Bos indicus (zebu cattle): 109564101
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Entry
109564101 CDS
T04792
Symbol
PARK2
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04120
Ubiquitin mediated proteolysis
biu04137
Mitophagy - animal
biu04141
Protein processing in endoplasmic reticulum
biu05012
Parkinson disease
biu05014
Amyotrophic lateral sclerosis
biu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109564101 (PARK2)
04120 Ubiquitin mediated proteolysis
109564101 (PARK2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109564101 (PARK2)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
109564101 (PARK2)
05014 Amyotrophic lateral sclerosis
109564101 (PARK2)
05022 Pathways of neurodegeneration - multiple diseases
109564101 (PARK2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109564101 (PARK2)
04121 Ubiquitin system [BR:
biu04121
]
109564101 (PARK2)
03029 Mitochondrial biogenesis [BR:
biu03029
]
109564101 (PARK2)
Enzymes [BR:
biu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
109564101 (PARK2)
Membrane trafficking [BR:
biu04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
109564101 (PARK2)
Aggrephagy
Other aggrephagy associated proteins
109564101 (PARK2)
Xenophagy
Other xenophagy associated proteins
109564101 (PARK2)
Ubiquitin system [BR:
biu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
109564101 (PARK2)
Mitochondrial biogenesis [BR:
biu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
109564101 (PARK2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR_2
IBR_1
IBR
Rad60-SLD
AsnRS_N
Motif
Other DBs
NCBI-GeneID:
109564101
NCBI-ProteinID:
XP_019823225
UniProt:
A0A6P5CC61
LinkDB
All DBs
Position
9:complement(100764744..102042341)
Genome browser
AA seq
482 aa
AA seq
DB search
MKETFLGVQKNSPLLVHFTPSVSLVFVRFNSNHGFPVEVDSDTSIFQLKEVVARRQGVPA
DQLCVIFAGKELRNDWTVQSCDLDQQSIVHIVLRPRRKGPEGHSXRPAWGRSDREPESLT
RVDLSSSMLPADSVGLAVILQDGEESGASSARRPAGRPTYNSFYVYCKGPCQGVQPGKLR
VRCSTCQQATLTLAQGPSCWEDVLIPNRMSGECQSPNCPGTRAEFFFKCGAHPTSDKETS
VALNLITTNSRDISCITCTDIRSPVLVFQCTHRHVICLDCFHLYCVTRLNDRQFVHDPQL
GYSLPCVAGCPNSLIKELHHFRILGEEQYNRYQQYGAEECVLQLGGVLCPGPGCGAGLLP
EPGQRKVSCEXXHGLGCGFVFCRDCKEPYHEGDCGAVIEASGTVTQAYRVDEKAAEQARW
EEASKETIKKTTKPCPRCHVPVEKNGGCMHMKCPQPRCQFQWCWNCGCEWNRACMGDHWF
DV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaacttttctaggtgttcagaagaattcacctcttttggtccatttcactcct
tcagtttcgcttgtgtttgtcaggttcaactctaaccacgggttcccagtggaggtcgat
tctgacaccagcatcttccagctcaaggaggtggttgctaggcgacagggggttccagct
gaccagctgtgtgtgattttcgcagggaaggagctcaggaatgactggacagtgcagagc
tgtgacctggatcagcagagcatcgttcacattgtgctgagaccgcggagaaaaggccca
gaagggcacagccygcggcccgcttgggggcgctctgacagggagcccgagagcctgact
cgmgtggacctcagcagctcgatgctccccgcggactcggtgggcctggctgttatactg
caggacggcgaggagagcggcgcctcgtcagcccgcaggccagcaggtagaccgacctac
aacagcttttatgtctactgcaaaggcccgtgtcaaggagtgcagccgggaaagctcagg
gtgcggtgcagcacctgccaacaagcaacgctcaccttggcccagggtccttcttgctgg
gaagatgtcttaatcccaaaccgaatgagtggtgaatgtcagtctccaaactgccctggg
accagagcggaatttttctttaaatgtggagcrcacccgacctctgacaaggaaacatca
gtagctttgaacctgatcacaacaaacagtcgagacatcagctgcataacgtgtacggac
atcaggagccccgtcctggttttccagtgcacacaccgccacgtgatctgcttggactgt
ttccacctgtactgcgtgaccagactcaatgatcggcagtttgtccacgacccgcagctt
ggctactctctgccttgtgtggctggctgtcccaactccttgattaaagagctccatcac
ttcaggattcttggagaagagcagtacaaccggtaccagcagtacggggcggaagagtgc
gtgctgcagctagggggcgtgctctgccccggcccgggttgtggggcggggctgcttcca
gaaccgggccagcggaaggtctcctgcgagcnnnnncatggcctgggctgcgggttcgtc
ttctgccgggactgtaaggaaccgtaccacgagggtgactgcggcgccgtgattgaagcc
tcaggaacagtcactcaggcctacagagtcgatgagaaggcggcagagcaggcccggtgg
gaggaagcctccaaagaaacaatcaagaagaccaccaagccctgtccccgctgccacgtg
ccggtagaaaaaaacggaggatgcatgcatatgaagtgcccgcagccccggtgccagttc
cagtggtgctggaactgcggctgcgagtggaaccgcgcctgcatgggcgaccactggttc
gacgtgtag
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