Bos indicus (zebu cattle): 109564877
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Entry
109564877 CDS
T04792
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109564877 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
biu03400
]
109564877 (APEX1)
Enzymes [BR:
biu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
109564877 (APEX1)
DNA repair and recombination proteins [BR:
biu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
109564877 (APEX1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
109564877
NCBI-ProteinID:
XP_019824003
UniProt:
A0A6P5CEW0
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Position
10:complement(26060533..26063131)
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AA seq
318 aa
AA seq
DB search
MPKRGKKGAVVEDAEEPKTEPEAKKSKAGAKKNEKEAVGEGAVLYEDPPDQKTSPSGKSA
TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPVELQELSGLSHQYWS
APSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEYDAFVLVTAYVPNAGRGLV
RLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGF
GELLQAVPLTDSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSLLPALCDSKI
RSKALGSDHCPITLYLAL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgtgggaaaaagggagcggtggtcgaagacgcggaagagcccaagactgag
ccagaggcgaagaagagtaaggcaggagcgaaaaagaacgaaaaagaggcagtaggagag
ggcgcagttctgtatgaagaccccccagatcagaaaacctcacccagtggcaaatcagcc
acactcaagatctgctcgtggaatgtggatgggcttcgagcctggattaagaagaaaggt
ttagattgggtaaaggaagaagccccagacatcctgtgcctccaagagaccaaatgttca
gagaacaaactaccagttgaacttcaagaactgtctggattgtcccatcagtactggtca
gctccttcagacaaggaagggtacagtggtgtgggcctcctctcccgccagtgcccactc
aaagtctcttatggcattggtgaggaagaacatgatcaggaaggccgagtgattgtggct
gaatatgacgcatttgtgctggtgacagcctatgtgcctaatgcaggccgaggtctggtg
cgcctggagtatcgccagcgctgggatgaagcttttcgcaaattcctgaagggtttggca
tcccgcaagccccttgtgctatgtggggacctcaatgtggctcatgaagaaattgacctt
cgcaacccgaagggaaataaaaagaatgctggcttcactccacaagagcggcagggcttc
ggggaattgctgcaggctgtgccactcactgacagtttccggcatctctaccccaacacc
gcctatgcctacaccttctggacctatatgatgaatgcgcgatccaaaaacgttggttgg
cgccttgattattttttgttatctcagtctctgttgcctgcattgtgtgacagtaaaatc
cgttccaaggctctgggcagtgaccactgtcccattaccctatacctagctctgtga
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