccagtgaaaaagtct
ggcaagctgaggcaacaaatagatattaaagcggaactggagaagcggcaaggaggaaag
cagctcctcaacctagtggtcattggtcatgttgatgctgggaaaagtactctgatggga
catttgctttatcttctgggtgatgtaaacaaaagaactatgcataagtatgaacaagag
tctaaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggcgaa
gaaagggaaaggggggtaacaatggatgttggtatgacmaagtttgagaccaaaaccaaa
gttattacattaatggatgctccaggccataaggatttcattccaaatatgattacagga
gcagcccaggcagatgtagctgttttagttgtagatgccagcaggggagagtttgaagct
ggatttgagactgggggacaaacacgagagcatggactcttggttcgttctcttggagtg
acccaactcgcagttgcagtcaataagatggatcaggttaattggcaacaagaaaggttt
caagagattactggaaaacttgggcactttcttaagcaagcaggttttaaggaaagtgat
gtagcttttatcccaacaagtggtctcagtggtgaaaatctaatcacaagatctcaatca
agtgaactaacaaaatggtataaaggactatgtttattagaacaaattgactccttcaag
cctcctcaaagatctatagataagccttttagactatgtgtatctgatgttttcaaagat
caaggatctggattttgtgtaactggtaaaattgaagctggttatatccaaactggtgac
cgactcctagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcacgat
gaacctgtcgactgggcggcagcaggagatcatgttagtcttacattggttggaatggat
atcatcaaaatcaatgttggctgcatattttgtgtccccaaagaacccattaaggtttgc
actcgtttcagagcccgaatcctcatctttaatattgaaattcctatcactaaaggattt
cccgtgctgttacactaccaaaccgtcagtgaacccgctgttattaaaagattgattagt
gttttaaacaaaagcactggtgaagtcacaaagaaaaagcctaaattgttgaccaaaggc
cagaatgcattagtggagctacagacacaaagaccagtggctcttgagctctacaaagac
tttaaagagctggggagatttatgctgcgctacagtggttctaccatagctgctggtgta
gtgactgagataaaagattga
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